EMLSAT00000002554, EMLSAT00000002554-698401 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000002554
Unique NameEMLSAT00000002554-698401
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s15088supercontigLSalAtl2s15088:7..726 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000002554 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000002554EMLSAG00000002554-685320Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000011320EMLSAE00000011320-720248Lepeophtheirus salmonisexon
EMLSAE00000011321EMLSAE00000011321-720249Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto767905auto767905Lepeophtheirus salmonispolypeptide
EMLSAP00000002554EMLSAP00000002554Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000002554

>EMLSAP00000002554 ID=EMLSAP00000002554|Name=EMLSAP00000002554|organism=Lepeophtheirus salmonis|type=polypeptide|length=190bp
MPAGNAKFLMDSVFELAQRLNQFNLSDAEIGIFCAVVIITPDRPGLRNPE
LVLKMQNKLKNVLNNILIPQHSDSPGIFSELLSMVHDLRTLNTLHTEKFL
QQCKINGSDMGGSSEGSTLQKHLLYGSKGSLHHNTHHWNGGSHSQLDRES
VGGGSPHSSSDAHSEHDRRSPIGSVSSSESGCSSEVSRLT
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mRNA from alignment at LSalAtl2s15088:7..726-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000002554-698401 ID=EMLSAT00000002554-698401|Name=EMLSAT00000002554|organism=Lepeophtheirus salmonis|type=mRNA|length=720bp|location=Sequence derived from alignment at LSalAtl2s15088:7..726- (Lepeophtheirus salmonis)
AATCTAATAACTGTCTTTTCTCCTCCACAGTCTTTGGTATGCTTAAATGG
GGACATTATTCGTAAAGAAACCATTAACCAAATGCCAGCTGGTAATGCCA
AATTTTTAATGGACTCTGTTTTTGAATTGGCTCAAAGACTCAATCAATTC
AATCTCTCAGATGCTGAGATTGGTATATTCTGTGCTGTTGTCATCATTAC
ACCTGGTAGGAACTCATTAATTCGTAGTTTGAATAGCGGATAACTTACTC
TTTCTTATTTCCCCACTCTTATAGATCGTCCTGGGCTTAGAAATCCGGAA
TTGGTCCTCAAAATGCAAAATAAATTAAAGAATGTGTTGAATAACATTCT
GATTCCACAACATTCAGATAGCCCAGGAATTTTTTCCGAACTTTTATCCA
TGGTTCATGATCTCCGAACTCTAAATACGCTTCACACTGAAAAGTTTTTA
CAACAGTGCAAAATCAATGGATCCGACATGGGGGGTTCATCTGAAGGCTC
GACCCTTCAGAAACATTTATTATACGGATCCAAAGGATCTCTTCATCACA
ACACACATCATTGGAATGGAGGATCCCATTCACAATTAGATCGAGAGTCT
GTAGGAGGGGGTAGCCCGCATTCTTCTTCTGATGCACATTCCGAGCACGA
TCGTAGAAGCCCTATTGGCTCAGTGTCTAGCTCTGAGTCAGGATGCTCCT
CGGAAGTGTCTAGACTCACT
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