EMLSAT00000002569, EMLSAT00000002569-698416 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000002569
Unique NameEMLSAT00000002569-698416
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1517supercontigLSalAtl2s1517:43790..47997 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000002569 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000002569EMLSAG00000002569-685335Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000011368EMLSAE00000011368-720296Lepeophtheirus salmonisexon
EMLSAE00000011369EMLSAE00000011369-720297Lepeophtheirus salmonisexon
EMLSAE00000011370EMLSAE00000011370-720298Lepeophtheirus salmonisexon
EMLSAE00000011371EMLSAE00000011371-720299Lepeophtheirus salmonisexon
EMLSAE00000011372EMLSAE00000011372-720300Lepeophtheirus salmonisexon
EMLSAE00000011373EMLSAE00000011373-720301Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto770497auto770497Lepeophtheirus salmonispolypeptide
EMLSAP00000002569EMLSAP00000002569Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000002569

>EMLSAP00000002569 ID=EMLSAP00000002569|Name=EMLSAP00000002569|organism=Lepeophtheirus salmonis|type=polypeptide|length=473bp
MDVGSKEWTQTVVEQLSPQAGEYASDVLHNQVEPIIQKVMHKNGLPGTFR
FDNIDFGSIPPKLQNVKTHKKKDVDESSVVIDGEFNYDGNCDLRVSLLGI
SSGVRDLRIFGRGRIVLKPTSKKALPFFVGGAQFYLLETPVINFDLDGIA
DICDWPFIRDRVRKELYEDMNKKIVYPNRITIPLSNNVDPMKFRSFAPLG
MLAVKLLRAKDLPSKGGIRSLVGQGSPDAYAKVCLGAYRFDSDVKKNSCD
PVWEDDGIWYEFLMELFEGHRLNIRLYDEDTFSRNEFLGEIFVDIQDEFV
SQGAENGQEIRLEKELLVNENKRSKYEIQGSLSIAMRWLPFGGSNDDYDG
PTELILSLFVHSCNNLVLNGDYDAKVNSYLKIFESNGPSPYKTEVEEDDQ
HPGFGYGKIFQFGKDWRDHSIDIRVLDVSGFVFGNVKLSLEELESSPIVK
RIKPINEENPAMTMTLSAFVKTL
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mRNA from alignment at LSalAtl2s1517:43790..47997+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000002569-698416 ID=EMLSAT00000002569-698416|Name=EMLSAT00000002569|organism=Lepeophtheirus salmonis|type=mRNA|length=4208bp|location=Sequence derived from alignment at LSalAtl2s1517:43790..47997+ (Lepeophtheirus salmonis)
CCTGGAGATACTTATTTTGTTCACTAGAAAAAAATAACTAGCTAGAGATA GAGCTTTAGCTATGGATAGAATTGAGTCAACTATTAACTGTATCGTCCAT TTACTTCATTGCTCATAATTATTTGTGACGTCAGTAAAAAGAAAAACGAT AAAAAAACAAATCTGGGATATGAAGGAATAAGAATTAATTAACTGAATTT GAGGACTGCAGCCATCAACTGTCTTAATTATAAAACTATATATGTTGTGT ACAAGGTGCGATGTCTGTACGAGTTGCAACTTGTATAAGCGTATTGTACA AGTTGCAATTTCTTTGTTATACTTAAACATTATTTAATTATAACATTGGT AATTTTTTATTGCCAACTATTAATTGATAATATTATTTCGTTTTGATTTT TTAAAACTATATGATTGTTATGTATTTATGAGTAATATAACTATTGGCAT TTGAACTTTATGCAATTTTTACTAAAAATAGCAAAAATCAGACCATCATA TCGAACATTCATGGATTATTCTATTATTGCATTATCTTCATTCCAAGTAC TGTAAACTATTCTTTTAAAACTATTCATCTCATTTTGTTATTGCTATTTG TACAATTTGACTGTACAAGTTGCACAAATACCTCCCTTTTAACTAAATTT ATAAATAATAAGATAAACTCTGTAAACGGAAGAAAAAATTTCTTATATAA TAAGTGGAAATTATTAAATATGTTAAAGTAAAGTGACGTAATGAGTTTTA TAATAACAAGTGACATCTGCCGTGAAAAAAATATAACTCTACGACGAAGT ATTTCCACTTTAAAGCAACAGTAGATTAGACAAAATGAGTAGCAATCTGA GAGTTAAGACTTAACAACAGCGCTGTCTATAAAAAATAACAAAATTATTA TATCTGTAATTTTACTATTTTAACTCTAAATAAAATTAAATAGTATTAAG AGAAATATCATCATTATACTTCTAATGAGATATTGAATGAAATTATGAAG TACCTAAATCATTCTCAAAACATATTATTACGTACTTTAATTTCCTTAAA AAGTATCAAAAAAGATGACGGAACTTTTTAATAGGATCTCAACATAAACC TTATCATTTAAGGGTAATTTTTGAGGCCCATTTAGATATTATACTCAATG AGTGTAAAGATATCAAAATAAAATCTTTCCTTTTTTAATTTTATTATGTT TTTGAAAAACGGAAGTGTCGAGATTCAGTTCCTAGAGCTTAAAATCGTAA TTTTTTTTTACTATCATCAAATATTAAGTCCTAAAAGAAATGGAAAAGTA GATTTTTTAAATTTCGAAATCTTACTATTTAGGCCTAATGAAAAATTTCA CCTACCCTAATACTCATATTAATTGTTAACATACTTAAATAAAAGGTCTA TGTTCTCTGTTCATGCAAATATACTTTATGATAATTTAAAACTAAGGATA CAATATTSAATGGTTGATTTATATCTTTAACGTAATATTTATAAATCCAA TAGTACATTTTTCTCAGTTTTGCCTTAGTTTAACATTTATAAGGTAAAAT TACTTCAGTTGACATATAGTTAATAGAATTAAATCTTCTCATTATTAGTT GTAATTAGATTTACCAACATTGATTGTTAAGAATTTAATCAAATTCTACA ACATATTATTTTAATATATAGTTTCACCTATAAATCTGTAATACAAATCC CTTAACCCATGGATTTATCCACTGTTTAGAAATTCGATCATAGTCAATGG TTCTTATCATAATTTTAACAACATAGTTTCTTATCTTTCAAATTATATTT AGCGAAAAAAAGAATTAATAATAGAATAAAGCAACTTATACAGCACGTTC CCCAAAAATAGAGTATGAATGAATATTATATTAGTCATAGGTGACATCAT TACTCTCACAGAGTAGAAGACTAAAGAAGTGAGCTGCTCCGAACATTGAA TCATTTAGCATATTCCCTCTTAAGTCAAAAAAATGGACGTCGGAAGTAAA GAATGGACTCAAACTGTGGTGGAGCAACTTTCACCACAGTAAGTATACTG TTTCCATTTTTTTAAGTTCACCTATGAAGTACTTATGTACTTAGAGTACA AAAACTAATAATATTGACTTCGTAAGTTGATTGATAATAATTTGAAATAT TATTATCTTTTAAAATAGGGCTGGTGAATATGCATCAGATGTTCTTCATA ATCAAGTGGAACCCATAATTCAAAAGGTGATGCATAAAAATGGTCTTCCT GGAACTTTTAGGTTTGATAATATCGATTTTGGGAGTATTCCTCCAAAGTT ACAGAATGTCAAAACACACAAAAAGAAAGATGTTGACGAGTCAAGTGTTG TTATTGATGGAGAGTTTAATTATGATGGAAATTGCGATTTAAGAGTTTCT TTACTTGGTATTTCTAGTGGAGTCAGGTGAATCACTATTAAAAATATAAT ATCGAATATATTCCTACCTATATTTGTAACATCTTTATGAATAGGGATTT AAGAATATTTGGACGTGGAAGAATTGTTCTCAAGCCCACATCGAAAAAAG CTTTACCCTTTTTCGTGGGTGGGGCTCAATTTTATCTGTTAGAGACACCT GTCATCAACTTTGATCTGGATGGTATTGCTGACATTTGTGATTGGCCATT TATTCGAGACAGAGTTAGGAAGGAGCTCTACGAAGATATGAATAAAAAAA TTGTATACCCCAATAGAAGTAATGTCTTAATCCTATTTTGACAAAGCCTA TATTAAAAGGATTTATTCTAGTAACAATTCCTTTATCAAATAATGTGGAC CCAATGAAATTCCGTTCATTTGCTCCTCTTGGTATGTTGGCAGTCAAACT GTTGAGAGCTAAAGATCTTCCGAGTAAAGGAGGAATAAGATCTTTAGTCG GCCAAGGATCTCCGGATGCTTATGCAAAAGTGTGCCTCGGTGCTTATCGA TTTGATAGTGATGTCAAAAAGAATTCATGTGACCCTGTTTGGGAAGATGA TGGTATCTGGTATGAATTTTTAATGGAATTATTTGAAGGGCATCGGCTCA ACATTCGTCTCTATGATGAAGATACATTTAGTCGAAATGAATTTCTAGGT GAAATATTTGTAGATATTCAAGACGAATTTGTAAGTCAAGGAGCGGAAAA TGGCCAGGAAATTAGACTAGAGAAAGAATTGCTCGTCAATGAAAATAAGA GATCGAAATACGAAATTCAGTAACTAACTTTTAATATTCATTTAAGTGAT ATCATTATCTAATTTTTAACCATTTTTATTATTATAGAGGGTCATTATCT ATAGCCATGAGATGGCTTCCCTTTGGAGGTTCTAATGATGATTATGATGG ACCCACGGAACTCATTTTATCTCTTTTCGTACATTCTTGTAACAATCTAG TCTTAAATGGTGATTATGATGCTAAAGTCAATTCGTATCTGAAAATCTTT GAAAGTAATGGTCCTTCTCCTTACAAGACTGAAGTGGAAGAGGATGATCA ACATCCTGGATTTGGGTATGGTAAAATATTTCAATTTGGCAAGGATTGGA GGGACCATTCAATTGACATTAGAGTTTTGGATGTATCTGGTTTTGTTTTT GGAAATGTTAAGTTATCTCTTGAAGAATTGGAAAGTTCCCCCATAGTAAA GAGAATAAAGCCCATTAACGAAGAAAATCCGGCTATGACCATGACTCTAT CTGCTTTTGTTAAAACTCTTTAGACATCATTCTAACTGGATTAGGAGATG AAAATTGTCGTTTTATAATCAGTCGCTTTCCCATAATGCCTAAAGTTTTA TTTCTCCTTGCATAATTTTAAATAATTTTATTTATCTATTTCTTTATATT TTATGATTAGTCATTTCTTCTTGTTAGTCATCTCCATATATTTTATACTA AACTTTAAAGACAGTGAATAAGAGATATTGCATTTTTTTACACTTTATAT ATTGATAAGWAGTGAAACAACATGACTTTTCAATTCAAAGACTTATTCTT AACCCAGGTGATATTTAGCAGAAGAAAATTAATACTGTACATAGTTAGGC AAATAAAAAATGAAGATAACAATTACTGTGTTACTTACTTAAGTTACTAA TAAAAATAAGTGAAACCCCAATCTTAACTTTCAAATTAATGTTTCTATCA TATGTTATTGTTATAAATTAGAATATGAAATATTGGTATAATAAATTTTT AAATTTTG
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