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Associated RNAi Experiments
Table of all RNA interference experiments conducted using this feature, grouped by Phenotype CV: -Missing-
Gallery Image |
Title |
Gene or target symbol |
Sex/Stage |
Phenotype |
Date |
|
HCP1 |
|
unknown |
none -Missing- |
26.07.2016 - 10:07 02.08.2016 - 10:00 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
LSalAtl2s180 | supercontig | LSalAtl2s180:493171..494827 - |
Analyses
This mRNA is derived from or has results from the following analyses
Analysis Name | Date Performed |
ensembl | 2013-09-26 .965016 |
Properties
Property Name | Value |
Logic name | ensemblgenomes |
Biotype | protein_coding |
Evidence | IEA |
Cross References
External references for this mRNA
Relationships
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000003292 >EMLSAP00000003292 ID=EMLSAP00000003292|Name=EMLSAP00000003292|organism=Lepeophtheirus salmonis|type=polypeptide|length=484bp
MTSIWKKTRYILDNITLEPVVFLFGLSHGLYSITVQSLYISKVCAVNLNH SLTICDDIYQHEEIQTEVQKYVSQLQAYNFFLQGLPAVIYSLFAGPWSDI NGRKAIIVLSCFGYVFNNVIYLLNTVFFFELKAEYLLFECLQDFTGGYVA FFFACHSYITDITDDSSRTKRMAFLDGIFPIGFLMGLGLSGIIKKKLGFT YCFSLAIVTSWSSILYTIFFIKERNSSEDQVDNTDDNSTTQSANNKVKKE PIWKMFKIQHFQAGVKSTLKRREHDLKKYLLFLILIFMLELFLYGGKGSV MFLYLRKRFKWTEIDFSQFMIVFGIQGLVSQYFVIPFLSHKLKWRDGTII LIAVGGNIIAGFMFTFANVSWLVYVAGIVSFLGAAISTLLRSLISKCIES DEIGKVFSVIASGQAVIFMIASPIYSLVYKATLDFFPGLVFLVTSCLYSI VGFLAIYLYFGLKKVENSRKNAHELREEELLNRN back to topmRNA from alignment at LSalAtl2s180:493171..494827- Legend: polypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000003292-699139 ID=EMLSAT00000003292-699139|Name=EMLSAT00000003292|organism=Lepeophtheirus salmonis|type=mRNA|length=1657bp|location=Sequence derived from alignment at LSalAtl2s180:493171..494827- (Lepeophtheirus salmonis) ATGACTTCGATATGGAAGAAAACAAGATATATTCTTGATAATATTACTCT
AGAACCCGTCGTTTTTTTGTTCGGATTATCTCATGGGCTTTACTCCATCA
CTGTTCAAAGTTTATACATTTCTAAGGTTTGTGCAGTGAATCTCAACCAC
TCTCTAACCATTTGTGATGATATTTATCAACATGAGGAGATTCAAACCGA
AGGTATCTAAATATAAATCAAATCTTCATCCTTGAATTTATTTATATGTT
TATACCGACATTAATAAATTTATCCAAATTTAGTTCAAAAGTATGTATCA
CAGCTCCAGGCCTACAATTTTTTTCTTCAGGGGCTTCCAGCAGTAATATA
TTCACTTTTTGCGGGACCGTGGTCGGATATTAATGGACGAAAAGCCATTA
TAGTTTTATCTTGTTTTGGCTATGTCTTTAATAACGTCATATATTTATTG
AATACCGTCTTTTTTTTCGAACTAAAAGCAGAGTATCTCTTGTTTGAGTG
TCTACAAGTAAAGTAATAAGCCACAGTTGAAGGTGTAATGTTTATTATAC
ATGTTCATTTTATCTTTTAAGGACTTTACTGGTGGCTATGTAGCCTTTTT
TTTTGCCTGTCACTCTTATATAACTGATATAACTGATGATAGTTCAAGAA
CAAAACGAATGGCCTTTCTCGATGGAATCTTTCCAATCGGGTTCCTTATG
GGATTAGGTCTAAGTGGGATCATTAAAAAAAAGTTGGGATTTACTTACTG
CTTTTCACTAGCTATCGTTACCTCCTGGTCATCCATTCTCTACACAATAT
TCTTCATTAAAGAACGAAATAGCTCTGAAGATCAAGTTGATAACACGGAT
GATAATTCAACAACTCAGAGTGCTAATAATAAGGTTAAAAAGGAGCCGAT
CTGGAAAATGTTTAAGATTCAACACTTTCAAGCGGGGGTGAAATCAACAT
TGAAAAGGCGTGAACATGATCTAAAAAAGTACTTGCTCTTTTTGATTCTG
ATCTTTATGCTTGAGTTATTCCTCTACGGAGGGAAAGGCTCTGTAATGTT
TCTCTACCTTAGAAAAAGATTCAAGTGGACTGAAATTGACTTTAGTCAAT
TTATGATTGTTTTTGGGATTCAAGGCCTTGTATCTCAATACTTTGTCATT
CCATTTCTTAGCCATAAGCTGAAATGGAGGGATGGAACAATCATTTTAAT
AGCCGTTGGGGGAAATATCATTGCTGGATTTATGTTTACATTTGCAAATG
TGAGTTGGTTGGTCTATGTTGCCGGGATTGTATCATTTTTAGGAGCTGCT
ATTTCAACTCTTCTTCGATCCCTTATTTCAAAATGCATTGAGTCAGATGA
AATTGGAAAAGTATTTTCGGTCATTGCATCGGGTCAGGCAGTTATATTCA
TGATAGCCAGTCCAATATACTCATTGGTATATAAAGCTACGTTGGATTTC
TTTCCGGGATTGGTTTTCTTAGTGACATCTTGTTTATACTCTATAGTCGG
TAAGATTGTAAAGACATTTTTAATATATTTTAAAGGTTTACATTAATTTA
TCATAGGATTTCTTGCGATTTACTTATACTTTGGATTAAAAAAAGTCGAA
AATAGCCGGAAGAACGCACATGAACTACGAGAAGAGGAATTGCTCAATAG
GAACTAA back to top
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