EMLSAT00000002588, EMLSAT00000002588-698435 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000002588
Unique NameEMLSAT00000002588-698435
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s151supercontigLSalAtl2s151:1367404..1369957 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000002588 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000002588EMLSAG00000002588-685354Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000011436EMLSAE00000011436-720364Lepeophtheirus salmonisexon
EMLSAE00000011437EMLSAE00000011437-720365Lepeophtheirus salmonisexon
EMLSAE00000011438EMLSAE00000011438-720366Lepeophtheirus salmonisexon
EMLSAE00000011439EMLSAE00000011439-720367Lepeophtheirus salmonisexon
EMLSAE00000011440EMLSAE00000011440-720368Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780696auto780696Lepeophtheirus salmonispolypeptide
EMLSAP00000002588EMLSAP00000002588Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000002588

>EMLSAP00000002588 ID=EMLSAP00000002588|Name=EMLSAP00000002588|organism=Lepeophtheirus salmonis|type=polypeptide|length=264bp
MWNIYIVLFLLTVFEGAYSELSYAQCRIIHDKYSYEEIVSRNILGGEVWP
NNTVPYILAEGFSKDDLSLIQSAMDGIEKKTCVRWVPRNGENSYVYIKND
EAGCFAVLGYNEYRGKHVLNLQRSNGFSTCMIFGIAQHEMLHILGYDHEQ
TRPDRDSYVRIHWDMIQRDAISNYFRSIYDNTTIIPPKCKPKSTATTFDD
CYSGFTTDTFGYPYEYGSVMHYGLDDFQTSDKNTMEVLRPVPLGIRIGQR
IGMTELDALKVIKC
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mRNA from alignment at LSalAtl2s151:1367404..1369957-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000002588-698435 ID=EMLSAT00000002588-698435|Name=EMLSAT00000002588|organism=Lepeophtheirus salmonis|type=mRNA|length=2554bp|location=Sequence derived from alignment at LSalAtl2s151:1367404..1369957- (Lepeophtheirus salmonis)
ATGTGGAACATATACATAGTTTTATTTCTTTTAACAGTATTTGAAGGAGC
ATATTCCGGTAGATTCAATTTCGTGTAAGTCAAAATCTTTCTCAAATAAT
CAATATCTTCTATACTAGAACTGAGCTATGCTCAATGTCGAATCATCCAT
GATAAGTATAGTTACGAGGAAATTGTATCCAGAAATATATTAGGAGGAGA
AGTGTGGCCTAACAATACTGTTCCCTATATATTAGCTGAAGGATTCAGTA
AGGATGATTTGAGTTTAATCCAATCTGCTATGGATGGAATAGAAAAGAAA
ACATGTGTGCGATGGGTTCCTAGGAATGGTGAAAATAGTTATGTTTACAT
AAAAAACGATGAGGCAGGATGTTTTGCTGTCCTTGGTTATAATGAATATA
GAGGAAAGCATGTATTGAATTTGCAAAGAAGCAATGGATTTTCCACTTGC
ATGGTAAGTAGAAAAATAAGAGCAAGTTTTCTTGGTAAATCCAAAGATTT
TTTAAGAACCTATTGTTCATTTATAAAACAAACGTCGTAACTATAAATAT
ATTCTATAAAATAAATAGATTCTAATATATAATTCAGGTAAAAAGGGCCT
CTTAAACATAACTCCTTGTCGAATTGAACGACTAGACGGAGACAATTAAA
TATTTAAAACAATTGTATAAAAATATAAATTCCCAACAAGTAGTTATGCT
TCAAAGAAAGTTAATTTTATAATTGGGAGTCAATTTTTGGATAATTATCT
TTTTCTTGTTTTCTTAGAGGATGTTATTTTAAGTCTAGCAAATGACATAA
GTATTTCGCTAGTTTTCTTCCTTTTAAATATGTGTCAAATTCCTTAATAA
TATATAGACATTTATACCTTTATCCACATCCCAAAGGGGTTTCCCAATGT
ATTGCTAGTAGCTTTCTTAAGTATATGTGTCAATCCACAGTAATCTGGTA
AATGAATTTAAAGTTCCACGGATATACCTTTCCCAAATACGTCATTTTAA
AGGATTTCAATTTTTTTAATATTACTCTGGAGCCCCTGGAGTCAATATAT
TCAAGGTCTTATCCCCTCTTATTCATTTTAATTTCTAAATGTTCTATCTT
CGTTGCCAACATACAATAAAAACATTATTTTTCTTTAGATCTTCGGAATT
GCACAACACGAAATGCTTCATATTCTTGGATATGATCATGAGCAAACACG
ACCTGACCGAGATAGTTATGTCAGAATACATTGGGATATGATTCAGAGAG
ATGCCATAAGCAATTATTTTAGAAGTATTTATGATAACACCACTATCATA
CCACCCAAATGCAAACCCAAGTCAACTGCAACAACCTTTGATGATTGTTA
TTCAGGTTTTACAACTGACACTTTTGGGTATCCTTACGAATATGGATCTG
TGATGCATTATGGACTGGATGAGTGAGTCGATAACTAGTTCATCACTGTC
TCTTATTTTTATATAACTTCAAAATAGTTTTCAAACGTCAGATAAAAATA
CAATGGAGGTACTCAGACCTGTACCGTTGGGAATTCGAATTGGTCAAAGA
ATAGGAATGACAGAATTGGATGCATTGAAAGTTAAAGCCAAATATAATTG
CGATCGATTATCAACTCTTTCTACAACATCACTGACAAATGCTACAACAA
CAGGTTCAAAAAGTATAAAAATTATAGGGATGGGTCTTATATATTTTTTT
TGGAAAAGGATAGATACGGATAATTGAACTTCGGACTCGGGTAGAACCGG
GTATTTTAATACTCATAAGTATTTTGTATCTACATAAAAATATTACATAG
ACTTAATTGTAACGAACCTGAGTACTAATGCAGAGGATTTTGGAGGAGAT
CATTAAATTATCTGTGGTCACTTATCCAATGAAGGAAATAAACACAAAAT
TATTTCTTTATTTTGCGAATATATATGCATAAATTACCGATTTTGATCCT
CAATTCTACTCCGAGTCCAACTCCTAAGCGTTACTCTAAATAATTCATAA
TTAAAAACATTTCTGGTTCCACTTTATGGTTTATAGTACGTTTATGTTCT
CTACTCAAGAATACTCCTAACAGCAATGGAGAATAAAAAATCATATATTC
ATGTAGCATCTACAAAAAGACATTATTTTCATCTATGAAAATAGTTATAA
AATGAAAGAGTATTCTATGGTTTAGTTATCACTTGTGTACAAAAGTACTC
AAATTGAATAGATTAATACTCCGAACAACCCGCTACCAGGGATCCCCAAT
AAATAAAGATACAAACACTTTTTTTTAAGTTTTATCAGTCAGGTTACCCG
TTTTTGCATGTCATACGCACGTATTTTTTCAATTGATATTCCGGGTACTA
ATATATTTAATAACTAAATTTAAATTTATCGTTTCAGTTTGTGAAGATAA
ATGGACATTCTGCGACAGCATGACAGAATTGTGTTCCCTTGAACACACCA
GCGAGAACTGTCAAAAAACATGTAAGCTGTGCCTAGAAGACATTGATACT
ACAACAACTTTTACCACATTTAACACAACCNNACTTCAGGTAATCAAATG
TTAA
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