EMLSAT00000001825, EMLSAT00000001825-697672 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001825
Unique NameEMLSAT00000001825-697672
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1314supercontigLSalAtl2s1314:155107..157706 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001825 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001825EMLSAG00000001825-684591Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000008048EMLSAE00000008048-716976Lepeophtheirus salmonisexon
EMLSAE00000008049EMLSAE00000008049-716977Lepeophtheirus salmonisexon
EMLSAE00000008050EMLSAE00000008050-716978Lepeophtheirus salmonisexon
EMLSAE00000008051EMLSAE00000008051-716979Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto773463auto773463Lepeophtheirus salmonispolypeptide
EMLSAP00000001825EMLSAP00000001825Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001825

>EMLSAP00000001825 ID=EMLSAP00000001825|Name=EMLSAP00000001825|organism=Lepeophtheirus salmonis|type=polypeptide|length=465bp
MSIPEFLGGFTINLAFITNGFALAYPTIALSQLTNNGTESCSFVMSKEEG
SWFAGLLGIGGICGSVFFGTLIGQRIGNRKTLLLAAILDIIGWLLIAFAV
NSPMMMGGRFLNGVFVGTIGPSGYTFLSEIMHRKHRASCSQATSVAISAG
MLVTYGLGSVISWNLLAIGCGISSVLFFIMLLTMPDSPYWNASIGKIEEA
KKSLSHFRSKKDDVEEEFKEIMEGIQKSIKKEKISFFEAMKLLFTDETCY
KPFIILSVLFLIQTLSGLYAVIAYAIQVLEESRTPIDTNLGTIISGAMRL
FFGTLAIPLFFYLPRKTLMYISTGLACLSISSLGILGLLELETNTFTTYF
PVGAISLYMVSFTFGFQSIPFLYLGEYYPPHVRQHLAGLTSTLRFLGFFI
MLKLFPQMMEFFGPNYTFIFLGLVCLFAGIYAKVVLPETKGLTLNQIQDL
FRTKKECSDVETNRL
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mRNA from alignment at LSalAtl2s1314:155107..157706+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001825-697672 ID=EMLSAT00000001825-697672|Name=EMLSAT00000001825|organism=Lepeophtheirus salmonis|type=mRNA|length=2600bp|location=Sequence derived from alignment at LSalAtl2s1314:155107..157706+ (Lepeophtheirus salmonis)
AAAATTATAGATATTATTTCTCTTCCAACATTTTACAGAGAGTGTCGGAT
TGTGGATTGACTACTGTAAGTATAGGTTAACCGATTGCTATGAAAAAGTG
GAGAAACCATAGAGATAAAAAACATGGAGTGATGATGTGAAGATGAAGTT
GATACCATAAAAAAAGAGTATCGTTGACCAAAATATTCAAATTTTAGTTC
TTATATATGCATATATATATAGAAAAAAGAGGTTTTTTTAAAAATATTTG
TATATTTAAAACTGTATATTTCGTTTGATTCTAATTTTTTAATGGAAATC
TTCAGTTTTTATAAAAGTATAGGATGATTCCGTATTCATGATTACATTTA
ATTGATGTATAAATAACACTATTATCTATTGTTTTGGTCATTTAACTTTT
GGATTTAAAAAAAATTCCTTACTTTTGCTTGGGGTAACTAGTCTATGTAG
TTTATCTCTACGGGCACTTCCAAGGTTGAGTAGATTCCTTGTCTTATTAG
TTATTAGGAGTACATATCTATAAAATTTGTCTATTTTTTTTTTGTCAAAG
CCGATCAATATCCGAGCAACGTTGGGTACTCCAGCTTGTATTAAATAAAG
CTACTAGGTGTATGATAACAACTAATTTTAATTATATTTAACTAAAAAAG
TATGGAGTCTATTTTGATTTGTGAAATTTTATAATTAGTTTTGTATACAA
ATTCAATTGTTTTCGATATATATTATTTTGGGGTTTTTAAATGCATTCTA
AATGCACCCTCGAAAGCTGACGAAAAAATTCATTTTTTACAACTACATTA
TGCATGTATCTATTTGTTTAAATTCTAGTTATTTTAGACGGGAAGCAGCG
CTGATTCATTTAAACAAAAAAAAATTCTACGTGTTGACAAAAAGCAACTG
GAAAACGGGAAAAAAAAAAAATACTGAAAGGAAGAAGAGAATAATATCGA
GTTTGCCTTCCAGTTCAAGAATTTCCTTAGTGCTCTAAGCTTCTCTCTCT
CGGCTTTCTCTTAAAAGAAAGAGTGAATACTTATTTAAGACTTACTCCTT
ACTTTGTAGGAGATGAGTATCCCCGAGGTAAACAGACTGGTTCATCCAAG
CAATGCTTATTATTAAATTTATAAATATTTTCTTTAGTTTTTAGGTGGAT
TTACGATTAATCTTGCATTTATTACTAATGGATTTGCCTTGGCCTATCCC
ACAATTGCATTGAGTCAACTCACCAATAATGGTACTGAATCATGCTCATT
TGTTATGAGCAAGGAAGAGGGATCCTGGTTCGGTATGAGTTTAGAGATTG
ATGTTTTCAAAAAAAAAATCCTTTATCCTCTTTTTTTTAGCTGGACTTTT
GGGCATCGGAGGTATTTGTGGGAGTGTGTTCTTCGGAACTTTGATTGGCC
AAAGAATTGGTAATCGAAAGACTCTCCTCTTGGCAGCTATTTTAGACATT
ATTGGATGGCTTCTTATTGCATTTGCTGTGAATTCTCCAATGATGATGGG
AGGACGATTTTTAAATGGTGTTTTTGTTGGCACAATAGGCCCTAGTGGAT
ACACCTTCCTATCAGAAATAATGCATCGTAAACATCGAGCTTCTTGTTCA
CAAGCAACTTCTGTTGCAATTAGTGCTGGGATGCTAGTCACTTATGGACT
AGGGTCTGTGATTTCATGGAACCTCCTTGCGATTGGATGTGGTATTTCTT
CAGTTCTGTTCTTTATCATGTTACTTACAATGCCAGACTCTCCATATTGG
AATGCCTCTATCGGAAAAATTGAGGAAGCCAAGAAATCTTTAAGTCATTT
CAGGTCAAAGAAGGACGATGTGGAAGAAGAGTTCAAAGAAATCATGGAAG
GAATACAAAAATCCATCAAAAAAGAAAAGATTTCATTCTTCGAGGCCATG
AAGTTACTCTTCACGGATGAGACATGCTACAAACCTTTCATAATATTAAG
CGTTTTGTTCTTAATTCAAACCCTTTCTGGGTTGTATGCAGTTATTGCTT
ATGCTATTCAAGTATTGGAAGAGTCCAGGACTCCTATTGATACAAATTTG
GGCACAATTATCTCCGGAGCAATGCGACTTTTTTTTGGAACTCTTGCAAT
TCCCCTCTTCTTTTATCTACCTCGTAAAACACTAATGTACATTTCCACTG
GCCTTGCTTGTCTCTCTATTTCCTCTCTGGGCATTTTGGGTCTCCTAGAA
TTGGAAACAAATACATTTACCACATATTTCCCCGTTGGTGCAATTTCTTT
ATATATGGTGTCATTTACATTTGGATTCCAGAGCATTCCTTTCCTCTATC
TTGGAGAGTATTATCCACCTCATGTGAGACAGCACTTGGCAGGCTTAACC
TCCACCTTAAGATTCTTAGGGTTTTTTATCATGCTCAAATTATTTCCTCA
AATGATGGAGTTCTTTGGACCAAATTATACATTTATATTCCTAGGACTTG
TATGTCTCTTTGCTGGAATTTACGCCAAAGTAGTTCTCCCTGAGACAAAG
GGGCTTACTCTGAATCAAATTCAAGACCTATTCCGAACCAAAAAGGAATG
TTCTGATGTAGAAACCAACAGATTATAAGAGGTTCTTCCATTTATATGTG
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