EMLSAT00000001951, EMLSAT00000001951-697798 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001951
Unique NameEMLSAT00000001951-697798
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1346supercontigLSalAtl2s1346:13820..14632 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001951 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001951EMLSAG00000001951-684717Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000008626EMLSAE00000008626-717554Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769149auto769149Lepeophtheirus salmonispolypeptide
EMLSAP00000001951EMLSAP00000001951Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001951

>EMLSAP00000001951 ID=EMLSAP00000001951|Name=EMLSAP00000001951|organism=Lepeophtheirus salmonis|type=polypeptide|length=270bp
MLAQKRDITIKYKITVNFIPQPSDSIYFFNRQQQLQQKNEMYKLLLTFAL
MASVHGDHSAPHPSPAPXHPPASYHGPAPAYKPAKYEXPAKPYAFQXGVA
DDYTGSNFSAEENADGKITSGSYKVALPDGRIQTVSYTVDAYNGFVADVQ
YEGTPVYPKYEPKPSAYKPAPYHAPAPAPYHAPAPAYKPAPYHAPAPAYK
PAPAPSYNPAPAPSYKPAPSYKTAPIPAYKPAPPPTYEPTPAPTTYEPXP
SYKSAPEPIPTYTPTPSYES
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mRNA from alignment at LSalAtl2s1346:13820..14632+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001951-697798 ID=EMLSAT00000001951-697798|Name=EMLSAT00000001951|organism=Lepeophtheirus salmonis|type=mRNA|length=813bp|location=Sequence derived from alignment at LSalAtl2s1346:13820..14632+ (Lepeophtheirus salmonis)
ATGCTCGCCCAAAAAAGGGATATAACGATCAAGTATAAAATAACCGTCAA
CTTCATTCCCCAACCATCAGATTCAATTTACTTCTTCAACCGACAACAAC
AACTCCAACAAAAAAACGAAATGTACAAATTACTCCTCACCTTTGCTCTT
ATGGCCTCTGTTCATGGAGATCACTCAGCTCCACATCCATCKCCTGCACC
TTKCCATCCACCTGCATCCTATCATGGTCCAGCRCCAGCCTACAAGCCAG
CCAAATACGAAGAKCCAGCCAAGCCCTATGCCTTTCAATYCGGTGTAGCC
GATGACTACACTGGCTCAAATTTTTCAGCTGAAGAAAATGCCGATGGAAA
GATCACTTCCGGATCTTACAAAGTGGCTCTTCCTGATGGTCGTATTCAAA
CTGTGAGCTATACTGTTGATGCTTACAATGGATTTGTTGCTGATGTTCAA
TACGAAGGAACCCCCGTCTACCCCAAGTACGAACCTAAGCCTTCTGCTTA
CAAACCAGCTCCTTATCACGCTCCTGCTCCAGCTCCTTATCATGCCCCTG
CTCCAGCTTACAAGCCTGCTCCTTACCATGCTCCAGCCCCTGCTTACAAA
CCTGCACCAGCTCCATCTTATAATCCAGCACCAGCTCCTTCTTACAAACC
AGCCCCTTCTTACAAAACCGCACCTATCCCTGCGTACAAGCCAGCTCCTC
CTCCAACTTATGAACCAACCCCTGCTCCTACTACCTATGAACCTKCTCCC
TCTTACAAATCTGCCCCTGAACCAATTCCTACCTACACACCTACTCCTTC
TTATGAGTCCTAA
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