EMLSAT00000002486, EMLSAT00000002486-698333 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000002486
Unique NameEMLSAT00000002486-698333
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments
Table of all RNA interference experiments conducted using this feature, grouped by Phenotype CV: -Missing-
Gallery Image Title Gene or target symbol Sex/Stage Phenotype Datesort descending
AO F357 EMLSAT00000002486 female
  1. PreAdult2
 -Missing-
-Missing- 		16.01.2018 - 09:08
20.02.2018 - 09:08
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1484supercontigLSalAtl2s1484:2..385 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000002486 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000002486EMLSAG00000002486-685252Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000011060EMLSAE00000011060-719988Lepeophtheirus salmonisexon
EMLSAE00000011061EMLSAE00000011061-719989Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto767799auto767799Lepeophtheirus salmonispolypeptide
EMLSAP00000002486EMLSAP00000002486Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000002486

>EMLSAP00000002486 ID=EMLSAP00000002486|Name=EMLSAP00000002486|organism=Lepeophtheirus salmonis|type=polypeptide|length=72bp
GGFTEWTQWSQCTVDCLGDRGDQVRRRFCSNPVPRNGGLPCRGETKEKQF
CTGTIPKQVNNPSDICFYIGQK
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mRNA from alignment at LSalAtl2s1484:2..385+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000002486-698333 ID=EMLSAT00000002486-698333|Name=EMLSAT00000002486|organism=Lepeophtheirus salmonis|type=mRNA|length=384bp|location=Sequence derived from alignment at LSalAtl2s1484:2..385+ (Lepeophtheirus salmonis)
GGAGGTTTTACTGAATGGACTCAATGGTCACAATGTACAGTAGATTGCTT
GGGTGATCGTGGAGACCAAGTGAGAAGAAGATTCTGTAGCAATCCAGTAC
CACGAAACGGTGGCTTACCTTGCCGAGGCGAGACTAAGGAAAAACAATTC
TGTACTGGAACCATACCTAAACAGGTCAATAATCCATCTGATATTTGTTT
CTACAGTAAGTACCATGACAATTAAAATAAACAGCTCAGATTTTTATTTC
CAATCTTACCTTACCTTTTCAGTTGGACAAAAATAAATTAACCAAGAAAG
TCTGGATAATAATTAATAATGTTATACATATATGACTGTTTGTTATATAA
AATTTGAAATATACAACTATTAATTAAGCAAAAT
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