EMLSAT00000003068, EMLSAT00000003068-698915 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003068
Unique NameEMLSAT00000003068-698915
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s173supercontigLSalAtl2s173:1220592..1223012 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003068 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003068EMLSAG00000003068-685834Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000013454EMLSAE00000013454-722382Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780538auto780538Lepeophtheirus salmonispolypeptide
EMLSAP00000003068EMLSAP00000003068Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003068

>EMLSAP00000003068 ID=EMLSAP00000003068|Name=EMLSAP00000003068|organism=Lepeophtheirus salmonis|type=polypeptide|length=806bp
MSFFKLLIFLVIVNLVDSEGNVTETSQTLADPGFHPHPLADGHGGNHTST
GGQDHQNHHKSVHLVSWRWEEYGVIIIFVIMIILGSLFKILFEQTFFHRL
HIPESCLLILTGIILGFIGNYVIPNAFPDFTIDLFFKVLLPPIILDSAYS
LYDRDFFSNIGSIILFAIVGTILNAFLIGLILAGTSLAGAFNRNIELVDC
LVFSSLISAVDPVAXLAIFEEIGVNLELYFIVFGESLLNDGVTVVLYNTL
IILSGPGETEGIQYLMAILSFFTVVLGGFAVGWIVGWITALSLKFRKEAT
SVEPIIVITFAYLSYIIAETLHWSGILSLIACGICQKRYAFVNISKKSYS
TVKYGIKTLSAASDSIIFLFLGQVVAVATKTNSTQLSWDFDVGFILETLL
LCLIVRYISVYGLSYLVNKTRVKKISLKEQFIVAYGGLRGAVGFSLAILI
PNSNPHRLMFITTTIMVIFFTVFLQGGTIKLLVNKLGIAKHIDQEALIST
ELNLQMIEHTMAGINSITYQVSQSNIIETLSRFDERYIKRFLVRDMAFHL
LRAKFEKIALDEHFARLYGPNVLYKNCDNYVVESESDMSTLMEEDNENDG
AEKVTYQELDIKRQPTQDRRAFTEPTTPTALSPENKAADHHNLLKGIRAN
NFQHYRMFNDEHQTDLHCVAAQLRRQSLTARRISECLEHPSTPLKFVLTD
LSLEEDEDEDSSGDKRKASFTGSAEEDVLEIGRNRVRRHSTVAIKEQQRS
NKRRYSLAPLTINNPRLRHLSHPSSPYVLPRRRSTLDTEAIKNIFRENNF
GNKSPK
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mRNA from alignment at LSalAtl2s173:1220592..1223012-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003068-698915 ID=EMLSAT00000003068-698915|Name=EMLSAT00000003068|organism=Lepeophtheirus salmonis|type=mRNA|length=2421bp|location=Sequence derived from alignment at LSalAtl2s173:1220592..1223012- (Lepeophtheirus salmonis)
ATGAGTTTCTTCAAGCTATTGATATTCCTAGTCATTGTGAACTTAGTGGA CAGTGAAGGAAATGTGACAGAGACCTCTCAAACACTTGCAGATCCAGGAT TTCATCCTCATCCTCTTGCAGACGGCCATGGGGGCAATCATACTTCCACT GGTGGTCAAGACCATCAGAATCATCATAAATCTGTACATCTCGTATCCTG GAGATGGGAAGAATATGGAGTCATCATCATCTTTGTGATCATGATCATCC TGGGATCTCTTTTCAAGATCCTCTTTGAACAAACTTTTTTCCATCGTCTT CATATTCCAGAGTCTTGCCTTCTCATACTTACGGGTATAATCCTGGGATT TATCGGGAATTATGTTATTCCGAATGCCTTCCCTGACTTCACCATCGATC TCTTCTTCAAAGTKCTCCTTCCACCCATCATCCTCGACTCTGCCTATTCT CTCTACGATAGAGACTTTTTTTCAAATATTGGATCCATCATTCTTTTCGC AATCGTGGGCACGATTTTGAATGCTTTTCTTATTGGTCTCATCCTTGCTG GGACCAGTCTAGCAGGGGCTTTCAATAGAAACATCGAACTCGTGGATTGC TTAGTATTTTCTTCTCTCATCTCTGCCGTAGATCCTGTGGCTGMTCTAGC TATATTTGAAGAAATAGGAGTTAATTTGGAACTCTACTTTATTGTCTTTG GAGAGTCCCTCCTTAATGACGGAGTCACCGTTGTCCTGTACAATACCCTC ATCATTCTCTCTGGTCCCGGGGAAACGGAAGGGATCCAGTATCTTATGGC CATTTTAAGTTTCTTTACCGTTGTACTTGGTGGTTTTGCTGTTGGATGGA TAGTTGGATGGATCACAGCCCTGTCTCTTAAATTCAGAAAGGAAGCAACA TCTGTTGAGCCCATCATCGTCATTACTTTTGCCTATCTGTCATACATCAT TGCTGAGACTCTTCATTGGTCGGGGATACTTTCACTCATTGCTTGTGGTA TTTGTCAAAAGCGCTATGCCTTCGTCAATATATCCAAAAAGTCATACTCC ACAGTCAAATATGGAATTAAAACCCTCAGCGCTGCCTCTGATTCCATTAT TTTCTTATTTTTGGGCCAAGTCGTCGCCGTTGCCACGAAAACAAATTCAA CACAACTGTCATGGGACTTTGATGTGGGATTTATCCTGGAAACTCTTTTG CTCTGCCTCATTGTTCGCTACATATCCGTCTATGGTCTGAGCTATCTTGT GAACAAGACCCGTGTCAAAAAGATATCCTTGAAGGAACAGTTTATTGTGG CATATGGGGGTCTGAGGGGTGCGGTTGGATTTTCTCTAGCTATTCTCATT CCAAATAGCAATCCACATCGCCTCATGTTTATAACCACAACGATTATGGT CATTTTCTTCACTGTGTTCCTTCAGGGTGGAACAATTAAGCTCCTTGTGA ATAAACTTGGAATTGCCAAGCATATTGATCAAGAAGCTCTCATATCTACC GAGTTGAATCTGCAAATGATTGAGCATACGATGGCAGGGATCAATAGTAT TACATATCAGGTCTCTCAGTCGAATATTATCGAAACTCTGAGTCGTTTTG ATGAGAGATACATTAAACGTTTCCTCGTTCGAGACATGGCTTTCCATCTT CTAAGAGCAAAATTTGAGAAAATTGCTTTAGACGAACATTTTGCACGTCT CTATGGTCCTAATGTTCTTTATAAGAACTGTGACAACTATGTTGTGGAGA GTGAGTCCGACATGAGTACTCTAATGGAAGAAGATAATGAAAACGACGGA GCAGAGAAGGTTACTTATCAAGAACTTGATATTAAAAGACAACCCACTCA GGATCGTCGGGCCTTTACTGAGCCAACGACTCCCACTGCTCTTAGTCCGG AGAACAAAGCTGCTGATCATCACAATTTGCTCAAAGGGATCCGTGCAAAT AACTTTCAACATTATCGCATGTTCAACGATGAACATCAAACGGATCTTCA CTGTGTTGCAGCCCAACTCCGCCGTCAATCCCTTACTGCCAGACGTATAT CTGAGTGTCTGGAGCATCCCTCTACCCCTCTCAAATTTGTGCTCACAGAC TTGAGCCTCGAAGAGGATGAGGATGAAGACTCCAGTGGGGATAAACGTAA AGCTTCCTTTACTGGGAGTGCAGAAGAGGACGTATTAGAGATAGGTAGAA ATAGGGTGCGTCGGCATTCTACAGTGGCCATCAAGGAGCAACAGCGATCC AATAAGCGACGCTACTCCCTAGCACCTCTCACCATCAACAACCCACGACT AAGACATTTATCACATCCTTCCTCTCCATATGTACTCCCAAGGAGGAGAT CCACTCTAGATACTGAAGCAATTAAGAACATTTTTAGGGAAAATAATTTT GGTAATAAATCACCAAAGTAG
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