EMLSAT00000002323, EMLSAT00000002323-698170 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000002323
Unique Name	EMLSAT00000002323-698170
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s143	supercontig	LSalAtl2s143:491406..497535 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000002323 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000002323	EMLSAG00000002323-685089	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000010277	EMLSAE00000010277-719205	Lepeophtheirus salmonis	exon
EMLSAE00000010278	EMLSAE00000010278-719206	Lepeophtheirus salmonis	exon
EMLSAE00000010279	EMLSAE00000010279-719207	Lepeophtheirus salmonis	exon
EMLSAE00000010280	EMLSAE00000010280-719208	Lepeophtheirus salmonis	exon
EMLSAE00000010281	EMLSAE00000010281-719209	Lepeophtheirus salmonis	exon
EMLSAE00000010282	EMLSAE00000010282-719210	Lepeophtheirus salmonis	exon
EMLSAE00000010283	EMLSAE00000010283-719211	Lepeophtheirus salmonis	exon
EMLSAE00000010284	EMLSAE00000010284-719212	Lepeophtheirus salmonis	exon
EMLSAE00000010285	EMLSAE00000010285-719213	Lepeophtheirus salmonis	exon
EMLSAE00000010286	EMLSAE00000010286-719214	Lepeophtheirus salmonis	exon
EMLSAE00000010287	EMLSAE00000010287-719215	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto778123	auto778123	Lepeophtheirus salmonis	polypeptide
EMLSAP00000002323	EMLSAP00000002323	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s143:491406..497535+

protein sequence of EMLSAP00000002323

>EMLSAP00000002323 ID=EMLSAP00000002323|Name=EMLSAP00000002323|organism=Lepeophtheirus salmonis|type=polypeptide|length=647bp
MSCGCSTQQYSWMLFRMRRTKAILGSLVLACFLIFFYTLSQNTNEETQGD
TPKINLENLEVKLKGLEHAIEGNERMLSSIKESINNXEKHXASLDKESNV
IRSKGHSSVRKTFATIHKADXLFAQRSSTXTNISTLAIYEEIPFDNQDGG
PWKQGWPITYSQSAFSQSDKLRVFVVPHSHNDPGWIKTFDTYFKENTIYI
LNNIVPKLTADPRRKFIWAEISFFSMWWNLQSEDVRSNIIKLLENGQFZI
VTGGWVMNDEANTYYGAMIEQQISGHEWCKNNLKGYQPTFGWAIDPFGMT
PTMAYLLKRMGFEGMLIQRTHYEVKKYLARNQNLEFKWRQHWDHESSTDM
LTHMMPFYSYDIPHTCGPNPKICCQFDFDRLPGMRTGCPWKIPPKPITDS
NVEERALLLLDQYKKKAQLYKTNVVLVPLGDDFRYDKSVEWNKQFDNYQK
IFDYVNNNPELNAELKFGTLGDYFRTLKNESKRKTGLQDGLFPSLSGDFF
TYADVNDNYWSGYYTSRPFFKNFDRVLGGYLRAAEIMFSMAWAEMMSYSN
SDTKKISNPLMKYIVEARRSYSLFQHHDGVTGTAKKHVMQDYGRRYVFCF
NSVFIFGSNRHYSELLGVDKLKKKKNKFSFNNIHMYNGTRFTFNRTH

mRNA from alignment at LSalAtl2s143:491406..497535+

Legend: polypeptideexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000002323-698170 ID=EMLSAT00000002323-698170|Name=EMLSAT00000002323|organism=Lepeophtheirus salmonis|type=mRNA|length=6130bp|location=Sequence derived from alignment at LSalAtl2s143:491406..497535+ (Lepeophtheirus salmonis)
ATGAGTTGTTACTTTTGAACATTAATTTATGACATTAAATTAAAAACATC
TATTTCCCTGTCTAAAGTGAGTTTATTAAAAACACAACAACCGGAGAATG
ACATTTCTTGATGACGTCACATCTCAACTGACAACAACATAATAAAACAC
AGTATTGAAATTGTAAAGACCGACTTCCTTCTCGTTAATAGGTGGTTGTA
GTACTCAGCAGTATTCCTGGATGTTGTTCAGAATGAGGAGGACAAAAGCA
ATTCTTGGAAGCTTGGTCTTGGCTTGTTTCCTCATCTTTTTCTACACACT
ATCCCAGAATACCAATGAAGAGACTCAAGGAGATACACCAAAGGTACATA
TTCTTCATAATTTTAGAGAATTTCATTTTCTGTATGGTTTATTTCCCCTT
AGATTAATTTGGAAAATTTGGAAGTGAAGCTCAAGGGCCTGGAACATGCC
ATTGAAGGAAATGAACGCATGCTTTCCTCTATCAAAGAATCCATTAACAA
CTKGGAGAAGCATMAAGCCTCTCTGGATAAAGAGTCGAATGTAATTCGAT
CTAAAGGTCACAGCTCTGTCCGGAAAACCTTTGCAACTATTCACAAAGCA
GATTTMCTCTTTGCTCAACGCTCATCCACCMCCACCAATATAAGTACCTT
AGCCATCTATGAAGAAATACCCTTTGACAATCAGGATGGGGGACCTTGGA
AGCAAGGTTGGCCCATTACCTATAGTCAGTCCGCATTTTCTCAATCGGAT
AAGCTTCGTGTTTTTGTTGTACCACATTCACATAATGATCCAGGATGGAT
TAAAACATTCGATACATACTTCAAAGAAAACACCATATATATTTTGAATA
ACATTGTGCCTAAACTTACCGCAGATCCAAGGCGGAAATTTATATGGGCA
GAAATTTCTTTTTTTTCAATGTGGTGGAACTTGCAAAGTGAGGACGTTAG
GTCTAATATTATCAAGCTTTTGGAAAATGGACAATTTSAAATTGTCACTG
GTGGGTGGGTTATGAATGATGAAGCAAATACTTACTATGGTGCAATGATC
GAACAACAAATATCTGGTCACGAATGGTGTAAAAATAATTTAAAAGGATA
TCAGCCAACGTGAGTTTGCAGACGATTATATAATAATACGAATAGTAATC
ATCATCATTGTATTTGTAATATTTTGCTAAAGATTCGGCTGGGCCATTGA
TCCCTTTGGAATGACCCCCACTATGGCTTACTTATTAAAAAGAATGGGGT
TTGAAGGTATGCTCATTCAGAGAACTCACTATGAAGTCAAAAAGTATTTA
GCCAGAAACCAAAACCTTGAATTTAAATGGCGTCAACATTGGGGTAAAAT
ATTTGTAATTTTTTGTACTTCTTTAAATAATTATACATATGATTAATATA
GATCATGAGTCTTCAACGGATATGTTGACTCATATGATGCCTTTTTACTC
CTACGATATTCCCCATACGTGTGGACCCAATCCAAAAATTTGTTGTCAGT
TTGATTTTGATAGATTACCAGGCATGAGAACTGGATGTCCATGGAAAATT
CCTCCTAAGCCCATCACTGATTCCAATGTTGAGGAAAGGGCTTTACTACT
TCTAGATCAATACAAGAAAAAAGCTCAATTATATAAGTAATGCACATAAT
TAATCATTTAATTTATATGTTTAATTTTTCTCCAGGACAAATGTTGTGCT
TGTACCTCTTGGTGATGATTTCCGTTATGACAAGTCCGTGGAGTGGAACA
AGCAATTTGATAACTATCAAAAGATATTTGACTATGTTAATAACAACCCA
GAACTCAATGCGGAATTGAAATTTGGAACACTTGGGGATTATTTCAGAAC
TTTGAAAAATGAGTCTAAAAGAAAAACAGGTCTCCAAGATGGTTTATTTC
CCTCACTTTCAGGTGATTTTTTTACATATGCTGATGTAAATGATAATTAC
TGGTCTGGATATTACACATCGCGGCCATTTTTTAAAAATTTTGACCGTGT
TTTGGGAGGATATCTTCGGTAAGGTTTCTTTATATTTATGATATGTATAT
GTTCCGAATCTTTCTTTAAATTGTAGAGCCGCTGAAATTATGTTTTCAAT
GGCCTGGGCTGAAATGATGAGCTACTCAAATTCGGATACAAAAAAAATAT
CTAATCCCCTAATGAAATATATTGTCGAAGCAAGACGAAGTTACAGTTTG
TTTCAGCATCATGATGGTGTTACCGGAACTGCAAAAAAACATGTCATGCA
AGATTACGGAAGGCGGTATGTGTTTTGTTTTAATTCGGTTTTTATATTCG
GGAGTAACCGACATTACTCGGAGTTATTAGGCGTGGACAAATTGAAAAAA
AAAAAGAACAAATTTTCATTTAATAATATACATATGTACAATGGAACAAG
GTTTACATTTAATAGGACGCACTAAACTTTTATCTAGTCACGTTTGTTGC
TATATTGACATTGCTTAGTTCAGCTAGTCCCTCAGTTCTAAAATATTAAC
CGTTTTCTCAAAATTGAGGGATCGACAGACATACTGACGCACTTTGCTTT
ATTAATATAGATGTAGTTTTATGTCTCAAATTATGTTTTTGCAGGATGTC
TAAAAAGTATAAAAGAGCTTCAAATCGTCATGTCTCAAGTCACTCACTAT
CTTTTAACATCATCCAAGACATTGTATAAAGTTGAAAATGAGAACAAAAT
ATGGTTTGAGTTCAGTGAGAAAGCTGATGATTTTGCATCATTGTTTTCGG
AGCGAGTGCTTGAGACGAATGGCTATGACAAAAATATGGTAACCATTTTC
AACTCCCATGGAAGAACACGGTCAGAAATGATTACAATCAAAGTATCTAA
TCCTAACATTCGACTATACACAATAAACTTGGTTGATGGTGATGAGGAAG
AAGAAGATATTAATTTTCAAATTAGTCCAGTCTTCGATAGTCAACATGAG
ATACTTAATACCCAGTTTTATTTAAGTTTTGTCGTTGAAGTTGCGGCACT
TTCATTAAAAAGTTACTATATGGTTGAATTAAAACCTGAAGAGGGTTCAA
ATCCGTAAGTTCATTTAATGATTTTAACTCGCTTTGTTAAAATAAATTGT
TTACCATTGTTTAGGAGTATGGAAATAGCGAATATTCGGCTTTATAACAC
AGTCAAGCAGCCTTTTCAAGTTAAACCCTTTTCTGATGTGGGGGTTTTCC
ATCAAGGTGCTAAATTTATGCTCGAAAACGGTTATGTACGTACTCATTTT
GATGAGAATGGAATTCTTGAGGCCATTACAACTCTTGACGATAAAGTCAA
AACGGATGTGCGATTGTCTTTTGTGCAATACTCGACGAGGAATGTTGGTG
AAAAGTCGGGTGCCTATCTCTTTTTACCAGATGGGCCAGCTAAGACAATG
AGAGTTGAAAGCCCTATTGTGGAAATTATTGAAGGAAAACTATTTTCATC
TGTTAAAGTCTTTTTGCCTCAAATCGTACATTATGTCAGAGTAATGTCAT
CACCTGGCGTAGACGGAACTGGTCTACAAATAGAAAATATCGTTGATATG
AGAAGATATAATAATTTGGAGATTGCTATGAGATTTGATGCCGCCATTGA
TTCAAAAACTATTTTTTATACTGATTTGAATGGCTTTTCCATGATGGAGC
GTAGAAGATTAAGTAAAATACCGCTTCAAGCCAATTTCTATCCAATAGCA
TCTATGGCTTATATTCAAGATACATCCAGGTAAGATTCAAGATTTTGATT
CATCCTACATGTCTATGTAATTATAATTTATCTTTATTAGTCGCCTTACC
TTGATTTCTCGTCAACCCCTTGGTGGTTCTTCACTCCAATCTGGACAATT
GGAAATTATGCTTGACCGTCGGCTGATGCAAGATGATAATCGAGGTCTTG
GAGAGCCCGTTACTGATAATTTAATCACGAAAAGTAGTTTTACTTTAATT
CTTGAGAGAAGCATTCCCTCATGTAGAGGCGAAAATTCTAAAAATGGTGC
ATCCTATCCATCTCTTCTTGCCGTGGGAGCGCGTCATGCACTCCTTAATC
CCTTATACTCAATGTTTTATTTGGGTGAAAAATCAAAATTGTCCTCTTTA
TCTAACTCATATGCAAATGTTGAACGAGATTTAGCTTGCGACATTGATAT
TTTAAACTTGCGAACCTCTATTACAAGTTCAGAAACTCCTACTGATTCTT
CAGCTTTCATAGTTCATCGTCAGGGTTTTAATGGTTGTTACAAGCCCATT
GGAATGAATTGTGTTACAAACGAAGGAAGGGTAAGATCTACTTAGACTTT
CATTATAGGATTATAATGTAACTGTTGTTTAGTTTTTGCGAATTTGTATA
TGTTGGTTGTGATAGAATATTTTTTCTTACATAGTATATCTGATTTATAA
GTTTTGTTTTATACAAACTTTTAATATGCTTAGACAATTAAGTTATTAAT
TATTACGAAAGGTTCAACTAGAATCTAATGGTAGAGTAAAGTGCAATATT
TATTTTTAAAGATGTTGTATTTTGAATCATATGTGCACTCTTGGGTATTT
ATAATAATATCAACTTTTGCTTCCTTCAATCTAAAAGGATGTTCCATTAA
GGAAATTAGGGCAATTCATTATGTCACAATGAGATAAAATCTGAGTATTT
TGAGTGAAATATCTGTTCTTCTGCAAAAAATATTACTATTTGTCGTGTAA
AAGTCTTTAAAAAGTAACATTTATTCAACTTAAGAGCCATCTAGCGATTC
AGAATAAGATGTATGTAAGTAATCTGTACAGTCCTTTTTATGAACAATGA
TTAATAGAAATACAGGGTTATACTATTACGCGTATACGACTGATGTTTGA
ATTCCACCACATTTTTTAATATTGACGTCATAGTGTATGAGTGGTTGTGT
GTTTTGTCAAAATCTGTCTGTCTAGCCCAGCAGTCGTTATGATACATTAA
AAATTATAGCATGCCCGATTACGTTGTGGTTTATCCTTTTATTTCTATTT
ACCTTGGTACTAATGAAATTTTGTAGGCGTAATGCATGTGGTATCGAGCG
TGCGATTCATATTAAAAAGTAAAATAAAATGAATACATTATATGAAACTA
GAATGGGCACTTAACGTAAAACCTCCACCTAAAATCAAATTGAGCTATGT
ATCTCAATCTATTACAAAGTTATGGGGGAATATGCATTTTTTACGTTTTG
TGTTACCTTGACCTCTCAAAATTTACTGGTCTCTTAATGTGACCATATAT
CCACCGGAGTGTCCCCTCCCTAAACTGGCCCAGCGACTTATCTAATAACA
ATACATGTACTATCCCCCTGTGCTACGCCTATGCCCCGAAATACCTACAT
AATAACAATGTAATTTTCATCGATTAAAATAAAATGATAGAATCAATTAA
TATTTGATAATTAAAATAAACAGACTTCTAAATCAGTAATTAAATCAGAC
GTTATGTGACGTACAAATGACAACTTGTATAATCAACTTGTACTCAACAA
CTCCATTAATTATGTATGTTTCTTTTCAGTTATCCCTGTCTGAGCTCTTT
CCACATATCTACTCCAATAACGTGCAACAAATGACTCTCTCATTGTTATA
TACTGGACAAAAGATTGAAAAGTCATTTATGGTATCCATTAAGCCCATGG
AAATGTATACTTTTATTTTGAAGCATTAAGAACTCAACATTGACGGAGGT
TGCGTTCCACAAAATAATTACAAACAAATTCAACATTATTACTTTTTCTT
AATGATATTAATTTTAACATTGCTATACTCTGTGATATATTATTAATGCA
TTTGTTTTAAAAATGAGAGTTATAATTCTTCTGATTTAAGAAATGAGTTC
CTCCACTGTCATAATTAGGGATGGGAAAAGTGGTTGAAATCCTCGTGAGC
ATGGCTTTAAAACAGTATAAGTTGGTAAACTGCAAGATATTCAATATGTA
TCCTTATTTTGAAAGTACAAACGTATTAGGGAGGAAGGAGCAATATCATT
TTTTTAGTAAATGTTGTTCATCATACTTGCCAACCAATATATACTTTTTT
ATTCATTTACACTCACGAAGATTTAGTCAATTTTCACATCTCTAATCTTA
ATATTATGTTTTCGTTGTCCGTCATTTACC

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