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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s15 | supercontig | LSalAtl2s15:983432..989749 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000002778 >EMLSAP00000002778 ID=EMLSAP00000002778|Name=EMLSAP00000002778|organism=Lepeophtheirus salmonis|type=polypeptide|length=563bp
MTAALGVDIRNLVQLSCENLRNVLNQIHGNKDLIIDPTLMKPLDTVAGMS
ILKSLGVKKIFKFETKACPSIAYSRVYLLSSSLINAKDVIHHFRDKKTSE
GEFHIIFLPRILHSIRELFEEEGVYDQIYLHNYMWELIPFDEDLFSLELP
CLFSQVFLNGDSSLLPSVSYSLMSIESLYGKITNKVAIGSHAVNVLKQLD
VISPSTPQTFNSYFEYAFIMDRDIDYVSTLLSPLTYESLLDEVFGINCGS
IELDSRVTTSDKVVKLQLSNKDKTFTKIRNKHIGDIFSYLSVHARQLKQH
QKRAENLSVSEMKNFVQNNLKDIQNQYKALSLHIGASEVIQKEKGSFFES
MLHIEHGIVRGQCLKEAIQIIEELMAQLCSMDIVIRLMALASICHNGFSS
GDYESLRRQFVQAYGFEKMHILRTLQKRGLVFKKDSNRKHSFQTFATKVN
LIPKSQESVSLTEPSDPSYVFNGAYTPLISRIVESFMGKGNQTEFMSHLT
HLSTRIQFQNKPNRSKFVLIYFIGGYTLAEVASLKILQTIMGHHFVIAGT
SNTTGKKIMESVL back to topmRNA from alignment at LSalAtl2s15:983432..989749+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000002778-698625 ID=EMLSAT00000002778-698625|Name=EMLSAT00000002778|organism=Lepeophtheirus salmonis|type=mRNA|length=6318bp|location=Sequence derived from alignment at LSalAtl2s15:983432..989749+ (Lepeophtheirus salmonis)
AAATATTCGGGGCAAGGCTGAGTACTACCGCTAGTCATTTATAAAGGTGA
AAAGTATTTCTATAAAAGACATTTTTCTTGCATTAAAAATCATATTTATG
TGCTTCATTAAAAAAAGTGCATAATATATCATATCAATAATTGTAAGGTA
AAAAAAGATAACGGAATTACTCCTATATATAGCTCCGTTTTTAATAAAAT
ATAACATTAATACAGTAGACTTAGTTAATGTCTACTATTTAATTGTACGA
ATTTTAACTTTAATTTAAAAATATGACGTGTGACGTCATATGCCGGCCAT
GTTATTTGTTTATTCTCTTTCTTCTTCTTCTTCTTTAAAACAATTACAAA
CAACTTAAAAAAGCGGGGTATTTGAAAAAACTAAAAAAGGGTGATAATAA
TCGTTATTGTTTTAGCCCAAAAGTGGGACTCAACAATGATTGAGTATTAT
TAAGACTTCATACTATTAAATGGAGATACAGCTAAGGAATAAATGAAGAA
GAAAAAACATGGATATATTAATTAATAGTTAGGGGTTTTGATATTAATTG
GTCTAACGAGTATAAATCGTTCTGCATAATATATATGGAGCCCGTCAACA
CAAAACAAGCTAGAATTATTTTCCTAATATTGAGTATGGACTAAATTTGT
AGCCAAAATGAATCGTCATAATAAAGAATGAGACATTGTATAGATTTCAA
GGTTGAAATGGCCCATATTGGAGGCAATCTATAATCAAATAAAGGTTCCC
AACTATAGCGCAAATTATTGGCTATCATAAGTCATCCCAGTCATTTTGAA
TACAAAGCTAATGATTGACTCAAATGTATTTATGAAATACTAGCTAAGGT
GCTACGGGGTAAAAGGGGGGGGGGGGGGTGAGGAAGAGGGAAATCACATT
GAAAATGGTCAAATTAATTAAGAAAATTACAAAAATATTCAGAAAATACT
TCTATATACTAATATTTATAATATGAATCTTTCGTTGTTGTCAAAAAGAT
CCTTATAACTCTAATTATATTTATCTGAGATTCTTCAGACTATATCAATC
TGGATAAGTAAGGTAGTTTACAACGTCTCATCATAGCAACTTCACCCCCG
AAAAAAAAAATTACTCTTATTATTGCCTCTTGTAACCTTAGAATTATTAT
TATGAATATTAAAAAAAATAATGTGTTATTAACTTCAAATAACATCCCAA
CATATATGCATCTATATGAGAAGTCAATTTTCTATTTACTTCAAAAAATT
CCCAAATCGAATTTCGCGAAGTAAATGACAAAAAACTTTTTTTGCAATAA
TTTTGCAAAAAAAAAAGGTACTTCCATTTTCTGGAATTGTAAAAGAAGCA
CAAMCCTACCGATATTTTTTCCGTACTTGCAAAAACTAAAAAAGTGATGA
AGAATCATATTGTCGAAAAAAAAGCAAAGAAAAAGCCCTGGATCTGGTTC
ATTCTTGCAAATATTGCAAAAATTATATATCAAAATGTTCCAGAAATTGA
AAAATGTTTCAATAAACTGTACGACTCCAATTTTATGTCCAAAATGTATC
GTTTATTGGCATTTCTTTTAAAAATATTGAAAATTGACGTTTGATGAAAA
AGGGGGGGGGGGGAAGAGAGAAAAAATTGAAAAATTATTCAGAAAATRAC
AGATYTTTCAGTTAAACATCAATTTTTATTTGGCAAATTTATGTGCAAAC
CAATCTCCAGACAAATTTCAAAAAGCTTGGAAGTTCATTTTTTTTTTTTG
CAGCTGAAATAAACGAAATGGCAATTTTCACCGATTTCTTTTTTGATTTT
GAATAAATTTAGAAAACGTAACTACGTATTCATATAATTGTTGTTTGAAA
CGCCAATCTCTTTTTGATAAATACCTCAAACCCCTATCTAGTCTCCATGA
GCTGCAAAGAACGGTTTTTGTGTTTTGGGAATAGCATAAGCAAATCCACA
GCCCCGTCTTAGCACGTCCAAGCTCAAAAGAGGGACCCATGCAAAATTTC
AGCCCCCTAGGTTCAACGTGGACGTCTACGCACACACACAATCTCTCTTT
TATATATATGTAGAAGATTATATGTATGAATTAAGCAATTAAATTGGATA
TCTTCCTTTTGTTTGATATATTTTCAAGATTGTTTTTATGTTGAGATATA
TAAAGAAAAGAGAAGAGAAGAAGAGAGGTGAAAAAGGAAGAATTTTCAGC
TGTTGTGATGATTTAGCGAAAAAAAAGAGATAGAAAGAGAGAGAGAGAGA
GAAGAAGAAAGAATATCGTTTCCCTAATAGGAATCAATTTACGTTGGGAA
GTGATTTGCTTTGCTCATCTTTTGATAAAGTCAGGTAATTAAGAGACGAA
CTCAGGATGCCATCTCCCACCTCCATTGCACAAGGTCTCCAGCGTATCCC
GGATCTGCAACTGGCGCAATCCCTGTTCATGCTGAAGGAGAAGCCCTCGA
AAGGTGTGGATTACGGGAAAATGAAGGAGGATCTGATGGAGAGCATCAAG
AAGAACGACATGTGTCCTTTTTATCGGCATGTGCTCAAGGAGTTGGAGTG
GAAAGAGGACGCCGCACTCGTCAAGGAGTTGACGGCCAAGAATGAGGCGG
TCCTCAAGGAAATGGAGGAGAAGATCAAGGACGCGGAAGTGAACTTGGGA
GAGAGTGAAACGCGGGAGGCGCTTTTGGCTCAAGCGGAATACTTGACCAA
GATCGGAGAKAAGGATCGGGCTCTTGAAGCCATTCGAAAGACCATGGAAA
AAACCGTGGGGCTCGGGAACAGGATGGATCTCATCTTCCACAACATTCGT
CTCGGACTCTTCTTCATGGATCATCCCCTCATCAAGGTACGGCCTCATAT
CGTCTCCTATTCCACAAGGGGATTGTGTCGCTTACCAATCTATTATTAGA
TTATTAGTTGACGCTAATTGAGTATTTGCCTTCATTGACCTGTCGTGACA
GCGATTTGTAGGCTTGGGACATTTTGGTATCACTCGTTTGATATGTGAAA
AATAGTATTGAGTTATAAAGTACCATTGGAGCCCATTTAAAAAAAAATAA
GAGAAGTAATGTTATGCAAGACAAGTCTTTGGTAACTACTGAATCTATAT
TATCCTAGATTTTCTATCTAATGTAATGCCCAAAGAAGCAGACTTTGGGT
CGCACTCTCTTTAAAAAGTACATAAGTCATAACCTAACAGATTCATTCAT
TCATGCGTCTAAGTCTGAATACGCTCTGTATTTTGCATTCCCTTCTTCCA
AAATGGAGCAACTTATCCAAATTTATAAGAATCTTATAGCGACACAATTC
AGATATGGAATATTTTGCTCCGTGTATCGGTTTTCTGATTTCCATCTGAT
ATTAAATTTAATAAGTACATTTCTTTATTTAACATCTCAATTTATCCCTA
GGCCAACATAGAAAAGGCATCCTCCATGCTCGAAGAAGGAGGAGACTGGG
ATCGTCGTAATCGCCTCAAAGTTTACGAAGGTCTCTACGCCATGGGAGTC
AGAGACTTTAAAAAAGCCGCGGGTCTTTTCCTAGAAACCATTTCTACCTT
CACAAGTTATGAACTTATGGACTATGTACAGTTCGTTCATTATACTGTAT
ACTCCAGTGTGATTGCTCTGGATCGTGGAGATCTTCATAATAAAGTCATC
AAGGGCTCTGAAATTCTTGAGGTTCTCCATGATTGGCCAGAAGTGAAAAA
GTATTTGTTTTCCTTGTATGATTGCCATTATGGCGAGTTCTTTCAACGCC
TTGCATCTGTTGAGAAAATTCTGAAAGCAGATCGCTATCTTTATCGTCAT
TMTGCTTTCTATGTTCGAGAAATGAAGATTAAAGCATTTGCTCAACTCTT
AGAGTCTTATAGAAGCTTAACTCTGTCATATATGGCTGAATCTTTTGGAG
TGACTGAGGATTATATGGATAAGGAATTGGCTCGATTTATCGCAGACGGA
CGACTTCACTGTAGGATTGATAAAGTTCGTGGKATCGTTATCACTAATCG
GCCGGATTCTAAAAATTCACAATACCAATCAACTATCAAACAAGGAGATA
TTTTACTCAATCGTGTTCAAAAACTATCTCGTGTCATCAATATTTGAAGA
AATCGTCCTTATTTTAAAAAAATATATATTTTATAAATTAATTATTCGCT
TATGAATGGATACTTTTGTTTCTTCAAATCTTTCAGACTGTAAAAAAAGA
AAAAAAAATGGATTGCTATTAAACCTATAGTTTCACGAAATATAACTTGT
AAAAGACATTTTCAGTTTTTAAGTCTATTATTGTAAGTGAACATTTCTCT
TTATTCTAGAAATGACGGCAGCACTTGGAGTTGATATTCGCAACTTGGTC
CAGCTCTCTTGCGAAAATTTGCGGAATGTTTTGAATCAAATACATGGCAA
TAAAGATCTCATAATTGATCCTACCTTAATGAAGCCGTTAGATACTGTAG
CTGGAATGTCAATACTTAAATCTTTGGGTGTTAAAAAAATATTCAAATTT
GAGACTAAGGCTTGCCCATCTATAGCCTATTCGAGAGTGTATCTTCTCTC
TTCCTCCTTGATTAATGCTAAAGATGTGATTCATCATTTCCGAGACAAGA
AAACTTCCGAAGGAGAATTCCACATCATCTTCCTGCCGAGAATACTTCAC
TCTATTAGAGAGCTTTTTGAAGAGGAAGGTGTATATGATCAAATTTATTT
GCATAATTATATGTGGGAGTTGATCCCCTTTGATGAGGATTTATTCAGTC
TGGAACTTCCGTGCCTTTTTAGTCAGGTATTTTTGAATGGAGACTCATCC
CTATTGCCATCAGTATCTTATTCGTTGATGAGTATTGAGTCCCTATACGG
AAAAATTACAAATAAAGTAGCGATAGGATCTCACGCTGTGAATGTGCTCA
AGCAATTGGATGTTATATCTCCGAGTACTCCACAAACCTTCAACAGCTAT
TTTGAATATGCCTTTATTATGGATCGTGATATAGACTATGTTTCTACACT
TTTATCTCCTCTCACTTATGAATCTCTATTGGACGAAGTATTTGGTATAA
ATTGTGGCTCAATTGAACTAGATTCCCGAGTTACTACATCAGACAAGGTT
GTCAAACTTCAACTTTCAAATAAGGACAAAACATTTACCAAAATTCGAAA
TAAGCATATTGGTGATATATTTTCATATCTCAGCGTTCATGCCCGACAAT
TGAAGCAACATCAAAAAAGAGCCGAGAATCTTTCTGTTTCTGAAATGAAG
AACTTTGTTCAAAACAATCTAAAAGACATACAAAATCAGTACAAGGCTCT
TTCACTGCACATCGGTGCAAGTGAGGTTATTCAAAAAGAGAAAGGTTCTT
TCTTCGAGTCTATGCTTCACATAGAGCACGGTATTGTTCGAGGACAGTGT
CTAAAAGAGGCTATTCAAATTATTGAGGAGCTGATGGCCCAACTCTGTTC
CATGGATATTGTCATTCGGCTCATGGCATTGGCCAGTATTTGTCATAATG
GATTTTCTTCTGGGGACTACGAATCCCTTCGTCGTCAATTTGTACAAGCT
TATGGTTTTGAGAAAATGCACATTTTAAGGACTCTTCAAAAAAGGGGTCT
CGTTTTCAAAAAGGATTCAAATCGTAAACATTCCTTTCAAACCTTTGCTA
CTAAGGTTAATTTAATTCCAAAAAGTCAAGAGAGTGTGTCTCTCACGGAG
CCCTCGGATCCTTCATATGTTTTTAATGGAGCCTACACTCCACTTATCTC
TCGCATTGTTGAGTCTTTTATGGGCAAAGGGAACCAAACTGAGTTTATGA
GCCACTTAACTCATTTGAGCACAAGGATTCAATTCCAAAACAAACCTAAT
AGATCTAAATTCGTTCTCATATATTTCATTGGGGGCTATACTCTTGCTGA
AGTTGCATCCCTTAAGATCCTTCAAACCATCATGGGGCATCATTTCGTGA
TAGCTGGAACTTCTAATACCACTGGAAAAAAGATTATGGAGAGTGTTCTT
TGAATTATTATAGTTATTTAATGTTAATTTTGCACATTCCACCTTCTTTG
AAAATGTATTAATAACTGAAATTTTTTATAGTCAACGAAGAGATAGTATT
TTAGTTTTTGAGACGATTTTAATTAATTATATTTTATATTGATAAATATA
TTCTTTATCGTTGATCGTTTATTTATCAAATTAATGTTCTAATTTATAAA
TCACCGGAATCATAGGATGGGCCCTCGCTAGGATTTTATTTTGTGGATTT
GATTTGTTTTCTTCAAATTTTTCGACTGTCAGCCCATTATTTCTTACTCT
AACTAAATAAGAATAAAA back to top
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