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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s170 | supercontig | LSalAtl2s170:1064343..1070272 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000002972 >EMLSAP00000002972 ID=EMLSAP00000002972|Name=EMLSAP00000002972|organism=Lepeophtheirus salmonis|type=polypeptide|length=463bp
MNESIPHMSHLVSIAHGSHKFGSELLLQTTTSEQNAVFSSYSISSVISMA
XLGARGNTLQQIKEALHLPEDMELLKSAYSDITSVTKSDDNITLEVANSV
FPSKRLELREEYLSDVKKHFQSEIQSLDFNQAEEARKIMNDWVLQQTNGK
VKELFAPGSINSDTVNVLVNAIYFKGDWLAKFDPINTTERDFFVSSEKTV
KVPTMFASDIKYASTYNEDLKXTIAALPYKGERITMYLLVPEERFGLGEL
EQKXATDAFNPSTLDKLTHPSKNPIYLPKFKLESFHDLGDACKSLGLKDM
FDEKSDFSXNEEGXEAAAASGMXMMMRXAMIPQPLVIDHPFIFMIKDKST
GLRQSSTSLNPPHESPEIPIVNNDVNETSSNDSTSNEECEPLSDNNMGPC
IFSDESSEDMELTNRIEKYSLEACRARYEKLALVDKCICTICCVRLGSQR
LLSNHNFFYHSQK back to topmRNA from alignment at LSalAtl2s170:1064343..1070272+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000002972-698819 ID=EMLSAT00000002972-698819|Name=EMLSAT00000002972|organism=Lepeophtheirus salmonis|type=mRNA|length=5930bp|location=Sequence derived from alignment at LSalAtl2s170:1064343..1070272+ (Lepeophtheirus salmonis)
TTGACGAAAATGAATGAAAGCATCCCACACATGTCACACTTGGTCTCTAT
TGCACACGGGTCTCACAAATTCGGAAGTGAACTCCTTCTTCAAACTACAA
CTTCGGAACAAAATGCCGTATTTTCAAGCTACAGTATCTCCAGTGTTATT
TCCATGGCTGSTCTTGGAGCAAGGGGAAACACACTTCAACAAATCAAGGA
GGCTCTTCATCTTCCAGAAGATATGGAATTGCTAAAGTCTGCCTACTCAG
ACATCACATCTGTGACAAAGTCGGATGATAACATTACTTTGGAGGTTGCA
AATTCTGTTTTTCCGTCCAAGAGGTTGGAACTACGAGAAGAGTATTTGAG
TGATGTGAAGAAACATTTTCAATCAGAGATTCAATCCTTAGACTTTAATC
AAGCTGAAGAAGCAAGGAAAATCATGAATGATTGGGTTTTACAACAAACC
AATGGAAAGGTCAAAGAATTATTCGCCCCTGGTAGCATTAACAGCGATAC
TGTGAATGTTTTGGTAAATGCCATTTATTTCAAGGGGGATTGGTTGGCAA
AATTTGATCCCATAAATACAACAGAGAGAGATTTCTTTGTATCTTCAGAG
AAAACTGTCAAAGTCCCAACCATGTTTGCGTCCGACATCAAATACGCTTC
AACATATAATGAAGATCTAAAATGRACGATTGCTGCTTTGCCATATAAAG
GAGAACGGATCACCATGTATCTTCTAGTCCCAGAAGAAAGATTCGGACTT
GGGGAGTTGGAACAAAAGMTAGCAACGGATGCTTTCAATCCCTCAACCCT
TGATAAATTAACTCACCCAAGTAAAAATCCAATTTATTTGCCAAAGTTTA
AGTTGGAATCATTTCATGATCTCGGAGATGCTTGCAAGTCCCTTGGATTG
AAGGATATGTTTGATGAAAAGTCTGACTTTTCAGGTATGGCTGGAGGTCC
AGGAGAACTNATAMGKTTYTWAARTTGTAYAAAAARMCMTAATTGAAGKT
AATGAAGAGGGAAGKGAGGCGGCTGCMGCTTCTGGRATGGKTATGATGAT
GAGGKGKGCTATGATACCTCAGCCTCTTGTCATTGATCATCCCTTTATTT
TCATGATCAAGGACAAATCCACTGGACTTGTATTATTTTCTGGAAAAGTC
GTGGATCCCTCAAGATCTTAATTGTTGATATATGTATATAATGTATTTTC
ATTTTTTAATACCCTTACCAAATTTATTGGTTACATTAATTTGTAATACA
CATTCAATGACTGATTTAAGAAACAAAATTTTGTCATTAAAAATATTTCT
TTATATTGATTTATTTTGATGTATAAAAAGCTGAGGTTTACTGAATCCAT
TGTTGATTGTTAACAAGAAAATTTTGGAAGCTGTCGCAAATCAACTTTGC
TTAAAACACAACTTTTAAACGTCGATTTTGAACGGTTGTCGTCCTTAATT
GATTAAAAAAATTGTACAAATTAAGATATTTTCAGTAACTATTACTTTAA
TTTAATCATAATACCTGTATTTATCATTGGCATTTGATGGGGGTTGCGCA
AGTTTTTATTAGAAATTTGTGTGATATATATAGAGTGGTACATTAAAATC
TGAATTTGAAACCTCCACAATAGTTTATTAAATAACAATAGAATTTCAAA
ACATTAATACCAATCATATGAAGATGTGTATCTGAGCTCTCTGAATAATT
AATCCAGCCGTCCTTAGNAAATCCTAATTTTTTCCCCCCTCCAGTACTTG
GCGCACGGATACAAAATAGTTTGCACTATACAATTGACGGTACCAACTAA
ATCGAGCTTCGATAAAATCGTTTTGCACCTCTGGAAGGAATATTCGAAGC
CACAATCTTGCAAGTTTTGCAGTAACATCTGTAGTTTGGTTCACAGTAGT
GAAAGTATCTTTTGTGAAGCTCATTTTGTGAGAGGTAGATTCACACTTCC
ATGAATTTAACCACACATGGAAATCTAGAAGAAATTGAATATTTTCGTGA
TTTAATGACAGAGGCTCCCTCGATGAGTCTCTTTCTCCGTCCTGCGGAAG
GCGTTTTACAATTTAGAATATTCCAGTATTTTATAATGATGGACAAAAAA
ATTGCAGTTATTTTCCAATTAAGATTTTGATTAGAATAATAATTTAGGCC
GCAATTGTGCTTTCATGAAAAATATTATCTGCTAATAGTACATTGGTTTT
TTCAATAGACGTGGGATACAAAGATTTTGTCGTGAGCTTATAAGCAATTT
TAATCATCTTGTCCTTCTCCATTTCAAAAATATCAATAATATTCTGGAAA
TTCGGTTTTGACAGCTGAACATCCATAAGGTTAGGGCACATTAAAAAAAT
GTTTCTTTGGAAAAAATTATAAATATTTTTTTAAGTTCTGTGTACTATTA
AAAAGGAGGAATAGTTCCTGTTCTGGCCTTGCAGGATTTGGGACACTAAC
CTTCCAGGATACTCCACACATTGCCAAGAAACATTTTCGATTAGGAATTG
CATTGCCCATGGAGATTGCTACGACGTCAAATCCGATTTTAAAGAGTTCA
GTATTAATTTGCAATAGTAGATCATGCAGTGCAGACAAATTGAGGCATAC
AATAGGATAATCGCAACGGTGTCCTGATACTTTGAGCACAAAGACTTGAT
CATGAACACAAGGAGTGTCTTTATTATGCTTCCTCCTTCTTGTCCAGTCA
TCCTTCCTCCGAAATATTCCACTCTTTGGGCTGTATATACTTCATCAACA
ATTAAAATAACCTTCTTTTGTTGGGTGACAATAACTTGTGTCTTACGGAC
AAGTAGTCAACGGACGAAGATGAAAAACCAACATTCATGGTAAATGCAGA
TGACAATTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCCTG
AGATAATTGACGATATAAAGCTGGGCTGGTGTTATGACATAACAGAGAAG
TAGCTAATAATACAGGAAAGTATCGCTTCTGTTTCGGTGTAGAGTTTATT
AAAGCAAGCTGTTCTCATATGAAAATCAACTTTTTCCGTTAGTGAGAGTC
TATATAATTTTCAACGATACTCTCAACATTAATTAATCATATATTTCATT
GGAGGAAAAGGAATACTCTTCATATGAGCAAAGATGTTCTGGAGAAGGCT
TACCGAGGTGATCTTTCTATTCGTTGTGAGGTGATTCACGCAGCTCCGAT
CTAGGTTGACGTTCTTGTGATATAAATTAATTGTCAAATCACTATTTATC
ATCACTGAGAATTCGATTTCGACAAAATCAGAACACAGTTCAGATAGACA
GTAAAACTGAATTGAATCCTCCATCCTCCTCCAATGAACATTCGTCTGGA
ATTTTCCATCTCCACACTTAAAGACACAAATCACTAAAGTCAATAACAAA
ATCTTTAAGGAATAATGATCACGATAGNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACGGRTGATAAG
TATTYGAAAGATTGGGAAAAATACTAGGCGACTGTTTCAAATAACGTTTT
TGGAGCTTATTATCTTCAACTCTATAAGAAGATCCATGTTTCCTCGTGTG
GTCTGCGCTCTCTGATACAATGTCTTTTATATTATGTAGATTCAAGTCCA
TTATTATTTAGATCCAAAGGATGCTTTATAATTATATTGGAAAGTAATTT
ATTTAATTCCGAGTCAAGTAAAGTATGAAGTATCACCGAGTTTATTTTGA
TTTTTATCCCGTTCATGACGTCATCTGCCTAGTTAGGAGTGTTGACTGAA
ATGCTCCGTCCTTATATTTATGTATAGGCAGGATACTAAGTCTAAACTTG
TATTTCTATGAACCTTTGACATAGCCTCATATAGGTAGTTCTATAGTAGT
AACTTGACTAGTAAGTATTTAGTAGCATTTGTTATTCAAAGTACGTATTT
TTCGCCCCCATTGACAGAACACTTAATCCGAGATGGGATCCCTGGAATAC
CTTTGTCTTCAATGGAATGAGTATGAGAACAATTTCAAACAAGGTCTTTC
CGAATTACGAAAAAATGAGGAACTCTTTGATGTGACACTTACATCTGGAT
CTAAGCAAATCAAGGCTCACAAAGTCATTCTCAGTGCATGCTCCCCTGTA
TTTCGCTCCATGATTGGATCTGCTCCCTTCCAGATGCATCCTCTAATTTA
TTTGAGAGGGATAAACTTTAATCATTTGGAGTTGCTTATTTCCTTTATGT
ATCATGGACAAGTGAGAGTGCTCCAAGACGAACTAGAGGATTTCATTTCC
ATAGCGAAAGAACTTAAAATAAACGGCCTTTCAAATGATTCTCCACTTAT
GAAAAAGAATCAATCTCAGCCCACCTCCAGTGCTTCTACTACGTGCTCTT
CTACTTCTCTAAATCTACCTTATGAGTCACCCGAGATCCCTATTGTAAAT
AATGATGTAAACGAAACTTCCTCCAATGATTCAACTAGTAACGAAAAGAA
TGTGAACCCCTGAATGATAACGATATTGGTCCATGTTATATTAATGATGA
ATCATCTAAAGATATGGAATTAACTGATCGTAGTAAGGAGAACTTATCGG
ATGTTTATAGTCGCAGGGTTTGTAGTGTTGTAGTTTTCATATAATTTAAT
GTACTTATATATATTAACTGGGGATCTTCTTTTTGAGAATCTACGAGAGA
GAATAAAATCAGTTTTATACCAAGACTTGATACCCCTGAAATAATATATC
TAAATAGTAAAAAATGATTTTCTGTAGATGCACTTTTCTAATCTAGTTTA
AGGATCCTCAAGCAGGTCTTTAACGCGGTCGAATTGCGACAAAACGAAAT
TAAAATAGTCTATAGATTATTATGTTTTTCTTTGATTCATAGAATTTCCT
TTCTTAGCGACAGTCTTCTACTTCTCTAAATCCACCTCATGAGTCACCCG
AGATCCCTATTGTAAATAATGATGTAAACGAAACTTCCTCCAATGATTCA
ACTAGTAACGAAGAATGTGAACCCCTGAGTGATAACAATATGGGTCCATG
TATTTTTAGTGATGAATCATCTGAAGATATGGAATTAACTAATCGTATTG
AGAAGTACTCATTGGAAGCTTGCAGAGCCAGGGTTTGTAGTGTTGGAGTT
TTCATATAATTTAATATACTTATATATATTAACTGGGGATCTTCTTTTTG
AGAATCTACGAGAGAGAATAAAATCAGTTGTATACCAAGACTTAATACCC
CTGAAATAATATATCTAAATAGTAAAAAATGATTTTCTGTAGATGCACTT
TTCTAATCTAGTTTAAGGATCCTCAAGCAGGTCTTTAACGCGGTCGAATT
GCGACAAAACGAAATTAAAATAGTCTATAGATTATTATATTTTTCTTTGA
TTCATAGAATTTCCTTTCTTAGCGACAGTATTCTACTTTGGCATGGAAAT
GAAATTCTTTGGAATCTTTTCCCGGAATCTTGAAGAATAAATGCTATCAG
TTATAGCGTGTTGTTTAAGGGTAAAAGAATACGTTGTGCCCAGGTTGAGT
GAAAGAATTTTTTTTTATTCTCTCTCGTAGATCCTAAAGAAGAAGATATA
CGGTTCATATATATAAGCACACCAATCGATGTTAAAGAAACTAAAGCCTT
GAGTAACTGTATTTTTTTATTTTTTTTTCGCATTCAGTACGAAAAATTAG
CTTTAGTTGATAAATGCATTTGTACCATTTGTTGTGTGAGATTAGGGAGT
CAACGCTTGCTATCCAATCACAACTTTTTTTATCATTCGCAGAAATAAAA
CCTGGATTATTTGGAATGAAAGAAACATTTATAATTGGCCTAATTATACT
CAATGAATTTAGAGAATATTCTGTTAATTGCAGACAATTTTTGTCTAAAG
AAAAGTTATAAAATATAAAATACGTTTAGA back to top
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