|
|
Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s160 | supercontig | LSalAtl2s160:520470..523461 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000002785 >EMLSAP00000002785 ID=EMLSAP00000002785|Name=EMLSAP00000002785|organism=Lepeophtheirus salmonis|type=polypeptide|length=422bp
MQKSSRKINYICGEGCKGPQNEFQCIGHGDCLPKQLRCNGIYDCRDGSDE
LLCDKEGFEKETCQELQCPNGQCIPSDRKCARKIDCPESYDELDCHSTSL
HCTDNEFYFVKDARCIASSFRCDVCDGVEDCPDLSDEFNXLKATTNGEIQ
IRNNNDTWSTICFNKDSSLEFAKASCQQLGYASAKFESTTLENKESSNYK
GFSSNVSLTDIKKIDAKILDDIPACDSNPKTICEEFECSKRTLTERQIKE
LKAQGTINITSLTSENELWPSLAYLFNRFSNIFYNRSMDPLEWVAFAGPA
NGQTDQSKTQIKIVKRIVSNPSVRFQQGYYTDDLALIELNDPLIFNDHVQ
ATCLEESTLEDNICFVAGWADVNKEGVSFIQYLDRIPLPMMSQEECNSQS
HYNKLLNGNSLCTSSKHQNIPV back to topmRNA from alignment at LSalAtl2s160:520470..523461+ Legend: polypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000002785-698632 ID=EMLSAT00000002785-698632|Name=EMLSAT00000002785|organism=Lepeophtheirus salmonis|type=mRNA|length=2992bp|location=Sequence derived from alignment at LSalAtl2s160:520470..523461+ (Lepeophtheirus salmonis)
ATGCAAAAAAGCTCAAGAAAAATAAATTATATCTGTGGGGAGGGCTGTAA
GGGCCCTCAAAATGAATTCCAGTGTATTGGGCATGGTGATTGTCTTCCAA
AACAGTTGAGATGTAATGGTATTTATGACTGCAGGGACGGATCTGATGAG
CTTTTATGTGACAAAGAAGGTGAGTTTAAGTTAAAAATTTTAGTATSAAT
ATTATTTATCATATAAAAATAAATCTAATGTCGAATGTTATTCTGCATTT
AGGGTTTGAAAAAGAAACATGTCAAGAGTTGCAATGCCCTAATGGTCAAT
GTATTCCTTCTGATCGGAAATGCGCTAGAAAAATAGATTGCCCTGAATCT
TATGATGAATTAGACTGTCATTCAACTAGTTTACATTGTACAGATAATGA
ATTTTATTTTGTAAAAGATGCACGGTGTATTGCATCAAGTTTCCGATGTG
ATGGTACTTCAGATTGTGTAAGAGAGGATGAAGATGAACGAAATTATAAT
TGTGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAA
AAGTTTGTGATGGAGTTGAAGATTGTCCAGATTTATCTGACGAGTTTAAC
TRTTTGAAAGCCACAACAAATGGAGAAATACAAATTAGGTATGTTTTTAC
TCTGATAGTTTTTACTTCATTTTTAAACAAAATGTTATCGATTTTAGGAA
CAATAATGATACTTGGTCAACCATTTGTTTTAATAAAGACTCATCTCTCG
AGTTTGCAAAAGCTTCTTGTCAGCAATTAGGATACGCTTCTGCTAAATTT
GAAAGTACTACCTTAGAAAATAAAGAATCATCTAACTACAAGGGTTTCAG
CTCCAATGTATCTCTAACCGATATTAAAAAAATTGATGCAAAGATCTTAG
ATGACATACCAGCTTGTGACAGCAATCCCAAGACAATTTGTGAGGAATTT
GGTATGTTTATTATCCCATCTACTTTTTCTTTAATTATTTGTGAATATAT
TTATTTATAGAATGTTCAAAACGAACACTTACTGAGAGACAAATAAAGGA
ATTGAAAGCCCAAGGCACCATCAACATTACCTCTCTAACCTCAGAGAATG
AACTTTGGCCTTCTTTAGCGTATCTATTTAATGTAAAAAGGAAAACAAGT
TGTGTTGTTACAATTTTAAATCCCAAGTGGTTGATTACMTCGCATNGATG
TATGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNTGAGAGGTTTGTAACCATATTCATTT
ATTTCAAAAGAGGTTTTCTAATATTTTTTATAATAGATCAATGGATCCTT
TGGAATGGGTAGCCTTTGCTGGCCCTGCCAATGGACAAACGGATCAATCA
AAAACTCAAATTAAAATAGTAAAGAGAATAGTTTCAAATCCCTCAGTACG
ATTCCAGCAAGGATATTATACTGACGATTTGGCTCTTATTGAACTAAATG
ATCCTTTGATCTTCAACGATCATGTTCAAGCCACTTGTTTGGAAGAGTCT
ACACTGGAAGATAACATTTGCTTTGTAGCAGGATGGGCAGATGTAAATAA
GGAGGGTAAGTCAAGCAGTAGCTCATTGATTAGTAATTATACTAATATTT
GATGATTTTTTTACATATTACATTCATAGGTGTAAGCTTTATACAATACC
TCGACAGAATACCCCTTCCAATGATGTCGCAAGAGGAATGTAATTCACAG
TCACATTATAACAAATTACTAAATGGTAATTCTTTGTGTACTTCCTCTAA
ACACCAAAATATCCCNGTGTAGAGTAAGTTTAATAGCTTTCAAATATAGC
CAAGGATGTGAAATATGCAATCTTCTTWCATTTTTAGATGGACAGTGGAG
CGCCACTTTTGTGCTACCAGGGTGATAGATGGAGACTTCGTGGTATTTTA
AGTAGGGAAGGGGAGTGCCTTCCGTCAACTCTTCCAGATATTTTCACATC
TGTTGATTCATGGAAATCATGGATTAGTAATTTTATTGGAGAAAACGAAT
CATAATCGTAATAAATATTTATCCAATATGAAAAAAGACATTTGACATAA
TGACTTGCAAAAATGAAGATAACCCCAAAAAAAATAATGACATCCTATGT
CAAGGCTGTGATATGTTGTTATTTTTTTTTTTTTTCATCGNTTTTTGGGT
TGAATAAATCTCGTCCATCATTTGTGATATTGTTTTCCTGCTCTTCAAGC
CTTTCATTCGTGCAATTAAGTAACTTGTCGTGGATGTCCTGTTTCTTCCT
TAATCACACTGGGTACGGTCCTAAGATATCTGAGAAACAGAAGTGACAGA
GCATTGGAGGMATATATTTGCTCATAGAAGCCTGGACTGACATTGTGCCA
TATCAAAGCAGTCGAAAGGAGTCCAGAAGAATGTCTAACCATTTAGGTTG
TTTGAAGATAATTTATAAATGAGATGTTACAGGATTGAATCTGGTCCATT
CCAGATGAGTTAAAAATTAAGACGTTCTTCATAAACTCACAACTGCTCAG
GGCATCCTGCTGGAATTTACGTAAAATATATAAAGATATATGTAGGTGTA
TATAAATACATAGACCTGAGCTTTTAATCTCCTTGAAATGATTTTTTTAA
AAGAATTAAATCAATATAATCAAATTTGAATTCATTTATGCAAACAAACG
TACCCACAACTATATACATACATAACTGTTAGTAAATATATTTAAATAAA
TTTTAAATAATAAAATTTTTTAGTGCTTTTTTAAAGTGCAATTTCAATTC
GTTCTTTTAATAATAAACATAGGCATTATTTTTATTATTACTATTGCTCT
GTAATATTATTTAGATTCCTTTTTTTTTTAGTATTTATATTGTAATTTCA
TGGCTTATTTATGTCTCAATTTCCCAAATTAAAAATATACTC back to top
|
