EMLSAT00000002095, EMLSAT00000002095-697942 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000002095
Unique NameEMLSAT00000002095-697942
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments
Table of all RNA interference experiments conducted using this feature, grouped by Phenotype CV: host related phenotype, modulation of immune response
Gallery Image Title Gene or target symbol Sex/Stage Phenotype Datesort descending
EMLSAT00000002095_copepodites Astacin both
  1. Copepodid
  2. Copepodid
-Missing-
host related phenotype, modulation of immune response
15.08.2017 - 10:05
21.08.2017 - 10:09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s13933supercontigLSalAtl2s13933:1..965 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000002095 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000002095EMLSAG00000002095-684861Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000009279EMLSAE00000009279-718207Lepeophtheirus salmonisexon
EMLSAE00000009280EMLSAE00000009280-718208Lepeophtheirus salmonisexon
EMLSAE00000009281EMLSAE00000009281-718209Lepeophtheirus salmonisexon
EMLSAE00000009282EMLSAE00000009282-718210Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto767721auto767721Lepeophtheirus salmonispolypeptide
polypeptide-auto767723auto767723Lepeophtheirus salmonispolypeptide
EMLSAP00000002095EMLSAP00000002095Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000002095

>EMLSAP00000002095 ID=EMLSAP00000002095|Name=EMLSAP00000002095|organism=Lepeophtheirus salmonis|type=polypeptide|length=265bp
LLLTFQNVYSSVKHAECRIVYDKFHRQEIASRNLIAGENWPNNEVPYVIS
SEYSSSDVDVIKSAMKEIESKTCVKWVPRSGQKSYVTINPREEGCFAVLG
YNRNRGVHNLNLQRTNGGRTCMIMGIAAHEMLHILGFAHEQTRPDRDQFV
HIYWSRIQRDSISNYFRAIDINARERPPVCDPRSTQTSFDNCYSGFKTRT
FGLRYDYGSIMHYGLNYFTSTGQDTMGILKPVPVGAVIGNRKGMTKLDAL
KVQARYDCNEGPEAK
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mRNA from alignment at LSalAtl2s13933:1..965+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000002095-697942 ID=EMLSAT00000002095-697942|Name=EMLSAT00000002095|organism=Lepeophtheirus salmonis|type=mRNA|length=965bp|location=Sequence derived from alignment at LSalAtl2s13933:1..965+ (Lepeophtheirus salmonis)
CTACTCCTGACTTTCCAGAATGTCTATTCAAGCGGTAAGTAAATGAAATA AGGATAAATTCATTCTACTACAACCTATTCATATTCAGTCAAGCATGCTG AATGTCGCATCGTTTACGATAAATTCCATAGACAGGAAATTGCTTCAAGG AATTTGATAGCAGGGGAAAATTGGCCCAACAATGAAGTTCCTTACGTAAT CAGTTCCGAGTACAGCAGTTCTGATGTGGATGTGATTAAATCTGCCATGA AAGAAATCGAGAGTAAAACTTGTGTGAAATGGGTTCCACGCTCGGGACAA AAGAGTTATGTCACTATCAACCCCAGAGAAGAAGGATGCTTTGCAGTCTT GGGCTACAACCGTAATCGTGGAGTGCATAATTTGAATTTACAAAGGACTA ACGGAGGTAGAACATGCATGGTGAGTTAGCTTTTTATGAGAAAGGCAGTT TTCTTGATTTACATACTAATCCTTCTGCTCAGATCATGGGTATTGCTGCC CACGAAATGCTCCATATTTTAGGATTTGCTCACGAACAAACAAGACCCGA TCGAGATCAATTTGTTCACATTTATTGGTCAAGAATTCAACGGGATTCTA TATCTAATTATTTTAGAGCCATTGATATTAATGCAAGGGAACGACCTCCA GTATGTGATCCTAGGTCGACACAAACTTCATTTGATAATTGCTACTCGGG TTTCAAAACACGTACATTTGGATTGAGATATGACTATGGATCTATCATGC ACTATGGATTAAACTAGTAATTATATCCAGAATTTTTTTGAATATGAAAG TATAATTGTGTCATTTTTAGTTTTACATCCACCGGCCAAGATACAATGGG AATTCTTAAACCTGTACCCGTTGGTGCTGTTATTGGTAATAGAAAGGGTA TGACAAAGTTAGATGCACTTAAAGTACAAGCTCGTTATGACTGTAACGAG GGACCAGAAGCTAAA
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