EMLSAT00000001116, EMLSAT00000001116-696963 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001116
Unique NameEMLSAT00000001116-696963
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1186supercontigLSalAtl2s1186:32429..36877 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001116 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001116EMLSAG00000001116-683882Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000004885EMLSAE00000004885-713813Lepeophtheirus salmonisexon
EMLSAE00000004886EMLSAE00000004886-713814Lepeophtheirus salmonisexon
EMLSAE00000004887EMLSAE00000004887-713815Lepeophtheirus salmonisexon
EMLSAE00000004888EMLSAE00000004888-713816Lepeophtheirus salmonisexon
EMLSAE00000004889EMLSAE00000004889-713817Lepeophtheirus salmonisexon
EMLSAE00000004890EMLSAE00000004890-713818Lepeophtheirus salmonisexon
EMLSAE00000004891EMLSAE00000004891-713819Lepeophtheirus salmonisexon
EMLSAE00000004892EMLSAE00000004892-713820Lepeophtheirus salmonisexon
EMLSAE00000004893EMLSAE00000004893-713821Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769965auto769965Lepeophtheirus salmonispolypeptide
EMLSAP00000001116EMLSAP00000001116Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001116

>EMLSAP00000001116 ID=EMLSAP00000001116|Name=EMLSAP00000001116|organism=Lepeophtheirus salmonis|type=polypeptide|length=715bp
MVVLQNTFLILGFIYLGTNAQISFPGSSGNFANSENRGNINNVNAFNVRE
TAQRSQTCPANVAANPLLRTASFSTSDRFPVTVLRSANQIPESSSAFFHN
GHQAPKAGALLSSKIALTGLQSARESFVLPFENGQCTTRTENIVFDQNCP
RSPRCNPNEKYRNPRGLXNNXRQPLFGAVFTPVQRILRNAYFDGFEIPRR
DSNGSPLPSARLVSTSITRKNKNTASQYTNILMSMGQFLDHDLVHVPVHR
LDNGDTIDCCSTRFGNNSLQCFPISIPRGDISFGSRTCINFVRSLSAPDL
DCNPGPNEQLNQLTHWIDGSNIYGSTQEETNKLRSFRGGKLRMKRSSLLP
EDNENEECVDEFECFLAGDSRVNEQLTLAVMHTLWVRQHNKVADELSQFN
PFWNDETLFQEAKRIVSAQWQHVIFNEWLPVXLGPTMMESFGLWTLRRGF
SFDYRNDFDPRITNEFAAAGFRVGHTLIPSFLKAYSLISSRLTRRWQLRS
IFNDPGVLETPGVFDEVALGMVIQNVEDFDNSFTEEITDHLFERNGDGLD
LIALNIQRARDHGIPGYVRYREICGLGRARTFEDLGSNISRRKIAQLKSI
YKSVDDIDLFIGMTLEDKFRDAFIGRTFLCIISDQFARLKKGDRYFYDLS
NQAGSFTSAQLDEIRKFSLSRLICDNTNIKEIQPLALEQPDNIYNILTPC
RSSAIPKTNLFPWTV
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mRNA from alignment at LSalAtl2s1186:32429..36877-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001116-696963 ID=EMLSAT00000001116-696963|Name=EMLSAT00000001116|organism=Lepeophtheirus salmonis|type=mRNA|length=4449bp|location=Sequence derived from alignment at LSalAtl2s1186:32429..36877- (Lepeophtheirus salmonis)
ATGGTTGTCTTACAAAACACTTTTCTCATTTTGGGATTCATATATTTGGG
TACTAATGCCCAAATATCTTTCCCTGGAAGCTCTGGAAACTTTGCCAACT
CTGAAAACCGTGGAAATATTAACAATGGTATGTACCAATTTACATATTTT
GGCTTTCGAGTCTGTCATGGATTAGTGTGTACAATGTAAATAGATACTTT
GTTAAGGTTTAAAAACATTTTTTCCCCCTATTGAAAATTAAATATTGAGG
TTCAAAGGGTGCAGAAATCAATTCATTAGTGTAAGGCCAGTCTTTTTAAA
AAAAAGATGTCACATATTGATAACACCTCATGATCTCCCAACTTTTCATT
GTTATTTTTTTTCAAAAGGTCAGAAGCCTAAGCATTTGCCCCTTCACTCC
CAAATCCAGCACTTATAATTAAGGCTTGAGTATTTACTTAGTTAATTAAA
TTTTATTTTAGGTGGCCGTAATCGTGGATGCCAATCTGGAGTTTGCCAGC
CTGTCGTTGATTGTGCTGGAAGAATGACACTCTCTGAGAGATCCTTTAAC
AAATGTACATTAGAAAACTTTCAACCGGGGTTATGTTGTCGTCTTCTATC
AAATAGAGATGGTAAAAATGATATTCTTTACTGCTAACTAATTTTGCATT
TGAATTTTTTGTTTAAATTGTGTCTTTCAGTAAATGCATTTAATGTAAGA
GAAACAGCTCAAAGAAGTCAAACATGCCCTGCCAATGTGGCAGCCAATCC
ATTGCTCAGAACTGCATCATTTTCTACAAGCGATAGATTTCCTGTTACAG
TTCTCCGATCGGCAAATCAAATTCCAGAAAGTTCTTCTGCTTTTTTTCAT
AACGGTCATCAGGCTCCAAAAGCAGGGGCTCTTCTTTCCTCAAAAATTGC
TCTCACAGGACTCCAATCTGCAAGGGAATCATTTGTTTTACCTTTTGAAA
ATGGACAGTGTACTACTAGAACTGAAAATATAGTTTTTGATCAAAATTGT
CCACGAAGCCCAAGATGTAATCCTAACGAAAAGTATAGAAATCCCAGAGG
ACTGTGMAATAATCYCCGCCAGCCTTTGTTTGGTGCTGTTTTCACACCAG
TTCAACGAATCCTTCGAAATGCCTACTTTGATGGTAAGTTCACTAAACCA
ACGACTTGTTCTTAATAATCATGGTAAATATAGCAATTCCAAGTTATAAG
TTCACATTTATAAAATTATATTTGTATGTAAGAGTAATAATCAATGCACT
TTTTTTCAATGTTTCAGGATTTGAAATACCAAGACGAGATTCAAATGGAA
GCCCACTTCCATCAGCTCGACTCGTATCAACTTCTATCACACGAAAAAAT
AAAAACACAGCTTCTCAATATACTAATATACTAATGAGTATGGGTCAGTT
TCTAGACCATGACTTAGTTCATGTTCCTGTTCATAGACTAGACAACGGAG
ATACGATTGATTGTTGTTCTACAAGGTTTGGAAACAACTCTCTACAGTGT
TTTCCCATTTCAATCCCTCGTGGTGATATATCCTTCGGTTCACGTACCTG
TATCAATTTTGTTAGATCCTTATCTGCTCCTGACCTAGATTGTAATCCCG
GGCCCAATGAACAAGTAATACTTTCAAATTTCCCTATCAATTAATTTAAC
AATTTTTTTTTTAGCTGAATCAATTAACTCATTGGATAGATGGCTCAAAT
ATTTATGGTTCGACCCAAGAAGAAACAAACAAGCTACGATCATTTAGAGG
AGGTAAACTTCGTATGAAGAGAAGCTCCCTCCTTCCAGAGGATAATGAAA
ACGAAGAATGTGTTGATGAATTCGAGTGCTTTCTAGCAGGAGATTCTCGT
GTAAACGAACAATTAACTCTCGCCGTTATGCATACTCTTTGGGTTCGTCA
ACACAATAAAGTCGCAGATGAATTGTCTCAATTCAATCCGTTTTGGAATG
ATGAAACTTTATTCCAAGAAGCCAAGAGAATAGTATCAGCTCAATGGCAG
CATGTAATTTTCAATGAATGGCTTCCAGTAAWGTTGGGCCCAACCATGAT
GGAATCATTTGGTCTTTGGACTCTTAGAAGAGGATTTAGTTTTGACTATA
GAAATGATTTTGACCCAAGAATTACTAATGAATTTGCCGCAGCTGGTTTT
CGTGTTGGACATACTTTGATTCCTAGTTTTTTAAAGTAAAAAAAAAAAAT
GAGTACATAATAGAAATACATATTCAAATATTCCTTTCAGAGCTTACAGC
CTTATTAGTAGTCGCCTTACTCGAAGATGGCAACTTAGATCTATTTTTAA
TGATCCTGGAGTCTTAGAAACCCCTGGTGTGTTTGATGAAGTTGCTCTGG
GAATGGTTATTCAAAATGTTGAAGATTTTGATAATAGTTTTACTGAAGAG
GTAATTAACACCATAACAATTCGGAATACCCCTTAGATATTTTTTATCCT
ATTTTAGATAACAGATCATTTATTCGAAAGGAATGGTGACGGTTTGGATT
TAATTGCATTAAATATCCAAAGAGCTAGAGATCACGGTATTCCTGGGTAT
GTAAGATATAGAGAGATTTGTGGACTAGGAAGGGCTCGTACTTTTGAAGA
TCTAGGTTCTAATATTTCTCGAAGAGTAAGTAAAAACTTATTTAAAATAC
AGCTTTCACTAATATCAATATAATTAATCAATTAGAAAATAGCTCAACTT
AAAAGTATCTACAAAAGTGTTGATGACATTGATTTATTTATTGGAATGAC
TTTGGAGGACAAATTTAGAGATGCATTTATTGGAAGAACATTTTTATGCA
TAATTAGTGATCAATTTGCACGATTAAAGAAAGGAGATCGATACTTTTAC
GACTTGTCAAATCAAGCTGGTTCTTTTACATCAGGTAAGGAATGATTATT
TTAACCTCACAATTTTCTGCACAATTTTTGTACTAGAAAGTTGTTGAGCG
TAATTATAATTTCAAATTATTAACTACGGAGTATGTATTCAAAAACATTT
ACAAAGGCGTACTCCAGTACTGATTGATCAGTGTTTTATACTCGTGTACA
AAAAAAAAAAAAAGAAGTAGTCAATCTTCTTCATAATTAATTGCTTTGAA
AAAATGTGGGCCTTTATTAATATTATGATGCAAAAACATTTTATAGTAAA
GATTCTTCATGTATTACAAAATTTAGTAATGATGTATTTATTCATTAAAA
AAAATATAGGTACAAAAACTTAACGTACATTTGTTTGTTTTTTCCCTTGT
TAAATCACTCCTACGAATATGTATATAGCATGTAGAGTTGCAATCTCAAA
CCAATGTTGCCAGTGAGATTTTACAATGCTAACAGCAGTGATGAAAATCT
GTTTTTTGGAATTGGTAATCTGAAAAATATGTTTTCTTTTCCAGAGCAGT
TGTCGTTATTATTTAATTCCTGAGTAGTGAACATCCTTTCCTAAATAAAT
TTAATTATTTTTAAAGCCTGATTGAACAATAAACAACACTCTTGTGGGCT
CATAAAAGACGGAGCGTAACACTGATGATTTGTTGCGGAGGTATAATTGT
AAGTCCTTTATGGACTCAGAGTAGAATTGGGGATCGACGTCCGAGTAATT
CTAGCAATATATCCTTTTCTCCTTCCTCCCTTGCTAAAACATATTTTAGC
TCATCTAATGAAACTTCATGAGCATTTTTCTTTATCTCCTTTAAAACATT
TTTCAAATTGTCAGGGTTATCATGTTAATCTCGTTTTTTTTAACATGCCC
ATTCTGCATTAGTTATAAGTATTACTGTCATTTACTCGGCTTGCTTGAAC
TATATTTAGAGTTTACTAGAAAATTGATATACAATCGGTTTTATCCGATA
AATCACTGGCGATTAATCGGTATTTGGCGAATTAGCTTATCTGAGCATGA
TTTATATTAAAGCAACATTTCTATATTTTACTATTCAATTAGAGTGTATT
TGTATGATTATTTTAATAAGCTCCATTTTTTGAATTTTCGGATACGTATA
AAATAATAGGCATTAGGAAATGACTATTCATTTATAATAAGTAACTGATC
GACATTAATCATTATGTACGAGTATAACTGGAAAAATAAACAAGTTTTTT
GAATGTAGGATCCTCACGGCATGTTATTTGTTTCATATCATTAGACATAA
TAAATGTATGTTAATGTAAAAAGTATTAATTCGTATTTGTTTCTTAATTT
AGCCCAATTAGACGAAATAAGAAAGTTCTCTCTCTCAAGACTCATCTGTG
ATAATACAAACATAAAGGAAATACAACCTTTGGCGTTGGAGCAACCGGAT
AACATATAGTAAGACCGATTGATAAATGAATTATTATGATTATATTTTGT
CAATTCATTATTTTTCTTTTCTTTCTCATTAGCAATATCCTCACTCCATG
CAGATCCTCTGCCATTCCTAAAACAAATCTTTTTCCATGGACTGTTTAA
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