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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s1194 | supercontig | LSalAtl2s1194:247757..252797 - |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000001172 >EMLSAP00000001172 ID=EMLSAP00000001172|Name=EMLSAP00000001172|organism=Lepeophtheirus salmonis|type=polypeptide|length=270bp
MSYILCNIVRPINQDKXAXAVADSTTSAPPTDSPKVIFRGNFPGTKTTDF
NQWPNLDFEDMDSTLAVQQYIQQTIRRDVSXVEAILKSPETQDEGVWKYE
HLRQFSMELNGLAVLLQGECNPKMCTQMXATEQWIFLCAAHKTPKECPAI
DYTRHTLDGAACLLNSNKYFPSRISIKECFVAKLASVCRRVYRIFSHAYF
HHRVLFDAFEAETHLCRRFTTYVVKYDLMAKEVLIIPMLDSVDVAQPTPI
STSPPSFTPLATLPKSESEA back to topmRNA from alignment at LSalAtl2s1194:247757..252797- Legend: polypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000001172-697019 ID=EMLSAT00000001172-697019|Name=EMLSAT00000001172|organism=Lepeophtheirus salmonis|type=mRNA|length=5041bp|location=Sequence derived from alignment at LSalAtl2s1194:247757..252797- (Lepeophtheirus salmonis)
ATGAGGTAAAATATGTAGACACAGTCATCAACTTGTTCATTACCAGAAAT
GCGGATCAACTTGAGGCATTTTGACGKCACCAACACCGCCTCCGAGACGT
CGATAGTTCATGGAACCACATATTTTCCAATTGTTATTCGCTTCTTGATC
AAATACCTCCACTGTTTTAAGATAGGTTGTACCATCAAATCCTCCCACAG
CATAGAGTTGACCATTCACAACGGCCAGACCCACCTAGTAAGATAAAAGT
CAAGATCATTAGTTGTTCGAAACCTTATATGATATGTGGTGCTTGAATAT
AGAAACAATCTAGAACAGGGGTCGGCAAGCTATGTAGTGCCATGGCAGAG
GGCCAATCAGCTATCGCTGCAGTCATGGTGAAAACCATGTTATTGAATAT
GTAATTAATTTTCTGTGTGCTTAGAGAAAACAAGGATTCAATATAATTTA
TTTAAACAATAACTTTATTTTTTACTACAGGAATTATTATAAAGAAATGA
AAAATAATAAGACAAAAATATCATGATAAGATAGTGGGCAGGCCAATAAG
GCCCGCAGGTCGGGGGTTACCGACCTCTGATCTAGAACAAAAATCAAAAA
AATGAAGAAAGWGTAAAATTCATTTTTTTTTGTATCAAGGTTAATAGTCA
AAAAGGCGATATATAGCTATTCTTGGTAAGAGATATACTCTTTGACGTCA
CTATGAAAAAGCGTGGTGGAAGTCAAACATCAGGCGGAAAAGTGTTATGG
TATAACCTTGTATTTCTATTAACCTTGATCTATATTAATAAAGAAAAGTG
TATCTGCCTGTTTTATTATGACATGAAGGCTCATTCAATCACAAGCGTTT
GTAGTAAGCTAAAGCTCATACTATGTGACTAATATATAGTGATAAAAATT
GAGTGTCTTGGGCATGTAAAAAAAAAATACAACACCGTCACCCGACATTT
TGGAGCATATTTTGGAGGAGAGCAGCTGTGACAAACAGMTGTGACGAGGG
AGAAGGAAATAAACAAGGACATTTCCGTCAATTKCTCTTATCTCGATCCC
ATTTCTACTCTGAGTCTATCAAAGACTTACAAGTAGCCGAAAAGGAAGTT
CACAGCTCAGGAATTAGATAATAATGACAATAGCTTTGCAAAAGAAAAGT
TATTCTTCAGATTCTCAAAAAAAAAACAAAAAAAAACGACACGATTTACG
TCACTTTATATTTTGCCTTCCAAATGAATACGCACTTCGTGTTCATGATG
ACGTTCGAGGCTCAAAAACAAGTTTTAGAAGAAAAAAAAGTTTGTTTAAC
AACAAACAAAGATAAACAATGCGTTAATCTTATGCACTAAACAGAATTAA
AAAATATATAACAGTCTATGAGAAATATGTAGTTAAAGTTTCTATCCTAA
GTCTTATGGATCACCCTGTATATATTAAGTAAAATCATAAATTGGGATTT
TCTATAAATTTGTTCCAGATTGTTTTTATGTAGACACACCGAATATGTAT
GCCTATGTCCCTTCCCTCTTAAGATAATGGAGACGCAAAAGAGAGGGAGA
GAGATTAGATTAATTGTGTAGCTTAATTATATCGTATTTTATTTTATCAT
TGAAATCCTTCATTTGGCTGTTTTTTGGGGGGATTATTTGTTGTTAATTG
GAGGAAGTTTCAACATTTTTTCACACTCATCGTTTACTTTTTCCGAGAGT
AAGAATATATTTCAGTTTTACCTCTTTTTTTCATTTTTATATGTTTCAAT
GAAATCGGTTAAATTTTTATAAAAATAGCACGCAGCTGTCATTAACTTCA
TCATTATGGTATAATATTTTGGTTGAAAAGCAATTTATACTTCAATGTTA
TGACTTTATTATTTAAATTATAAGAATTAGTGTAAAGACTCGGTCCCAGA
CCGAATGTTTTTTCTCGGTTCGGTCTTTAGTGATTTTTCCTAAGCCGATT
TCTTCGGTCACAATCTTTTTACCAAATGTTTCCCCTATCCACCATAGTAT
AATAAATTATATAACTAAGTAAAAAATAATCTAATAGGTCAAGTTAAAAA
TTCTGAGCGTTTTTCGCTTTCTTTTGACAATTTAATTAAAATTAACATTC
CGGTCCAACTAGACGATTTTGATTATTTTATCAACWTTTTCGATCGTGCC
TCATATTATTAGAACGGAATCGCTGTAACCACCACTTTGCTGTTGCATTC
GATAGTGTATTGAGTCCATACACAGCACATTTTTTTTTTTTTTTGCCGCC
TGTTCCSCCTTTTTACCTTGGCTGTTGCAATACTGAAGAATGTATCAAAT
TTTCTCAATTTTTTGCTTCCATTTTGGAACGCTGTAAAAACATGTTTTTT
TTGTTTGTTTTTTTGCAAGATATGTGCAATGCTTTTAATACAAACCTCAT
ATCTTATTTGGCTTAATAAGCTATCGACATTTTTACGGAAAATTGCAAGA
AAAGACACTTAAGTACCCGTACTGAATTAGACTTGACTAGACTGAATTTA
ATTAGAACCGACACAACATAAATCTAAGATATACAAAATTTTGGAACACA
AATGACGGCATTAAAAATTCATCGATTGAATCGGTATAGACATAATTTTA
TATGAGAGCAATTTTTGTTGTTGTAAAACAGATTCCTATACTGTATTTTT
CTCAAAGATGAGATCAGAACCAACTTTTTTAAAGGGCTAAAATAGTAAGT
CCTTTAAAGATAATAACGATCTTGGACGGGTCCAGGATTTTCCGACCAAA
ACACAACACTAATAACCAAATACATTTGTTTCTTAGGTACTATAAATATT
TTGGTCGTGACTATAGCAAAAAAAAATAAAAAAATGGACGGTTCAACTGA
GGAATCAAGTGAGTACAAATTTAGATTTCTTTTTTTTCCATACTATGCTA
AAATAGTATGAAAATACATAAAGACTAATTGCTAATATCTACATCATTAG
CATAAATTAGATTATAGTTAAAAGGATTAAAGAAAGTTAATCCTATAAGA
AGATGTAGATCGAATTATAAAAAACGGTTTATTTATCTTGATAAAAATCC
GGTATATATACTGGCTAYCCCGGGTGTTTTTTTGTTTGTTTGTTTTTTWG
AATTGATAATCTGAAGAATGAATTTATTTTCCTCAGCTGTCGTCATTATT
ATTTAACTCCTTAATAGTACTTCTTTTCATATTACATTCAATTATATTCA
AAATCTGATTGAATGTTCGACAAAATATTTTTCTCATAAAAGATGGGGAG
TAACCTTGAAATTTGTTGCAGACTTAATGGACTCAAGAGTAGAATTGAGT
CTCAACAATTTGAAGAGTGTTTTAGAGGAGAGAAGGTATAATGCCCATGG
CGTTTCATTAGATCAGCTACAATCAGCTCTGACAAGAGAGGAAGGAGAAA
ATGATGTAAGCAAGGACATGCTGCTAGAATTACTCCGATGTTGATACCCA
ATTCTATTCTGAGTCCAACAGGGACTTACAATCATAACTATGCAACAAAT
CCTCAGGATTATGCTTCGTCTTTTATNAGGACATGCTGCTAGAATTACTC
CGATGTTGATACCCAATTRTATTCTGAGTCCAACAGGGACTTACAATCAT
AACTATGCAACAAATCCTCAGGATTATGCTTCGTCTTTTATGAGCACACA
CGAACGTTCAAACAGATTTTGAATATAATTGAATCTATTTAGCAAAGGAT
GTTCAATACTCAGTAATTAAATAATAATGGCAACTACTAAGGAAAAGAAA
ATTCGTTCTTTCAATTACTATCAATTACAAATTAACTGGCCAGCTAAAAA
ACACACCGGATTTACATGATTGCTTATAGCATACCCGGTCCGCGACCAGT
CCTATCTCTACTCTCAGCTTATCTAATAAAACGTCATGACAGATGAGCTG
TTTTTCTCCCAAACATTCTTCAAATTGTTAGGATTACAATGATAATACTT
CATTTCTTCTTTTTGAGCCCCACTGGTAGGTCATATTATTTACAACCATA
AGACGTATAACATCTCTATTTTGTAGGAAGAACCATAATTGTTAGGTTGC
GTGGATAAATGTTCTTTCTTTTCTCTTTTCCTCTCTTGCTCATCCATCTA
TTACTGCAGCTGGCCGGGTCGTGTAACTCTCCTCTTCTTAATTCTCTGTA
TATAATAATAGTCCAGTGGTTATGTAGAAATAAGGAGGTTGTCAAAAACA
CACAACACATTCATTCACAATAATATAATTTAGCTATATCCTTTGTAATA
TTGTAAGACCAATCAACCAAGATAAAAMGGCASSAGCCGTCGCGGATTCC
ACGACATCAGCACCTCCCACGGATAGCCCAAAGGTAATTTTCCGTGGAAA
TTTCCCTGGAACTAAAACTACAGATTTTAACCAATGGCCGAACCTCGACT
TTGAAGACATGGACTCTACTTTGGCTGTCCAACAATACATACAACAGACG
ATTAGAAGGGATGTCTCTGKCGTTGAAGCCATTCTTAAGTCTCCCGAGAC
CCAAGATGAAGGGGTTTGGAAATATGAGCATTTAAGACAATTTTCCATGG
AGTTGAATGGGCTCGCCGTTCTTCTCCAAGGAGAGTGCAATCCGAAGATG
TGCACGCAAATGKCAGCCACAGAGCAATGGATCTTCCTTTGTGCCGCACA
TAAAACTCCCAAAGAATGTCCTGCCATTGACTACACCCGGCACACCTTGG
ATGGTGCGGCCTGTCTTCTCAACTCCAATAAATATTTTCCATCTCGTATT
TCCATCAAAGAGTGCTTTGTTGCCAAACTAGCTTCTGTCTGTCGACGGGT
TTATCGCATCTTTAGCCACGCTTACTTCCATCATAGAGTACTTTTTGATG
CCTTTGAGGCAGAGACACACCTCTGTCGTAGATTCACTACCTATGTTGTT
AAATATGATCTAATGGCAAAAGAAGTTTTAATTATACCAATGCTTGACAG
TGTGGATGTCGCACAACCCACTCCCATCTCCACATCACCGCCCTCTTTTA
CKCCCCTTGCCACACTTCCCAAATCAGAGTCTGAAGCCTAA back to top
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