EMLSAT00000002411, EMLSAT00000002411-698258 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000002411
Unique NameEMLSAT00000002411-698258
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s145supercontigLSalAtl2s145:254198..255865 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000002411 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000002411EMLSAG00000002411-685177Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000010645EMLSAE00000010645-719573Lepeophtheirus salmonisexon
EMLSAE00000010646EMLSAE00000010646-719574Lepeophtheirus salmonisexon
EMLSAE00000010647EMLSAE00000010647-719575Lepeophtheirus salmonisexon
EMLSAE00000010648EMLSAE00000010648-719576Lepeophtheirus salmonisexon
EMLSAE00000010649EMLSAE00000010649-719577Lepeophtheirus salmonisexon
EMLSAE00000010650EMLSAE00000010650-719578Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto775361auto775361Lepeophtheirus salmonispolypeptide
EMLSAP00000002411EMLSAP00000002411Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000002411

>EMLSAP00000002411 ID=EMLSAP00000002411|Name=EMLSAP00000002411|organism=Lepeophtheirus salmonis|type=polypeptide|length=448bp
MSVYSGNRSVDPCSEEEQEEEDDXSNHAEXSTSRFLPMYLKKLIFIHYFI
FLFKLGSTLLIQNELENFRQEWKNEVRNKRVDSETVDQVEDNLNSGLVSQ
ATELFQQGVQCENNGDLYDAVKYYKKAFQLVPDIEKKTFDLVSHSKSANV
XPTTKSHQPMDELEKNFSKYINLSSLNIVVNDGKICDKEFDQDTTHLSAL
PQEILIHILKWTVSDELDVHSLERVSSVCKGFYIASRSPVLWKNICVRTW
GLHNVENSTKNWRDYXIRKPRVLPYGCYISKTTYMREGEKGFQDECYRAW
HVVHYFRYIRFFASGVXXXXXXIRCEIFKTLPPPVQGTMYGRFKIMRNKV
VCVLIRKSEHKLNNPRKKQFKRKDSSYVYVAPEQEMHIEFEIKCRKNRRL
EWSRYFIVSKYNNGVEKANEVDITNINHYPPFKFSPVTSYIGSSEAPL
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mRNA from alignment at LSalAtl2s145:254198..255865-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000002411-698258 ID=EMLSAT00000002411-698258|Name=EMLSAT00000002411|organism=Lepeophtheirus salmonis|type=mRNA|length=1668bp|location=Sequence derived from alignment at LSalAtl2s145:254198..255865- (Lepeophtheirus salmonis)
ATGGTAAGTTTGACTGAAGTCTAGAAGTAATTGCTAATTTTGAGCCATTT ATTAACCCAGTTCAATCTTATAGTCAGTTTACTCAGGTAACCGCTCTGTG GATCCATGCTCAGAGGAGGAACAAGAAGAAGAGGACGACGKCTCCAATCA TGCAGAGMTATCCACTTCACGTTTCCTTCCTATGTATTTAAAAAAATTAA TATTTATTCATTACTTTATTTTTCTTTTCAAATTGGGTTCTACATTACTC ATCCAGAATGAATTGGAAAACTTTCGTCAAGAATGGAAAAATGAAGTGAG AAACAAAAGAGTTGACTCAGAAACGGTTGATCAAGTTGAGGATAATCTTA ATTCGGGTCTAGTTTCTCAAGTAAATCACATGCTAACAATTTATAGACCT TTTTTGATTAACGTGGTTATCTATTGTACATATTAGGCGACGGAGCTGTT TCAGCAAGGTGTTCAATGTGAGAACAATGGCGATTTGTATGATGCAGTCA AGTACTATAAGAAAGCTTTTCAATTGGTTCCTGACATAGAGAAAAAGACT TTTGATCTTGTTTCTCATTCCAAATCTGCAAATGTCAKCCCTACCACTAA GTCTCATCAACCCATGGACGAACTGGAAAAGAATTTTTCCAAATATATAA ATTTAAGCTCCCTAAATATCGTTGTGAATGATGGAAAAATTTGTGATAAA GAATTTGATCAAGATGTAAGATACATTCTTTTTCTAAAAAATATCAAACG ATCTGTTTCAATTTTTTTAAATTTTATAGACAACCCATTTAAGTGCCTTG CCACAAGAGATCCTTATACATATTTTAAAATGGACTGTGTCAGATGAATT GGATGTGCATTCTTTGGAAAGAGTTTCATCTGTGTGTAAAGGGTTTTATA TAGCTTCCAGATCACCTGTTCTATGGAAAAACATATGTGTGAGAACATGG GGTCTTCATAATGTGGAAAATTCTACTAAAAATTGGAGGGACTATTTKAT TCGTAAGCCGAGAGTTCTTCCATATGGTTGTTATATTTCTAAAACGACTT ACATGCGTGAGGGGGAAAAAGGATTTCAAGATGAATGCTATAGAGCCTGG CATGTTGTACATTATTTTAGATATATCCGATTCTTCGCTTCTGGAGTTGN NNNNNNNNNNNNNNGAATCCGTTGTGAAATCTTTAAAACACTGTTATTGG TATATAGAATTAGGGTTTTTATAAATCAATGTTATCACAATTGAACTCCA TTCATAGGCCACCACCAGTTCAAGGTACAATGTATGGTCGTTTTAAGATT ATGAGAAATAAAGTGGTGTGTGTTCTTATCCGAAAGTCCGAACATAAATT GAATAATCCAAGGAAAAAACAATTTAAGAGAAAAGATTCATCTTATGTAT ATGTGGCTCCTGAACAAGAAATGCATATCGTAGGTTAACATAAGTTTTTT GTATTTTGTCTCATTTAAAATACATTGTTCTATAGGAGTTCGAAATAAAG TGCCGAAAAAATCGAAGGCTTGAATGGTCCCGATATTTTATCGTCTCAAA ATATAATAATGGTGTCGAAAAAGCGAATGAAGTGGATATAACTAATATCA ATCATTATCCTCCTTTTAAATTTTCTCCAGTTACATCATATATTGGCTCA TCGGAAGCACCTTTGTGA
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