EMLSAT00000001111, EMLSAT00000001111-696958 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001111
Unique NameEMLSAT00000001111-696958
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1186supercontigLSalAtl2s1186:117586..119588 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001111 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001111EMLSAG00000001111-683877Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000004859EMLSAE00000004859-713787Lepeophtheirus salmonisexon
EMLSAE00000004860EMLSAE00000004860-713788Lepeophtheirus salmonisexon
EMLSAE00000004861EMLSAE00000004861-713789Lepeophtheirus salmonisexon
EMLSAE00000004862EMLSAE00000004862-713790Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto772579auto772579Lepeophtheirus salmonispolypeptide
EMLSAP00000001111EMLSAP00000001111Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001111

>EMLSAP00000001111 ID=EMLSAP00000001111|Name=EMLSAP00000001111|organism=Lepeophtheirus salmonis|type=polypeptide|length=414bp
MDHSSSSQGGSSKSGLRPNYSLKFTLAGHTKGVSAVKFSPNGEWLASSSA
DKLIKVWGSYDGKFEKTISGHKLGISDVAWSSDSRLLVSASDDKTLKIWE
LSSGKCLKTLKGHSNYVFCCNFNPQSNLVVSGSFDESVRIWDVRTGKCLK
TLPAHSDPVSAVHFNRDGSLIVSSSYDGXCRIWDTASGQCLKTLIDNDNP
PVSFVKFSPNGKYILAATLDNTLKLWEYSKGKCLKTYSGHRNEKYCVFAN
FSVTGGKWIVSGSEDNMVYIWNLQTKEIVQKLQGHTDVVLNFELLFPESW
GSSHFPPSSSFAESDLMYFHHYRSHYLWILNLWLGNHLFEVRLWVESNLR
NQIRIPFNQKPKLSSNTKPASLSLYLFLDLSPQRPLSSCRRSEYRLDDTT
SSFPSEDSFLSSLD
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mRNA from alignment at LSalAtl2s1186:117586..119588-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001111-696958 ID=EMLSAT00000001111-696958|Name=EMLSAT00000001111|organism=Lepeophtheirus salmonis|type=mRNA|length=2003bp|location=Sequence derived from alignment at LSalAtl2s1186:117586..119588- (Lepeophtheirus salmonis)
ATGGATCACTCTTCTTCTTCTCAAGGAGGCAGCAGCAAATCCGGACTACG ACCCAACTACAGTTTAAAGTTTACTTTGGCAGGTCACACCAAGGGTGTCT CAGCCGTGAAATTCAGTCCGAATGGCGAATGGTTGGCCTCTTCTTCGGCG GATAAATTGATCAAAGTTTGGGGCTCCTATGACGGAAAATTTGAAAAGAC AATATCCGGTCATAAACTGGGAATTTCGGACGTAGCTTGGAGCTCTGACT CTCGACTCCTTGTGTCTGCATCTGATGATAAAACATTAAAAATCTGGGAA CTTTCCTCAGGGAAATGCCTCAAGACCTTAAAAGGTTCGAATCCCAAATT GAGAGAGAAAAAGCAATTCACTATCTCAGTGTATTCATTCACGTTTGTTT GTTTGTTTTCAGGTCACTCCAATTATGTATTTTGTTGTAACTTTAATCCC CAAAGTAATTTGGTGGTCTCTGGCTCCTTCGACGAGAGTGTTCGTATTTG GGATGTGCGTACCGGTAAATGCTTGAAAACACTTCCAGCTCACTCAGACC CGGTCTCTGCAGTTCATTTTAATCGAGACGGATCTCTCATTGTTTCCTCT TCATATGATGGCTTKTGCAGAATTTGGGATACAGCATCAGGTCAATGTCT CAAGACTCTGATCGACAACGACAATCCCCCTGTTTCTTTTGTAAAATTCA GTCCCAATGGAAAATATATATTAGCAGCAACATTGGACAATACCCTTAAA TTGTGGGAATATTCCAAAGGAAAATGTCTTAAAACCTATTCTGGGCATCG AAATGAAAAGTATTGTGTTTTCGCAAATTTTAGTGTCACGGGTGGAAAGT GGATTGTATCAGGCTCAGAGGACAATATGGTTTATATTTGGAATTTACAA ACTAAAGAAATTGTCCAAAAATTGCAAGGACACACTGATGTCGTTTTAAG TACCGCTTGTCACCCAACTGAGAATATTATAGCGTCCGCTGCACTCGAAA ATGACAAAACCATTAAGCTTTGGAGAAGTGACACATAATATTTATTTATA GAAACAAAATACAAATTCATCAAATGATTATCATTTTTAATACATTTATT AAATATTTTGGATATATGATGTAATACAAACATGTGTTGGGTATATTTAC AAAATATATATATAAGGTTGACGCACTGTAATACAAGTTAAAAGATCCTC TTGGAAATGTCGTACATCAAATTAGTAAGGCATGTTTAACCTAAGACAGT TAAAATGATTTCTTTTGAYGCAAACTAAACTCCTAATTTACAAGAATCCT CCAGACCCGAGAAAAATATCAACGTATCAATCATAACGTAACACGTCAAA TCATTTTCCTCTACTTATAAATGAGACACACATTAAGAAAAGATACAAAC TTCGAAAACCAGATCTTTAAAAATAAGACCATTGTTGTTAATCATTGCTC TCTTTTCTCTCGGTACGACGAAAACGTGCCCCACCACCTGCGTAATATTG TTTATGAGAATATTTCTTAAAAGACTTTGAGCTCTTATTCCCTGAATCCT GGGGCTCGTCACATTTCCCACCTTCATCTTCTTTCGCAGAGTCTGACTTG ATGGTTTGAGAACTGAATTTCCCCATACCGGGTCTATAAATTTGTATTGC AGGTCGCTCTTTGTTTTTTATTCTCTCTGTGTTACTTCTTTTTGAATTCT TGGACTTAGTATTTCCACCACTATCGTTCTCATTATCTTTGGATCCTGAA TTTATGGCTGGGAAATCATCTTTTTGAAGTACGGTTATGGGTTGAGAGTA ACCTAAGAAATCAAATACGAATTCCATTCAATCAAAAACCTAAATTGAGC AGTAATACCAAACCTGCGTCATTATCCTTGTACTTGTTCCTTGATCTCTC ACCCCAACGACCTCTATCGTCATGCCGTCGATCTGAGTATCGCTTAGATG ACACTACTTCTTCCTTTCCTTCAGAGGATTCTTTTTTATCCTCTCTAGAC TGA
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