EMLSAT00000002444, EMLSAT00000002444-698291 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000002444
Unique Name	EMLSAT00000002444-698291
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s146	supercontig	LSalAtl2s146:146942..154707 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000002444 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000002444	EMLSAG00000002444-685210	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000010812	EMLSAE00000010812-719740	Lepeophtheirus salmonis	exon
EMLSAE00000010813	EMLSAE00000010813-719741	Lepeophtheirus salmonis	exon
EMLSAE00000010814	EMLSAE00000010814-719742	Lepeophtheirus salmonis	exon
EMLSAE00000010815	EMLSAE00000010815-719743	Lepeophtheirus salmonis	exon
EMLSAE00000010816	EMLSAE00000010816-719744	Lepeophtheirus salmonis	exon
EMLSAE00000010817	EMLSAE00000010817-719745	Lepeophtheirus salmonis	exon
EMLSAE00000010818	EMLSAE00000010818-719746	Lepeophtheirus salmonis	exon
EMLSAE00000010819	EMLSAE00000010819-719747	Lepeophtheirus salmonis	exon
EMLSAE00000010820	EMLSAE00000010820-719748	Lepeophtheirus salmonis	exon
EMLSAE00000010821	EMLSAE00000010821-719749	Lepeophtheirus salmonis	exon
EMLSAE00000010822	EMLSAE00000010822-719750	Lepeophtheirus salmonis	exon
EMLSAE00000010823	EMLSAE00000010823-719751	Lepeophtheirus salmonis	exon
EMLSAE00000010824	EMLSAE00000010824-719752	Lepeophtheirus salmonis	exon
EMLSAE00000010825	EMLSAE00000010825-719753	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto773254	auto773254	Lepeophtheirus salmonis	polypeptide
EMLSAP00000002444	EMLSAP00000002444	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s146:146942..154707-

protein sequence of EMLSAP00000002444

>EMLSAP00000002444 ID=EMLSAP00000002444|Name=EMLSAP00000002444|organism=Lepeophtheirus salmonis|type=polypeptide|length=990bp
MSKQTSGSSGNTSPVKTNHNMAYQHGHSFIKKTFHKPTNCHYCSELLCLW
SLMGQGYICEVCNFIVHEKCLKTVSLPCVSVAATLVKNPVAHVWSERTLI
KRRFCNVCRKKIEDIMGFCCEVCDYYLHETCYEFAVPNCLESATYDPAKS
LQDISRNQHHFQEGNLPPNSKCMKCKRACWSQDFLTGMRCQWCGLTGHSS
CLSSMTPCQSICQFGSLGPIFLPPSAISIPRTQLAQHNAVPIKGKDSSAA
LMQAPIRTSISDDWSSTGFMEAAAELEINAPDKEKFKEKRDKERQKERAK
VEKEKENEDETIKVYDGYNSLRKRLFRTVTVNKNCSKDELLLAAMRAFVV
TQDSRNFYLLDVYANYDGDRDEEIEDPYPVQRLKRKEGKRPAILIGLRDN
ENDSGVIKVWARKLQVSPPSLTIPVSGNITTEQVIKEALCRFRLESEETD
TYQLVKVTVEAGRVTETVLSSDDIPWEVLKRRGHEAVRLMELTRFYLEMR
KDPHGPDVALFVGNLPANLSHKQYETILLEFLDDGNRFTFIGPIYYEYGS
MVITFDSSNTAVYAYQVLRASSYEDKKLLVMMLPSIKPSMMSSSVCPLLV
FVNVKSGGGQGLQLIQSFRKLLNPHQVFDLCNGGPLCGLYVFRKMEKYKI
LVCGGDGTIGWVLQCLDNVGQDSQCSXPPCAIVPLGTGNDLARVLRWGPG
YTGTEDPLTLLRDVIDADEVRLDRWTVVFRPNTEDMTGPDGQSLIVSNAQ
TSEDNAQIFVMNNYFGIGLDADLCLDFHNKREENPEKFNSRFHNKGVYVK
VGLRKMVGRRSCKDLNKEVTMEVDGKLVDLPNLEGIIILNIMSWGSGANA
WGIEVNEKFTKPNHWDGVLEVVGVTGVVHLGQIQSGLRSAIRIVQGSHIK
IKMNSEIPVQVDGEPWIQPSGDIVVLKSALKATMLKKSKHRRFTRRNTEP
SVNNSIAISNTTMNVKEEAPPPPPVNLADICDSPTHATAV

mRNA from alignment at LSalAtl2s146:146942..154707-

Legend: polypeptideexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000002444-698291 ID=EMLSAT00000002444-698291|Name=EMLSAT00000002444|organism=Lepeophtheirus salmonis|type=mRNA|length=7766bp|location=Sequence derived from alignment at LSalAtl2s146:146942..154707- (Lepeophtheirus salmonis)
ATGTCGAAACAAACATCAGGCTCCTCTGGTAACACAAGTCCAGTTAAAAC
AAATCATAATATGGCTTATCAGCATGGACACAGCTTCATTAAAAAAACTT
TCCATAAGCCTACCAACTGTCATTACTGCTCAGAGTTGTTGTGTCTCTGG
AGCCTAATGGGCCAAGGGTATATTTGCGAAGGTGAGGAAGTTTGATCCTT
ATTATAAATTATTTCTTAATTACACCCCCTCCTCTTGATCTGMTTTTAGT
TTGCAATTTCATTGTTCACGAAAAATGCTTGAAAACGGTTTCTTTACCCT
GCGTGAGCGTTGCTGCAACCCTAGTCAAAGTATGTATCACTCTTATGGAT
CCAATAAATATAACCCGTTTTCAAATGTTTTCTTTATTTTAGAACCCAGT
GGCACACGTTTGGTCAGAGAGAACTTTAATTAAACGTCGATTCTGTAATG
TGTGCCGAAAAAAGATAGAAGATATTATGGGATTTTGCTGTGAGGTATGC
GATTACTACCTCCACGAAACATGCTATGAGTTTGCTGTACCAAATTGTTT
AGAAAGCGCAACCTATGATCCAGCAAAATCACTTCAGGATATTTCTAGAA
ATCAGCATCATTTTCAAGAGGGGAATTTACCACCTAACTCAAAATGTATG
AAATGTAAGAGAGCTTGCTGGTCACAGGACTTCCTCACAGGGATGAGATG
CCAATGGTGTGGACTAACGGTAAGAAGCTTTCACATTCCATCTCCTCATA
ATATTATTTGTTAGTTTTATTTCCCATCCTTTTCCAGGGGCATTCGTCGT
GTTTGTCAAGTATGACTCCATGTCAATCCATTTGTCAATTCGGTTCCCTT
GGCCCAATATTTCTACCTCCTTCGGCTATCTCCATACCCCGAACACAATT
GGCTCAACATAACGCAGTTCCCATCAAGGGGAAGGATTCATCAGCTGCAC
TGATGCAGGCCCGTAAGAAAGAGAAATGTCAATGTTATTTTCGTAAAATT
TTCATGTTCATTGCAATTCTGTTTCAGCTATACGCACAAGTATTTCTGAT
GATTGGAGTAGTACTGGTTTCATGGAAGCTGCAGCTGAGCTAGAAATTAA
TGCACCAGATAAGGAGAAGTTCAAAGAAAAAAGGGACAAAGAAAGGCAAA
AGGAAAGAGCAAAAGTTGAAAAAGAAAAGGAAAACGAAGATGGTAAAACC
AGTATAGTACTTGTTTTAAGTATCCTGAATAATTACCACTTTTTTTTCTT
TCAGAAACAATAAAAGTATATGATGGCTACAACTCCCTTAGAAAAAGACT
ATTTCGAACAGTCACTGTCAATAAAAACTGCTCCAAAGATGAGCTTCTCT
TAGCAGCCATGAGAGCATTCGTGGTCACACAGGATTCTCGTAATTTTTAT
CTATTAGATGTCTATGCCAATTATGATGGGGACAGAGACGAGGAAATCGA
GGATCCTTATCCAGTACAGCGCCTCAAACGAAAAGAAGGAAAAAGACCAG
CCATATTAATCGGTCTGAGGTACACATTGATTTTCAAGTTCCATAAAGAA
GGCTCTCTCACAATTAATATAATTCATTCACTTTTACAGAGACAATGAAA
ATGATAGTGGAGTGATTAAAGTATGGGCTAGAAAGCTACAAGTCTCCCCA
CCTTCTCTTACAATACCCGTGTCCGGTAATATCACAACTGAACAAGTTAT
AAAGGAAGCTCTTTGTCGGTTCCGTCTCGAGTCTGAAGAAACAGATACTT
ATCAATTAGTTAAGGTTACTGTTGAAGCAGGGAGAGGTAAGAGGGAGAAA
GGATAGATGTATAATTATAATTACCATTCTATATCATAAACTCAACCTTA
TTTAGTGACTGAAACAGTTTTATCCTCTGATGACATTCCATGGGAGGTCT
TAAAAAGACGTGGACATGAGGCAGTTCGCTTAATGGAGCTCACTCGGTTT
TACCTCGAAATGAGGAAGGATCCGCATGGTCCAGACGTCGCACTCTTTGT
AGGAAATTTACCCGCAAATCTTTCTCATAAGCAGTATGAGACTATACTTT
TAGAATTTCTGGATGATGGTAAGTGACGTGTATAGATATTTATTAACTTA
GTTATCAGACATAATAGTGATATCTCCTCTAAAGGAAATCGTTTCACATT
TATTGGCCCTATTTATTATGAATATGGTTCTATGGTGATAACATTTGATA
GCTCTAACACAGCCGTTTATGCCTATCAAGTCTTAAGAGCTTCATCCTAT
GAGGATAAAAAGCTCTTGGTCATGATGCTACCAAGTATAAAGCCGTCCAT
GATGTCAAGTTCAGTCTGTCCTTTACTCGTATTTGTCAATGTTAAAAGTG
GTGGGGGACAGGGGTTACAATTGATACAAAGCTTCAGAAAATTGCTTAAT
CCTCATCAAGTCTTTGATCTTTGCAATGGGGGACCACTTTGCGGGTAAAA
AGTTGAGTTAGATTTAATGATTATGGTAAAGTAAGTCTTTTCCTCTAGGT
TGTACGTTTTCCGAAAGATGGAGAAATACAAAATCTTGGTATGTGGAGGA
GATGGGACCATCGGTTGGGTGTTGCAGTGTTTAGATAACGTAGGACAAGA
TTCGCAATGTTCTMCTCCGCCATGCGCTATAGTTCCCTTAGGCACTGGAA
ACGACTTAGCACGTGTTCTTCGTTGGGGTCCAGGCTATACTGGAACAGAA
GATCCTTTGACACTACTTCGAGATGTCATTGACGCAGATGAAGTCAGGCT
AGATAGGTAACTTTATCGAGATTTATAATGCCAATGCGAGTGATTTTATT
GCAAGTTCATCCTTTTCTGTTCTTTCCCTCTAATGAAAGGTGGACGGTGG
TTTTTAGACCCAATACGGAAGACATGACTGGTCCCGATGGCCAAAGTCTC
ATTGTATCAAACGCACAAACAAGTGAAGACAACGCACAGATATTTGTAAT
GAACAATTACTTTGGAATAGGTTTAGACGCAGATCTTTGCTTAGACTTTC
ATAACAAAAGGGAAGAGAATCCCGAAAAATTCAACTCCAGATTTCATAAT
AAAGGTGTATATGTCAAAGTGGGCCTCAGAAAAATGGTGGGTCGTAGATC
CTGCAAAGATCTCAACAAAGAAGTTACCATGGAAGTTGATGGTAAACTTG
TGGATCTTCCAAATTTAGAAGGAATTATAATTCTTAATATTATGAGGTGA
GATGGATATAATTAGGTACTTGTGACAATAACGGATTAATTATTTGTATT
AACTTAAATAGCTGGGGCTCTGGGGCAAATGCTTGGGGAATTGAAGTGAA
TGAAAAATTTACAAAGCCCAATCATTGGGACGGCGTTTTAGAAGTCGTAG
GAGTTACAGGAGTTGTTCATTTAGGCCAAATACAATCTGGACTTCGATCT
GCTATACGAATAGTTCAGGTATTTATGTTTTATAACTTTTTCTTCGAACC
AATATAATGAACCACACCATGTACNTATTTTCAATAGGGAAGTCATATCA
AAATAAAAATGAACTCTGAGATTCCTGTTCAAGTTGACGGAGAGCCCTGG
ATACAACCCTCCGGTGACATTGTCGTTCTTAAATCAGCATTGAAAGTAAG
TTTAGGACAACATATTTATACATATATATTTAGTTATAAAGTCATACTAG
TGAGGAGAAGAGGCTCGACAGAGAGKATCAGAGGKCATTATTGTTCCTTC
AGAGTTCTTGTTAAAAGAAATGAAAAAAACCTCAATGTCAAATTTCCTAG
TTTAATTTACATGTACTCAGAGCTTAACGTTATAGAGTTATTCATTATCA
ATCCATTGTATAATATATAATATGATATTCCCCTTGCTTTGGCTTTGATG
CCCTGTTTTACGCGTAAAAGTTGTCTGAGTACAATAATTTAGCCATATGA
TCCTCATTCATTAGTAGTATAATATGTATAAGAGCCGAATTGACTGCATG
TTACATACGCTAGAGTATGTAGTTAACAATGGGGGTTGGCCCAATGAAGA
GATTTTGCTCGGATCTTGTGTTTCATTTTGATTTTTAATTTGTACTTACA
TATTGATATTTTTAAAACATACAATCTGGGCTTTAGTCACAACATTTTCT
TATTTCCATACATCGTTTTACTTTTGATTAGGCCACGATGTTAAAGAAAT
CTAAGATGAAAAGAAGAAACGCCGAGAGTGGATCCGTGAGACAGTCCTCG
TACTCACACGGTGTGTCCGATTCCAAGGAGACTTCATGGACATAGTTTTT
CCTCCTTCTTCTTTTCTTTTTGTTATGTAAAGGGGATTCTTTTTTATTAG
AAAAAGAACTACTACTTTTGAACAACTGCTGTATTGTACATACAATTAAA
TACATTCTCACAAAATGAATAAATGATGATGCAAATTATTTCAATAGAGT
ACATACACACACTCCACTACTACATACAAAAACCCAATTATCAMCCCTAT
AATAAACCMCCTCTGCCAGTGATGAGAAGAATAATCTCTCTCTTCTTTTT
TTTCTTTTTCTTCCTCCTATATCTTCCCTTTCTCTTTTTCTTTCTCTAGC
TCTCATGCTCACTCTCTCCCTTTTTCCCATCATAATATTAATATATAATA
GCTGTATCACTACTTTTCACTTTATCTGACCAAAAATTTATATTTTTATA
ATATTTAATCGTATATTATGCGCTTACATATTATGTCCTATATACATGGA
TGTGTATATAGTACTTAATTACATATTTGTAAAGGAGTAGAATGCATTCA
GAGCACTCTCTATTTATCTATTTTCCGTGGAGGCCAAGTCTTACTAATTA
TTATGAGAGACTTGACTTCCCAATCTTCTGTCCCTTTTCTTTCATTATTT
ATTTTCGTTTTTATTTATCTATGTAAGGGGGGAGGGGACCTCCATTCTAA
AAAAAAAACAACAGCACACACTTTATAAGTAAAGTATTAATCTACCAAAC
TTACTTTGGTTCTCTATTTATAGATTATAATATCGTCACAATACTGTCAA
AATTTTATTTATTTAATTATGTATATTATACCATACATATAATAATAAAA
TAGTCACTTTATGAGGGAAATCCATCTATATTTTTTGCTGTCCAAATCAT
TACAGAGGAAGAATAATTAATTAATTAAATACATACATACACTATTTTGA
ATCCATAATTATAATCATTATTATTCATTAATATATTTATTATTATAATC
ATTATTTTTTAGTCTATTTATATCTATCTATCATTCTCTCAGTTATAAGT
AAGATGTTACATACCTAGTACTACGACCTTGTTGTTTGTGTGGAATTTGA
ATGATTTTATTTTATAATAAAAATACTTTCCGACATACAAAATAATATAT
TATTCATTTTACCATCAATCCTTTGTACAGATTAATAAACACCACAAATA
CAATATATAATGTAAACGATCATTTTATTGACAATTTAATATCTACATGC
ATAGATATGCATGGGCCATCATAGCCCTTAGATATACTCTATATAAAATA
TGCATATTATCAACATATCTATGTTTTATTACAAGATCCCTGCATGCAAA
CAACAACCCTAATTCACCGCCCTCCCCCTCACATTGCACTACCCCAACAT
TTCACCTCTTGAGAATCATCAGTAGAGATGAGGAAATTGTTCAAATCCTC
GTGGGCATACATATATAAAAAATGGTAATTTACAAGAAGTTAGTCTTGGA
TTACTCTAAAAAAAACTAAAAGACTTCCAAGTTTTCAATCGGATCCTAAT
AAAATTTCACAGTCCTAGGATCAGTCTTCTATAGTAACTTCAACAGCTGA
AATGACATAGTTACTAACTATGTCATTTCAGCTGTTCAACATAACTTCTT
TCAAGAGACGAGATACCTGAATAGCTATAAAGATAGTCAGGACAGAAGTA
TCGATTCTTATGACCATTGAATTGTAAAAAAAAATCAGACTCATAAAAAA
GACTGAAAGGGGGGGGGGAATGAACCGMTCCGATACTTTATTTAGTGATG
TTTTTCAGTAGGTATATCGTCTATCAAAGTTGCCGAGTTATAATTTTCTT
TTTGATTTACACTCACGAGGACTTAGACAATTTTCTCATCTTTGATCATT
GGAGTGAAACTTGAGGCTGCATGATTTCAATTTAGAGTACTTACATATTT
TTTATTATAAAAAAAAACTCAAACGCCTTGTTGCAGAGATAATTGTAACC
AGGGCTCAACAGCTAAACTAGCCCGGGGCTAGTAAAAAACATTCGGGTGA
ATGGAGAKTAGTCTATATCTAGCCTGTTTTTCTACGTATAATACCGTACC
TTAACTGATTAGTTCCCATAGGGTGTTTATATATCTCAGTATTCAAACTA
GTTTAAACATTAAATATCTAAATGAATATTTCATACTTTTGGATAATTTT
TTTTGGGTTAACGACGCCCATGATGATCTGGATCAGCAGTTCCGAACCTT
TCTGATGCTGTGGTCCCTTAAATTCATTTCTCAAGTTGCAGTGACACCAA
GTTGGATTGAGTTGATCCTTCATAACTTCATTTTTGGAGCTAACTAGTAT
AAGGCTATAAATAAAATTTGACATCTAAATATCTGAAAACTTATATGCTC
AATGCTTTTTATTTACAAAATTTTATTGCAAATGACAAATTGTGACTTTT
CAATTCCTGCATCAACTATGAAATTAAATCCTTACTTTAAAAATTTCTCT
TGGTATTTTCTTTTTCGAATACTTGTCTCTCGATTCATTACGAGGCATCT
CAAAGTTTTTTACAAAATATCTTTTAATTTAGTTTATTATTATAAATATA
TAATATTGTTATTAACACGAGAATACAACACAAGGGCATTCATCATCATA
CAACTATTTTGAAGGCCTTAGGCGACCCCAGTTGGGGTCACGAGCCACAG
GTTGGAAACCACTTATCTAGCTTATATTGTTTTTTCTTTTATATTCTTCG
TTAGCCTTGAAGTTCTTTTAACTTTGATATTGAGCTTTATTCATAAGATT
TAATTAAGAATATATTACTTTCTTTTTGTACTTTCAAAACTTAGCGTATT
TTGCATCAAAAATAAANCTATATTAGTCCAATACTAGTGTAAAATGATCT
AATATTTGTAGTATTATGGGCTAGTAAATTTTTGACATGGTTAATAAAAA
AATAACAATAATTTATTAGCTAGTGGGTAATTTTAACAATCGTCGAGCCC
TGGTTACTTATAACTAACTTATAATTGATTAATCAAAGTGGTATATATAC
ATGGTGAAGTGCTACGTCTTTAGGGAAATTCCACGAATGCTAGGTTTGTT
TTACTTGGAGGTGAGTCAGCTTCTCCTAGCGTGCTACAGTCTTCCATTGA
TGGGGATTTTAAACCCAACTCGTAATACGATCTTTTTCTTCTTCTTGACG
TCCCTCCACCTTCTCCTGACTGACTAAAATCATATTCATACCCCCCACCC
TCCACACAAATATCTTAATTAATATTAGTTAGAAAAAKAATAAKAATTAA
TTATAATCATATCTTAAATTTAATTAGTTAAAAAGAGCAGCACAGCCCTC
ATATTGTATTCTCATTTCTATCTCATTCTATCTCAGGCAACCATGCTCAA
AAAAAGCAAGCATAGACGCTTTACTCGTCGAAACACAGAGCCCTCCGTCA
ACAATTCCATCGCAATATCAAATACAACCATGAATGTGAAAGAGGAAGCG
CCTCCTCCTCCTCCCGTAAATTTGGCGGATATTTGTGACTCTCCGACACA
TGCCACCGCAGTTTAG

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