EMLSAT00000002858, EMLSAT00000002858-698705 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000002858
Unique NameEMLSAT00000002858-698705
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s164supercontigLSalAtl2s164:4010..6393 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000002858 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000002858EMLSAG00000002858-685624Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000012700EMLSAE00000012700-721628Lepeophtheirus salmonisexon
EMLSAE00000012701EMLSAE00000012701-721629Lepeophtheirus salmonisexon
EMLSAE00000012702EMLSAE00000012702-721630Lepeophtheirus salmonisexon
EMLSAE00000012703EMLSAE00000012703-721631Lepeophtheirus salmonisexon
EMLSAE00000012704EMLSAE00000012704-721632Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto768432auto768432Lepeophtheirus salmonispolypeptide
EMLSAP00000002858EMLSAP00000002858Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000002858

>EMLSAP00000002858 ID=EMLSAP00000002858|Name=EMLSAP00000002858|organism=Lepeophtheirus salmonis|type=polypeptide|length=659bp
MDLLSVLVRCRGASAYXQANPEENSVSLESSKGSGLFLFDGVIPADQRQG
ELYEAHLEPIIRESLRNEASVTVFAYGQTGTGKTYTMGTNPGSMSDEGEE
GEEKGAIPRVVHQVLEHLKSDPMQWNKTSLQVSFFEIYNEQIFDLLMGER
VPLLLKEDQNHQFNILSLSSIPVESYQEVMQILVEGGETRSIGVTGXNRA
SSRSHAIFTLSIKCENAFFKINMVDLAGSECLKRTHATGQTLIEGLNINK
SLLALGNVIESLCSKKAHIPFRDSVLTKILRECLQSSACYTVMIACVSHK
EKDITDTANTLRYAYRAKRIKKQSISLKKKYVSGTPYKQNSRMWDSTIKS
YYPFKTPQNSRLVNDHRSNWLSSTTIKAYPHSCLEEPPDNYIPEISNISL
SSTMTSNTGFDPIFRQYNEECENTIVRHIQPLIQEIKDLRQQLGTHQKRK
SKLRSPNILGIESSPEYDITLKAPSRNSRRTSRSVLKDVTNDIHVQKENV
LLMSMMEKELGINPSSPILFENRKTRRQAIINDKYMEETLKNVRKSLSDK
KYESSRRRSVXLQEKNLKRNSEIQHPMNVAENWSVQSQESHNENVLKILN
SGNMRVLQALPAIGPKSAMVIHMYRNLNGSLESIESLKTIKGLSKSFYIK
FITQNQIVL
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mRNA from alignment at LSalAtl2s164:4010..6393-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000002858-698705 ID=EMLSAT00000002858-698705|Name=EMLSAT00000002858|organism=Lepeophtheirus salmonis|type=mRNA|length=2384bp|location=Sequence derived from alignment at LSalAtl2s164:4010..6393- (Lepeophtheirus salmonis)
TTTGTTCTTTGGAGAGAAAAACCAAAAGAAAGGGATTAATCCTCTGCTCA
ATGGATCTTCTCTCTGTGCTTGTTCGTTGTCGTGGAGCCTCTGCCTATCM
CCAAGCGAATCCCGAGGAGAATAGTGTGTCACTCGAGTCCAGCAAAGGTT
CCGGACTCTTTTTATTTGATGGAGTGATTCCAGCGGATCAAAGACAAGGG
GAACTCTATGAAGCTCACCTTGAGCCTATCATTAGAGAATCTCTTCGAAA
TGAAGCATCCGTGACTGTGTTTGCGTATGGACAAACCGGAACAGGGAAGA
CGTACACGATGGGCACGAATCCCGGCGTAAGGAGTAGAAATGGTTGTTGA
GCGGACCTCCTCTCATGTTGTTTGAATTCCTTTGCAGAGTATGAGTGACG
AGGGCGAGGAGGGTGAGGAGAAGGGCGCCATTCCCAGAGTCGTGCATCAG
GTCTTGGAGCATCTCAAGTCGGATCCAATGCAGTGGAACAAGACCTCCCT
CCAAGTGTCTTTTTTCGAGATTTACAACGAGCAGATCTTCGATCTCCTCA
TGGGCGAACGAGTGCCGCTCCTTTTGAAGGAAGACCAAAATCATCAATTC
AACATTCTGTCTCTCAGCTCCATTCCCGTTGAATCCTATCAAGAGGTGAT
GCAGATCCTTGTGGAAGGAGGAGAAACACGGTCCATTGGAGTTACGGGGM
CCAACCGCGCTTCGTCTCGCTCTCATGCCATTTTTACGTTAAGTATAAAA
TGTGAGAATGCCTTCTTTAAAATCAATATGGTGGATTTAGCCGGATCAGA
ATGTCTGAAGCGAACGCATGCTACAGGACAAACACTCATTGAAGGACTCA
ATATCAACAAATCGCTTCTTGCTCTGGGAAATGTGATTGAATCTCTTTGT
TCGAAAAAAGCGCATATACCGTTCAGAGACTCTGTTTTGACCAAAATTCT
TAGAGGTAGTTACTTCTATCAATTCAGGCTGGGCTAGATTTTGATTTTTG
AATTTTTTACTTTATTTTACAGAATGTCTGCAGTCTTCGGCCTGTTATAC
TGTTATGATAGCATGCGTAAGTCATAAAGAAAAAGATATAACAGATACTG
CTAATACCCTTCGTTATGCCTACAGGGCAAAAAGAATAAAAAAACAATCC
ATTTCGTTAAAAAAGAAATATGTTTCTGGTACACCTTATAAACAAAATTC
AAGGATGTGGGACTCCACAATAAAGTCCTACTACCCCTTTAAAACCCCGC
AAAATAGTAGATTGGTGAATGATCATCGTTCTAATTGGCTATCTTCGACT
ACAATTAAAGCCTATCCGCATAGTTGTCTTGAAGAACCGCCAGATAATTA
TATTCCTGAAATATCAAATATATCTCTAAGTTCGACTATGACTTCAAATA
CTGGATTTGATCCCATATTCCGACAGTATAATGAAGAATGTGAAAATACT
ATAGTTCGTCATATACAGCCCTTAATTCAGGAGATAAAAGACTTGCGTCA
GCAATTAGGAACTCACCAGAAAAGAAAAAGCAAATTAAGAAGTCCTAATA
TTTTGGGAATTGAATCTTCTCCAGAATATGACATTACATTGAAAGCTCCA
AGTAGGAATTCCCGAAGAACTAGTAGATCTGTATTAAAAGATGTCACTAA
TGACATTCACGTACAGGTATGATTAAATAAAGATATTTTTAATTGACCGA
GAATGTTTGCAAATTATTTCAAACATTTATCATTTTATTGAGGCTTAAGT
AAGAAGTAAAAGAAAAAAATAACTTTGTTTCCATTATTGTAGAAGGAAAA
TGTGTTGCTTATGTCCATGATGGAGAAAGAATTAGGGATTAATCCCTCGA
GTCCTATTTTATTTGAAAATAGAAAAACACGACGACAAGCTATAATAAAC
GATAAATATATGGAGGAAACTCTTAAAAACGTTCGTAAGTCCTTGTCTGA
TAAAAAATATGAGTCTAGTAGAAGAAGAAGTGTGKGTCTTCAGGAAAAAA
ATTTGAAAAGGAACAGTGAAATCCAGCATCCCATGAATGTAGCTGAAAAT
TGGAGCGTTCAGTCTCAAGAAAGTCATAACGAAAATGTATTAAAAATTTT
GAATTCAGGCAATATGAGAGTACTCCAGGCTTTGCCAGCTATTGGTCCTA
AGTCAGCTATGGTTATTCATATGTATAGGTAAGTGATAGTATCAGACCAT
TTATATAAGAGANNNNNNNNNNTAATGTTATGGGGTGGTGCTCCCATGTT
TGCTAATTTTTGTTTCTTTTTTTGCTTTCAGGAATTTGAATGGTTCATTA
GAGAGTATAGAAAGTTTAAAAACTATTAAGGGTTTATCTAAATCCTTTTA
TATTAAATTCATAACTCAAAATCAAATCGTTCTT
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