EMLSAT00000001949, EMLSAT00000001949-697796 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001949
Unique NameEMLSAT00000001949-697796
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s13459supercontigLSalAtl2s13459:2..1009 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001949 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001949EMLSAG00000001949-684715Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000008610EMLSAE00000008610-717538Lepeophtheirus salmonisexon
EMLSAE00000008611EMLSAE00000008611-717539Lepeophtheirus salmonisexon
EMLSAE00000008612EMLSAE00000008612-717540Lepeophtheirus salmonisexon
EMLSAE00000008613EMLSAE00000008613-717541Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto767777auto767777Lepeophtheirus salmonispolypeptide
EMLSAP00000001949EMLSAP00000001949Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001949

>EMLSAP00000001949 ID=EMLSAP00000001949|Name=EMLSAP00000001949|organism=Lepeophtheirus salmonis|type=polypeptide|length=264bp
MVMRKPIYVVSALYMSTIITVILVLTTRLGFPYSASPTNLAPQRSLIMHT
AREFYSKDGSLIKEDSAFFLSNLDRNSPNLLIKHVPPFHDLKQVSEKDCD
QYIFCGLPMYYPASSMLKIHHYLKAPRPRIYQDTSLKLIHSEEHKPQVLK
LLFRVEGPDHMGIFISPAVGVKLTSWSFVEGKILNGPSWIDNRPTHYVFY
SHGISPTPWEFWLEFKVPKSYSPDRDLVDISVTGHIIHGIHMQSPDLQEL
LQYFLVGSYPLGWT
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mRNA from alignment at LSalAtl2s13459:2..1009-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001949-697796 ID=EMLSAT00000001949-697796|Name=EMLSAT00000001949|organism=Lepeophtheirus salmonis|type=mRNA|length=1008bp|location=Sequence derived from alignment at LSalAtl2s13459:2..1009- (Lepeophtheirus salmonis)
AAATTTTTAGTTACATTTGCCCTCTGGTCATGGTAATGAGGAAGCCGATC
TACGTTGTTTCTGCATTGTACATGTCTACTATCATTACAGTTATCCTTGT
TCTTACTACTAGACTCGGATTTCCTTACTCTGCCTCACCCACGAATCTCG
CTCCTCAGCGATCATTAATTATGCATACTGCTAGAGAATTTTATTCTAAG
GTAATGAATTTGAATCATCTTTCGAAAACATACTAATTATTTATCATAAA
CCTTTCTTAGGATGGTTCATTAATCAAAGAAGACTCAGCATTTTTTCTCT
CGAATCTGGATAGAAATTCTCCGAATCTCTTAATTAAACATGTTCCACCA
TTTCATGATCTCAAACAAGTTAGCGAGAAGGACTGCGATCAATATATATT
TTGTGGTCTTCCTATGTATTATCCTGCCTCCAGTATGCTCAAAATTCATC
ATTATTTAAAGGCACCCCGGCCTCGTATTTATCAGGATACCTCATTAAAG
CTAATCCATTCTGAAGAGCATAAACCACAAGTATTGAAATTATTATTCAG
AGTTGAAGGTACAGGATTTTATTAGTAATCAAACTTATACAAGCTTAAAA
TATGTTGTTTGTTACAGGACCTGATCATATGGGGATTTTTATATCACCCG
CTGTTGGAGTTAAATTAACAAGTTGGAGTTTTGTTGAGGGTAAAATTCTC
AATGGCCCTTCATGGATCGATAACCGCCCAACACACTATGTATTCTACTC
TCACGGAATATCCCCTACTCCATGGGAATTTTGGCTAGAGTTTAAGGTAA
GGATTTATTTAAATATTGTTCTCAAATTACATGATATTTACATTATTATT
TTTTTTCGTACCAGGTTCCAAAAAGTTATTCACCGGATCGTGATTTAGTG
GATATTTCTGTCACAGGACATATAATTCATGGAATTCACATGCAGTCTCC
TGATTTACAGGAATTGTTACAGTATTTCCTAGTTGGTTCCTATCCCCTTG
GATGGACT
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