EMLSAT00000002881, EMLSAT00000002881-698728 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000002881
Unique NameEMLSAT00000002881-698728
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments
Table of all RNA interference experiments conducted using this feature, grouped by Phenotype CV: -Missing-
Gallery Image Title Gene or target symbol Sex/Stage Phenotype Datesort descending
AF F239 (F233+F234) EMLSAG00000010949, EMLSAG00000002881 female
  1. Adult
  2. Adult
 -Missing-
-Missing- 		14.12.2015 - 11:09
25.01.2016 - 10:12
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1669supercontigLSalAtl2s1669:55943..59066 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000002881 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000002881EMLSAG00000002881-685647Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000012780EMLSAE00000012780-721708Lepeophtheirus salmonisexon
EMLSAE00000012781EMLSAE00000012781-721709Lepeophtheirus salmonisexon
EMLSAE00000012782EMLSAE00000012782-721710Lepeophtheirus salmonisexon
EMLSAE00000012783EMLSAE00000012783-721711Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto770853auto770853Lepeophtheirus salmonispolypeptide
EMLSAP00000002881EMLSAP00000002881Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000002881

>EMLSAP00000002881 ID=EMLSAP00000002881|Name=EMLSAP00000002881|organism=Lepeophtheirus salmonis|type=polypeptide|length=414bp
MKSLLVILLGTCLALCSSDNIDVKSGNIPLKIQGRSTEQCGCGYTRYGTS
ACDGSSSRIIGGRNAKDQEXPWQALIKICRDGKCGMCGGTLINFRYVLTA
AHCLQDKGVVTPINGLTVTLGTQSQTNSNAYTRSYSVDSIIIHGEYTEST
VRNDIALLKLSSLVEVNDGTYPACIPTDENKKYVDQLVVVSGWGRYSLSS
ENLSPLLKRTGLKVLSNSHQYCINGAGLNQTPVDSKMCAYESGTDSCAGD
SGGPLILPEDGRCTIVGIVSYGVGCANAFHAGVYTRAYVSLLTIIHKTIF
DFFPLLVNDIQSSCTKGICYAFDKNINLCKSFNAPGNQGLNCPYSNQCDL
REVLINVYENPSLPKIHNLNIAGIPLQCNTKTGDCCDTRNPNNKLCDELN
KVVGSNMFSRKGKA
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mRNA from alignment at LSalAtl2s1669:55943..59066+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000002881-698728 ID=EMLSAT00000002881-698728|Name=EMLSAT00000002881|organism=Lepeophtheirus salmonis|type=mRNA|length=3124bp|location=Sequence derived from alignment at LSalAtl2s1669:55943..59066+ (Lepeophtheirus salmonis)
TAGTGAATAAGAGAGAATCACTTGATTTCAAGCTCTTCAAAGATGAAGTC
GTTATTAGTCATTCTTCTTGGAACATGTTTAGCCCTATGTTCGTCTGATA
ATATTGATGTTAAATCTGGAAATATCCCACTTAAAATACAAGGACGATCC
ACAGAGCAATGCGGTAAGAACTTAATCTATGTAAATCATAACTCTGTTGT
CTATGTACATAATATTATATTAGGCTGTGGGTATACCCGATATGGGACGT
CTGCTTGTGATGGATCCTCCTCCAGAATCATTGGAGGNAGGAATGCCAAG
GATCAAGAGMATCCCTGGCAGGCATTAATTAAAATATGTAGAGATGGAAA
ATGCGGAATGTGTGGTGGTACCCTCATTAACTTTCGCTATGTCCTCACTG
CTGCTCATTGCCTCCAGGATAAGGGCGTTGTTACACCCATAAATGGCCTA
ACAGTCACATTAGGAACCCAATCTCAAACAAATAGTAATGCATACACTAG
ATCATATAGTGTTGATTCAATTATAATTCACGGTGAATATACTGAATCCA
CGGTGAGGAATGATATTGCTCTGTTAAAATTATCTTCATTGGTCGAGGTG
AATGATGGAACGTATCCAGCATGTATACCTACAGATGAAAATAAAAAATA
TGTGGATCAATTAGTTGTTGTCTCAGGATGGGGAAGGTATTCTCTTTCTA
GCGAAAATTTAAGCCCTCTATTGAAAAGAACAGGCCTTAAAGTCCTTAGC
AACTCTCATCAATATTGTATCAATGGAGCAGGATTAAATCAAACCCCAGT
CGACTCAAAAATGTGTGCTTATGAATCAGGGACGGACTCATGTGCTGGTG
ATAGTGGAGGCCCTCTTATTCTTCCCGAAGATGGACGATGCACCATTGTA
GGMATTGTTTCCTACGGAGTGGGTTGTGCTAACGCCTTTCACGCTGGAGT
ATATACTAGGGTAACGAGCTTCTTGTTTTGGATTAAGTATTTGTCAAAAG
TAAGTTAAACTGCTCTCTAATAGTATATGAATAGAATATTTAGTAGTGTT
GGATCCATCCAAGGACTGCAATCCTAATCTGTCTTTTTCTCATTTGTCCG
GGTTTTTTTTCAGCATTAATCAGTCCTAAGGAACGATAAGTCGGTCCTTC
ATTAGTCCTACACTCCTAGCTATCTTTTTTTAGTTTCTTCACTCCTAACT
AAGATTGAAGGAAACAAAACCAAGAAAAGAATTAATGATAGCTAGAACGT
ACATGTAATACAGGAAGTAATATACGTTTAGACCTCCTACTTTAAATTTA
TGGTATTTCGTCTTTAAAAGAGGTTATGATAAAACTTCAACAGCTGAAAT
GATGTAGTTTGTAACTACGTCATTTGAGCTCTTGTAGATACCATAAAAGA
CCAATAAGGATCGTTCCTAGGACTGACAAAATTATTCAAAGCCGAACTGA
TAGGACTGCAGTCTTTTTAGCTTTTTTAGAACGATTTAACACTAATATTT
AATCATTAAAATATTTTATTTATCAAAGGATGGTGGATGTATGGAAAATA
AATCCCCTAGGAAATGTGATTTATCAAGTACAAATCTACAATCTCTGACC
GGAAATTACAGGCGTATGTTTCTTTATTAACCATAATTCATAAGACAATC
TTTGATTTTTTTCCCCTCCTAGTAAATGACATTCAATCAAGTTGCACCAA
GGGAATTTGCTATGCCTTTGATAAGAACATAAATCTCTGTAAAAGTTTCA
ATGCACCTGGCAATCAGGGTCTAAATTGTCCATACAGTAATCAATGTGAT
CTTCGTGAAGTTCTTATTAATGTCTACGAAAATCCAAGTCTCCCCAAAAT
CCACAACTTAAACAGTAACAAAAATATCTTAAAACTATTTTTAACCTGAA
TAATATATTAATTCATCAATTTTGAATTAGTTGCTGGAATCCCTCTTCAA
TGCAATACGAAAACAGGAGACTGTTGTGACACAAGAAACCCCAACAATAA
ATTATGTGATGAATTGAATAAAGTTGTTGGAAGTAATATGTTTTCGAGAA
AGGGCAAGGCCTAATCTCCTACTGATTTTATTTTCAATAATTTTTGCAAT
AAAGATTATCAAAATCTATTACTAATTCAAAATGTAATTTACTTTTCAAA
CATGGGGAAAATATTGTTTCATCATTCAGCCATTAATTAATTATACACAA
AAAAATCTTTGCGAGTTCGTTATTTAGAAACGTTTAATCGTAAAAATTGA
TATTATCTTTAATATACATCTACGTATATGGTTTATATTAGTAAAAGAAA
GTTTATCTGTATGTGTAAAAAACCGTGCATACGAGGCTGTGTTCTTGCTT
GCAATCCCAAGTGTCCTGCAAAAGGTTTGGTTTTGTTACACGGTAAACAC
TCTCTAGGGAAGTTTCGGACGTCTGCTCGCAAATTAGTCCAAGTATAAAA
AAGTGAAACCCTCCTTAACGTTTCTTTGAATTATGATGTTATTTATACTT
CTAGAAAGAATGTCTGCAGTATGATTTAACTTTCCAGCAATGTGTTTGAT
ATCACAATTGAATTCTACTATGAATTGTACGGAACTGTCTTGGTGTCCAA
GAGGGATTGCGAATATCAATCGCAGTAACTAAAGGTTTCTGGTTCGTGAA
AACTTAAAAAACTTGTCCATCCAAAGCCCATACAAAATGTTTGATGTTTT
TCTGAACACCTAACCATTCCCTATCAAACGTAGAATATTTATATTGTGTC
GTTGAAAGAGCCCGAGACCAAAAAGCTAGAGGTTGCCAGTGCCCGTTCAA
CTTTTGCTCGAGAACAGCTCTCATCTCTGTATTAGATGCATCAGTTGTCA
GGGCTAAAGGCAATGAACTATCTTTGAATGCAAGCAGAGTACTTTTAGAC
AAAATATTCTTAATACATGTTCTGTATTCCAATTAAACTTTACATTCTTC
TTTAACAGGGGGTACAAATGAACTGTCCTTTGAAACAATCTTTTGATGAA
CTGAGATTAATATTGTGCCATGCCCAAAAATCTATGCAGTTCATCTTTTT
ATTTTGGAGTTGGTACTTTTTGGAATGCCTTTACCTTACATTCTAGAGCT
AATTTTTTTTTTTTTTTTTAGTAT
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