EMLSAT00000001998, EMLSAT00000001998-697845 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001998
Unique NameEMLSAT00000001998-697845
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1358supercontigLSalAtl2s1358:23081..28432 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001998 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001998EMLSAG00000001998-684764Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000008806EMLSAE00000008806-717734Lepeophtheirus salmonisexon
EMLSAE00000008807EMLSAE00000008807-717735Lepeophtheirus salmonisexon
EMLSAE00000008808EMLSAE00000008808-717736Lepeophtheirus salmonisexon
EMLSAE00000008809EMLSAE00000008809-717737Lepeophtheirus salmonisexon
EMLSAE00000008810EMLSAE00000008810-717738Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769634auto769634Lepeophtheirus salmonispolypeptide
EMLSAP00000001998EMLSAP00000001998Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001998

>EMLSAP00000001998 ID=EMLSAP00000001998|Name=EMLSAP00000001998|organism=Lepeophtheirus salmonis|type=polypeptide|length=1259bp
SPEHHVSLKNEKHFETTHCIESINVNKHVKSNTPSENPFNGVDNEMFPMN
LCIEKYNKRGKSINEYVPSLTPLPSPIKYEDQLKGKKEDIFYDTFNTGSD
QLSAELIQKNQNLITNEQLKISSHTFKELQERKIIDSISIHNMKSTKQVP
SNYGQLNSELEESEKLQDNVHQLFSHDSETLNSLKSAEKNVNLSEKVTLC
QSIESHEHIDKESNPFCQNNIFNFSPCKSLSEIGIVSSKMEKQRSCINTC
DDKHDTNNKYVSKAVEPIKTNRSNISEIHFKNNNSGFIQCGVGISKSAMD
KAKNIFQGEDFNELYQKDSNDPNISSVHSFKVPTKPNGQNESHIQLKSSK
NIGFIKCGSKESVGISKSAMDKAKNIFQGEDFNELFQKDSNDPYISSVHS
FKFTPLKCLQSPMEQNESHIQLKTSKNRDDLSKFFNREIDSVDSSKTISV
CQNESFSSEDDTFDQDVFDTQFLEEVEKTENSYFNLKRKSPITFECSSNK
KCNVSILKLTNDKLLSNFQTDLYHLRQKLPSRVCLKKIALKSIPRTPGFL
GQISTSNNHQIRLKEIRDLLLSLSSVDNSKVNDDWIANHYKWIFLYLHSL
SLRTELYDELSPLSILWRLKYRYDREIAGSCRSALKKIYEGDDSPSKPII
LFIAAIHSDTIELSDGWYSIHSVLKPSISKLISMKKIKXXXEIERDSSHG
NCKPLEDEGRTRLNFSINSCRRARWWAKLGFHWGPRLIIKLKSIKEDGGL
VARVKVIIRRRYPLVYMEKKESKITYINERVYNKKMHALKNSKEEIAEKI
YSQVQKELEDKRIVSQKNKAQFRHGLKIINRTSNVEELYNLIETYADPSI
LESLSSSQVDELKEFKNKESETFRNEMRHEVEARLKSYEETSRVEYVPVL
RLKISDQSPNVFGTLSLWKPSHELLSLLHEDRPFFIHCISANKVFFDEVN
LSSLKSTVFREVSEDFKMNDYFGKSRSLASILDIVMDEYDFKSNFNEVDL
VGLVIQVNDPGRSNEKVVNSAYGSIYLSDLMGNFVRIRFFNSLKDLGMET
LIVPAQVIYFRNLSFRTKDLSLKEIPSLFMKEQTEAFSSSNDSIVSSIIT
EFMESATPNFVDDSARLLATLLGTEIKSPCGYNKDKMSIEITPTSNERAQ
IADPHLFSPSSTIEIVSNSPAALQSSRNQSKLLKLKSMNYADASPLLPII
PLPNGGTXKSNSYAKLYKVPKRRRSKLSFEQEISSNKEPRQESQEFEEAA
NLAMDNLEM
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mRNA from alignment at LSalAtl2s1358:23081..28432+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001998-697845 ID=EMLSAT00000001998-697845|Name=EMLSAT00000001998|organism=Lepeophtheirus salmonis|type=mRNA|length=5352bp|location=Sequence derived from alignment at LSalAtl2s1358:23081..28432+ (Lepeophtheirus salmonis)
AGTCCAGAGCATCATGTATCATTAAAAAACGAGAAACACTTCGAGACAAC
GCATTGCATCGAATCAATCAATGTCAATAAACATGTCAAATCCAACACTC
CGTCAGAAAATCCCTTTAATGGAGTGGATAATGAGATGTTTCCGATGAAT
TTATGCATTGAAAAGTACAACAAACGCGGAAAATCCATTAATGAATACGT
ACCATCATTAACTCCTTTGCCTTCTCCAATAAAATATGAAGACCAGCTCA
AGGGTAAAAAGGAAGACATTTTTTATGATACATTTAATACTGGAAGCGAT
CAATTGAGCGCTGAATTAATCCAGAAAAATCAAAATCTAATAACTAATGA
ACAATTAAAAATATCTAGTCATACTTTTAAAGAACTCCAGGAACGGAAAA
TTATAGATTCTATTTCTATTCATAACATGAAATCAACTAAACAAGTGCCA
TCTAATTATGGACAATTAAATAGTGAGCTGGAAGAATCAGAAAAACTTCA
GGACAATGTTCATCAATTATTTTCTCATGATTCTGAGACATTGAACAGTT
TAAAATCAGCAGAAAAAAATGTTAATTTAAGTGAAAAAGTTACGCTCTGT
CAAAGTATTGAATCTCATGAACATATTGATAAAGAAAGTAATCCATTTTG
TCAAAATAACATATTCAACTTTAGCCCATGTAAATCTCTTTCTGAAATTG
GAATTGTTTCTTCAAAAATGGAAAAACAAAGAAGTTGTATAAATACTTGT
GATGATAAACATGATACTAATAATAAGTATGTTTCTAAAGCTGTAGAACC
AATTAAGACCAACAGATCAAATATAAGTGAAATTCACTTTAAAAATAACA
ATAGCGGATTTATTCAATGTGGTGTCGGCATCAGTAAATCTGCAATGGAT
AAAGCCAAAAACATTTTTCAAGGGGAAGATTTCAATGAGCTATATCAAAA
AGATTCKAATGACCCCAATATATCTTCAGTTCACTCCTTTAAAGTGCCTA
CAAAGCCCAATGGACAAAATGAAAGTCATATTCAGTTAAAATCTTCTAAA
AACATTGGMTTTATCAAATGTGGCTCAAAGGAAAGTGTTGGTATCAGCAA
GTCGGCAATGGATAAAGCCAAAAACATTTTTCAAGGGGAAGATTTCAATG
AGCTATTTCAAAAAGATTCGAATGACCCCTATATATCTTCAGTTCACTCC
TTTAAAGTGCCTACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNATCTTCAGTTCACTCCTTTAAAGTGCCTACAAAGCCC
AATGGAACAAAATGAAAGTCATATTCAATTAAAAACTTCTAAAAACAGGG
ATGATTTATCTAAATTTTTCAATCGAGAGATTGATAGTGTTGACTCTTCT
AAAACAATTTCCGTCTGTCAAAATGAATCATTTAGTAGCGAAGATGATAC
TTTTGATCAGGATGTGTTTGATACTCAGTTTTTGGAAGAAGTAGAAAAAA
CTGAAAACTCTTATTTTAATCTTAAGAGGAAGAGTCCTATTACTTTCGAA
TGTTCATCCAATAAAAAGTGCAATGTTTCAATTCTTAAGCTTACCAATGA
TAAATTACTTTCTAATTTTCAAACAGATTTATATCATCTTCGCCAAAAAT
TGCCATCCAGAGTTTGTTTGAAAAAAATAGCGTTAAAATCAATTCCTCGC
ACTCCGGGTTTTTTGGGACAGATTAGTACTTCAAATAGTAATGAAATCAC
GTACGTATATTAAAAATAATAATTTATTTTGTATTTCAGATCACCAAATT
AGATTAAAAGAGATTAGAGATTTATTATTATCGCTCTCTTCTGTTGATAA
CTCAAAAGTAAATGACGATTGGATCGCGAATCACTATAAATGGATCTTTT
TATATTTACATTCTCTATCATTACGAACTGAATTGTATGACGAACTTAGT
CCTTTGTCTATTCTATGGAGATTAAAATATCGTTATGATCGTGAAATTGC
TGGTAGTTGTCGATCGGCTCTGAAAAAAATATATGAAGGAGATGATTCTC
CTTCGAAGCCCATTATTTTATTTATTGCTGCGATACACTCAGATACTATA
GAGCTCTCGGATGGATGGTACTCAATTCATTCTGTTTTGAAGCCTTCTAT
CTCTAAACTCATTAGTATGAAAAAGATCAAGTNNNNNNCTGAAATTGAAA
GAGATAGTAGTCATGGGAATTGTAAGCCATTGGAGGATGAAGGTAGAACA
AGACTTAATTTTTCTATTAATTCATGTCGACGAGCAAGATGGTGGGCCAA
ACTAGGGTTTCACTGGGGCCCAAGACTTATTATTAAATTAAAATCTATTA
AAGAAGACGGAGGACTTGTTGCAAGAGTCAAAGTAATTATTCGTAGACGA
TATCCTCTTGTTTATATGGAAAAGAAAGAATCGAAAATCACTTATATTAA
TGAAAGAGTATATAACAAGAAAATGCATGCATTAAAAAATTCGAAGGAAG
AAATTGCGGAAAAGATTTATTCGCAAGTTCAAAAAGAGTTGGAAGATAAG
AGAATAGTGTCACGTAAGCAATTTATTCATTAAATTTTTCATATATGTAT
TGATAATTATGTTATTATAATTATTATCATTTTTTTCAGAAAAGAACAAA
GCTCAATTTCGACATGGATTAAAAATAATAAATCGTACGTCTAATGTTGA
AGAATTGTATAATTTAATTGAGACCTATGCAGACCCGTCTATATTGGAAT
CCCTCTCTTCAAGTCAAGTTGATGGTAATCATTTAGGATTAATAATTTTA
AATATCACTCAGTCCGTTCTTTTATAATTGACGTATATATATTGTCTTTT
TACTTGATTAGAACTTAAAGAATTCAAGAATAAGGAATCTGAAACTTTTC
GCAATGAAATGCGACACGAAGTAGAAGCTCGACTTAAGTCATATGAAGAA
ACATCAAGAGTTGAGTACGTTCCAGTTCTTAGATTGAAAATATCAGATCA
AAGCCCGAATGTGTTTGGAACCCTGTCTTTGTGGAAGCCCTCACATGAGT
TACTTTCACTCTTACATGAAGATCGACCTTTTTTTATTCACTGTATTAGT
GCCAACAAAGTTTTTTTTGATGAAGTAAATCTTTCCTCATTAAAGTCGAC
GGTTTTTAGAGAAGTTTCTGAAGACTTTAAAATGAATGATTACTTTGGAA
AAAGTCGATCATTGGCATCGATACTTGATATTGTGATGGACGAATACGAT
TTTAAAAGTAATTTTAACGAAGTAGATTTGGTAGGCCTTGTTATTCAAGT
CAACGATCCTGGAAGGTCAAATGAAAAAGTTGTTAATAGTGCATATGGAA
GTATATACCTTTCAGATCTTATGGGTAATTTTGTAAGAATAAGATTTTTT
AATTCTTTGAAGGACTTGGGTATGGAGACTTTAATTGTTCCAGCTCAAGT
AATATATTTTCGTAATCTGAGTTTCAGAACTAAAGACTTATCTCTCAAAG
AAATTCCTTCTTTATTTATGAAGGAACAAACTGAAGCATTTAGCTCTTCA
AATGATTCTATCGTTTCTTCTATAATTACTGAGTTTATGGAGAGTGCAAC
TCCAAACTTTGTGGATGACTCTGCCCGCCTTTTAGCTACACTTTTAGGTA
CCGAAATAAAGTCTCCTTGTGGTTATAATAAAGATAAAATGTCAATCGAG
ATAACTCCAACTTCGAATGAAAGAGCTCAAATTGCGGATCCTCATCTTTT
CTCACCTTCTTCTACGATTGAAATTGTTTCCAATTCTCCAGCGGCACTAC
AATCTTCTAGAAATCAATCGAAATTACTTAAGTTGAAGAGTATGAATTAT
GCGGATGCATCTCCGCTCCTACCTATAATACCTCTTCCAAATGGAGGAAC
AAMCAAGTCTAATTCTTATGCAAAGTTATACAAGGTGCCCAAGAGACGAC
GTTCCAAGCTTTCGTTTGAGCAAGAAATAAGTAGTAATAAAGAGCCCAGA
CAGGAAAGTCAAGAATTTGAGGAGGCAGCTAATTTAGCTATGGACAATTT
AGAAATGTAAAGGAATTAATCATAGGATATATCAATTTCATTACGTTGTT
TTTATTTCGAAACATGAGAATATACAATAATAATAATAATAATAATAATG
TTGTCAAAAAAATTTGACATTGAAATTTAATAGTACTTATAAAGATGTAC
ATACATATATATTACTTAATACAGATACGCAGGGGATTGGGACTTGGGAT
TGAACGGTGGGATAGGAATCGAATTAAAAGAGTAAAACAAAAATATATGT
AGGACAAGAAATGAGTGAATTATTATTTTCATATAAAATAATATTGTTTT
CAACATTAATTCTTTATTTCGTTTTATGTAAAAAGAAAAATGAACGAATT
AATTTATCAATCATATCTATATATGAAAGGAAATGATAATATGTATTACT
ATGATCATTATATAGAAAAATGAACAAAGTCTGTTCAGAATAAATAACAA
CTAGCTCCTCACTTATATTCAATAGAATATGTGTTGATATGAGTATATAA
TATTTTTTGAGATGATGAGATAGCTCCATGATTTCGGAGATTCAACCAAA
TA
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