EMLSAT00000001605, EMLSAT00000001605-697452 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001605
Unique NameEMLSAT00000001605-697452
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments
Table of all RNA interference experiments conducted using this feature, grouped by Phenotype CV: -Missing-
Gallery Image Title Gene or target symbol Sex/Stage Phenotype Datesort descending
I F65 CL3092 female
  1. PreAdult2
 -Missing-
-Missing- 		18.01.2013 - 11:00
28.02.2013 - 00:00
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s127supercontigLSalAtl2s127:501702..502235 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001605 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001605EMLSAG00000001605-684371Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000007024EMLSAE00000007024-715952Lepeophtheirus salmonisexon
EMLSAE00000007025EMLSAE00000007025-715953Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778219auto778219Lepeophtheirus salmonispolypeptide
EMLSAP00000001605EMLSAP00000001605Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001605

>EMLSAP00000001605 ID=EMLSAP00000001605|Name=EMLSAP00000001605|organism=Lepeophtheirus salmonis|type=polypeptide|length=155bp
MSARLIDQLTQGFGVRPSLRVKRALFGPVDHEENVRFVQRELARNREEAS
QRWNYDFSRDVPLPGRYEWEVPSLNTLVEPLVSHTCDKDQRRARKTSQQM
HITDYLQHRKQRSKSKVKVQERKRTPSTPKTRSTDEKESPTNTTKESSKP
KETVA
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mRNA from alignment at LSalAtl2s127:501702..502235-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001605-697452 ID=EMLSAT00000001605-697452|Name=EMLSAT00000001605|organism=Lepeophtheirus salmonis|type=mRNA|length=534bp|location=Sequence derived from alignment at LSalAtl2s127:501702..502235- (Lepeophtheirus salmonis)
ATGAGTGCTCGTTTAATCGATCAACTAACTCAAGGATTCGGGGTCCGGCC
TTCACTGCGTGTGAAACGCGCCCTCTTTGGCCCCGTGGATCACGAAGAAA
ACGTTCGCTTCGTACAAAGAGAACTTGCTCGGAATCGCGAAGAAGCGAGT
CAGAGATGGAACTACGACTTTAGTCGAGATGTTCCTCTACCAGGGCGTTA
CGAGTGGGAAGTTCCTTCCCTGAACACGCTCGTGGAACCTTTAGTCAGTC
ATACCTGTGATAAAGACCAAAGACGTGCTCGAAAAACTTCCCAGCAAATG
CATATCACGGGTAAGAGGAGAGGGAATGACTCCAACACTGCTGTGTACTT
ACTTTCCACACATCTTCTCTTTATAGATTATCTTCAACATCGGAAGCAAC
GCTCCAAATCCAAAGTCAAGGTTCAGGAGCGGAAAAGAACGCCTTCCACC
CCCAAGACACGTTCCACGGATGAGAAAGAATCCCCAACAAACACAACCAA
GGAATCTAGCAAACCTAAAGAAACAGTCGCATAA
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