EMLSAT00000003274, EMLSAT00000003274-699121 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003274
Unique NameEMLSAT00000003274-699121
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s179supercontigLSalAtl2s179:129069..132730 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003274 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003274EMLSAG00000003274-686040Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000014309EMLSAE00000014309-723237Lepeophtheirus salmonisexon
EMLSAE00000014310EMLSAE00000014310-723238Lepeophtheirus salmonisexon
EMLSAE00000014311EMLSAE00000014311-723239Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto772859auto772859Lepeophtheirus salmonispolypeptide
EMLSAP00000003274EMLSAP00000003274Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003274

>EMLSAP00000003274 ID=EMLSAP00000003274|Name=EMLSAP00000003274|organism=Lepeophtheirus salmonis|type=polypeptide|length=162bp
MNQIYFIIITLYTLLIPLIDSNDTKLPKIIEKLAITNRIEYSNGDKIKLR
CPILGPSPFKITWRKTTVCRAFNAWEVEGKVCRKAHNMKSDRNRGVSKQL
VSKAVSKDLGYRSYRMDKQHILTASMKATRLTNGKRLLNDLKSHGGRIIF
FSDKKNWTVDRS
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mRNA from alignment at LSalAtl2s179:129069..132730-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003274-699121 ID=EMLSAT00000003274-699121|Name=EMLSAT00000003274|organism=Lepeophtheirus salmonis|type=mRNA|length=3662bp|location=Sequence derived from alignment at LSalAtl2s179:129069..132730- (Lepeophtheirus salmonis)
ATGAATCAAATTTATTTCATCATTATCACACTTTATACTCTTCTCATTCC
ATTAATAGGTAAGATGATATAGAATTATGTTGGTGGTGAGTTAACACAAA
AACAATCAGGAACAAAAATCCAGACAACGAAAAATGTCTTCTTTATATTT
TTGTAGCATACAACACATTTATTCACAGACATAAAGGGGTCAATTATAAA
CTTTGTATTCAATTTTCTGTTATAAATAAAAATTGTTAAGAATATTCACT
ATAGTTTAAAGACTTAAGTGTATTTTTGAGCCTTAATTAGACTGGATATG
GCATTTCAAATAGAAACTCTCAATTTATCATTTAATTTATTCATTTTCGT
TGTGTCAACGACAGGCTTTGTATTCAATTTTCTGGTCCAATTTGAGATAC
CTTTAAACTTTAGCAATAGTTATAAGTCTTTTTTGCTTTTACCATTTATA
ATTTAGCGCCGAAATTACCTTTCTGCGCGAAATCGTCAATTTATCATTCT
TTCATTGTGTCAAATTAAATAGTTTATGTACATATTTTGGGAAATTTTAG
GCTTTGTATTCAAATTTCGGTTATGAGTCTATATGCACACAGTATTTAGC
TATAGTTTAAAGCCTTCAATGAATTTTTAAGTCTTAATTTATCCCCGATA
TCATCTTTCAAATAAAAATATTTATTGGACATAATTCGAATAATTATAGG
CTTTGTATTTAAAGTTCTTCTAAGTGTTAACATATCTAAGAGTTTAAACT
ATAGTTTGAAGCCTTCATTTCATTTATTAGACTAAATTTTATCCTGACCT
AGCCTTTTTCAATATTAATTCTACCAATTTTTAATTATTTCACTGTAAGG
ATGCATTTTTTCCTAGATTTAAACTCTTTTGTGGCACCTCTTGAAGATTC
ATCATTAAATTTTGTTTATAGAAATGGACCATAATCCGTTGAATAGAACA
AATATAATCTCCCCTCAATTTTAAGACTAATCATTCTTGGTTGCTTTTGT
GTAGACGGGCCACTAATATACTTTTGAAATTAAGTTTACTTAGTTTGTTT
TGTTGATATCAAAATTTTCAGACTCAAATGATACAAAATTACCTAAAATC
ATCGAAAAACTTGCAATCACAAATCGAATCGAGTACTCAAATGGCGATAA
AATAAAACTCCGATGTCCCATTCTTGGACCAAGCCCTTTTAAAATCACTT
GGAGAAAGGTAAGGTCTAAAAATAGGCAGCTTATTCATTGTTGAAAATAA
TTATGTATGACTATGTTTGTCGTATATGATTCGAATTCCTTATTATTTTA
ATGACGCAGTCTTACTTATCAATGAATAATAATTCACAACAACTATTTCA
AAGGGAATTAGTTATTGTTAGTAATGTCATAACAATCAAAATGATAAACA
ATTTGATCTATTTGATGATTAATTCAGTCATATCTGATTCAATTCAATCC
AATAATTGAAATTATAAGATTGTATATCCGGTAGCTAAATAATCTATTTA
TAGTGAACGCAATAATTTCAATTCCGCTTTAGAGGATTTTAGCACTATTA
CTGGTAAATTGATTTACCTTTAATTGGCACTATTAGAAAGATCAAAGTCG
GCCACTTTTAGAAATGGTTCATTTCTTTAAAATCAACGGAAAACTAAACA
TATGTTTAACTTAAAACTACACAAAGCGTTTTCCTTTGGCGGGTAGCACT
TTCCCAATAATCAGAATCCATGTCCTATTGATATTGTTGGTGTGACTCCT
TGTTTGATTATCTTGCCCACTCATCTTACACTTGGTCTTGCAGGCAATGG
ACTTGAGAGCCCTAATGAGCTTCTGAATGTTCTTCCCGTATTACCCAATA
GGCTTACAATCTGGAATTGACTTTTCCAAGCCTACCGTTGGTCCACACTT
TGATCATATTGCTGTTGGGGATCAGGGGTGCAATACTAAAAATAATAATA
AAAAATTAGTTAAATGATTTCGACGTCCATAATTTGAAAGCTAATTATTT
ACTCCTTAAGTTAATTATACTTGCAAAAGATTGGTTTTTTCATAACTAGA
GTACAACCGCAGAGCACATACAAAATTTGATCTGTCCTGGCTCAGAAGTT
GAATTGTAGTACGGCAAAAAAATAAAATATATATGTAATATATTTGGGCT
AATTGTTTATGTGCTAGATTCCATGATTCTATATTCAATACTGTTAGTGC
AAATATATATTGTTGTGGTATCGGAATTAATGTGGATTTTGTATATAGGG
CCGATTAGATCAATCATAGTCCCATTAAAACTTACCAAAAAACTTGACCC
ATTAACGGCGATAAATATTAAATAAGTTTTTAACAACAAATTACAAATAA
TCAATTTTTTAGGAAAACAAAATTCAAAAATCTATTCATAAAAATGAAAT
TTCAAATAACACAAAAACTAAACTTCCAATATGATATTTTTTTGAAATAG
GAAATCTTAAAAAAAAATTTCGCATAGTTTTGAGTAAAATTTATTCATCC
TAACCCAAAAAATTTCTAGTAATAATAAAAAAAACCTTAACTTATGGGGG
GGGGGGTTACAGGGGNCTCCTCTGGTATCTTACATGTTTGATTCAAAGCT
TACAGCCCTTATTCAACGTTGATGACTTGTTAACGGCGTAGACGGTAGTC
CTGTAGACGCCCAATTGTTTGGAGTGCGCGAATGGAAATTTTCCGATCAC
GTTTATGTGTCATTTTCTCGACTTGTACCAAAGGTAGAGAGCTCAAGTTT
GTTTTGTTTTGTAACTAATTGTTTATGCTTCAATATAAAGGAATATGAAT
TAGTTTCAATCACTCAACCTTAACTAATTATTGATTTTGTTTGTGTGAAT
ATATCAATGGACTGCCCGGTATACTGATTAACATTTTTATTGTCAATTAT
TACTTATATCTACCCCAACTTCCCCCATTGACAGTATTAGTAAATACGTT
TAATTACCCACATAAAAATTAATATAATAGCTAAGGTACTGTTAACTATT
CTCTGCCATTGGTGTACAAAGTTCCATATTGTTTTAAACTCTGCAAATCA
GAAAAATATGTCTCAATATCAGTTTAAAAAGCTTTGTAATATATCGAATA
CGGTTTTTTTGTCCTTACTCACCAATTACAGGGTGTCCACGATAAATTGT
AACTACTTTAAACTTCATTCAGATCCATAATGTGGATATTTGGGGTTAAA
TCAACCTAATATAAAAGGTTGCGTGAACAATAAACTATAACTTCCACCAC
AATTGTTTTGACAACAAACAATAGTCATCATGGAATAAGCAAGGAGAGKC
CCCATCCTCGAATTGGCTCGCATGGAACACAAGCCTCTGCTATCTACAAG
CTTCTTAATTACCCTAAGACCACGGTGTGCCGGGCGTTCAATGCCTGGGA
GGTTGAGGGGAAGGTATGTCGCAAGGCCCACAACATGAAAAGTGACCGAA
ACCGTGGAGTGAGCAAGCAGCTGGTCTCCAAGGCTGTGAGTAAGGACCTC
GGGTACAGGTCATACCGAATGGACAAACAACACATCCTCACGGCATCCAT
GAAGGCCACCAGGCTCACCAACGGTAAGCGTCTCCTCAATGACCTGAAGA
GCCATGGAGGAAGAATCATTTTCTTCTCCGACAAGAAGAACTGGACTGTC
GACAGAAGCTAA
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