EMLSAT00000002548, EMLSAT00000002548-698395 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000002548
Unique NameEMLSAT00000002548-698395
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1505supercontigLSalAtl2s1505:1569..2945 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000002548 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000002548EMLSAG00000002548-685314Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000011302EMLSAE00000011302-720230Lepeophtheirus salmonisexon
EMLSAE00000011303EMLSAE00000011303-720231Lepeophtheirus salmonisexon
EMLSAE00000011304EMLSAE00000011304-720232Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto768145auto768145Lepeophtheirus salmonispolypeptide
EMLSAP00000002548EMLSAP00000002548Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000002548

>EMLSAP00000002548 ID=EMLSAP00000002548|Name=EMLSAP00000002548|organism=Lepeophtheirus salmonis|type=polypeptide|length=158bp
MSPNKMVGRRASKTRTTKKPEMKSVRRYYADPDTECQAFHVXAADGEGGL
AKYSFLCGNGTIFNQEAFICDWWFNFDCSQATALYSKNEEIAAERSTASG
GAAGGLIGSGSAPNSYGAPAPSGTGYPAPGLGPAPSAYGSPSPSPRPAPR
PGPATSGH
back to top

mRNA from alignment at LSalAtl2s1505:1569..2945-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000002548-698395 ID=EMLSAT00000002548-698395|Name=EMLSAT00000002548|organism=Lepeophtheirus salmonis|type=mRNA|length=1377bp|location=Sequence derived from alignment at LSalAtl2s1505:1569..2945- (Lepeophtheirus salmonis)
ATGAGCCCCAATAAAATGGTCGGAAGGAGGGCATCTAAAACAAGAACTAC
AAAAAAACCAGAAATGAAAAGTGTAAGGAGTATATAAGCAATGAAAAATT
ATTACTGACCATCACTTGAATTAGAGAAGTCTAATCAATCAATTCAAATA
AGGATGAAGTCTTTCCTAGGAATTATATATTTAACATTTATTGGAGCTTG
TTTTGGTGATAAGCTCTCAGCATATGGAGKATTTCCCTCTGAMCCATTRA
ATCAATNTTCWTCKGGTGGCCTTGKGGGNGCTGSCTCTYCCYYCCYYCCY
YTAGCCACTAGTCCCGTCATTGTTGATCCTATTGCTGCCCTTGAAGCGGC
ACTTCCTGGAATCCCCGGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNGAGACTTCTTTCTCTTGTGAAGGACAAGTTGAAGGAGGTAAAG
TAGAGGAAATATTAAAAAATAGAAATACAGGACATAAAAATAATACTATT
TTCAGGATACTATGCCGACCCTGACACCGAATGTCAAGCATTCCATGTAT
GWGCTGCTGACGGAGAAGGTGGACTAGCCAAATACTCTTTCCTTTGCGGA
AATGGTACCATTTTCAACCAAGAAGCTTTTATCTGTGATTGGTGGTTCAA
CTTTGACTGCTCTCAAGCTACTGCCTTGTACTCCAAAAATGAGGAAATTG
CTGCTGAAAGATCTACTGCTTCTGGTGGTGCCGCTGGTGGATTAATTGGA
TCAGGCTCAGCTCCTAACAGTTATGGTGCTCCAGCTCCATCAGGCACTGG
GTACCCTGCTCCAGGACTTGGACCCGCTCCATCTGCTTATGGTTCCCCTT
CTCCTTCTCCAAGACCTGCCCCTAGACCAGGTCCCGCTACATCTGGTTAT
GGGTCCCCTGCTCCTGCTCCAAGNCCTGCACCTGGACTCGCTCCWTCATC
TTATGGTRCCCCAGCTCCAAGKCCAGCACCAAGKCCCGCCCCTAGACCAG
CTTCTGCTCCAAGACCATCACCTGTTCCATCTGCTTATGGATCTCCTGCA
GCAAGACCAGCACCTGCACCATCTGCTTATGGATCTCCAGCTGGAATTCC
TTCTCCCATTCCTGTTCCTCAACAACCATTTTACCTTTCTTAAAAAGTCG
ATCCTTTGAAGGAATGTTTTTCATTCAATATCTAAATGTGTATATTTATA
AATTTGTAATCTTTTGAAAAGGTTCAGTGTATAAAAAAATAATAAACATA
AAATTATATTAATATATAGGTCATTAA
back to top
Add to Basket