EMLSAT00000003295, EMLSAT00000003295-699142 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003295
Unique NameEMLSAT00000003295-699142
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s180supercontigLSalAtl2s180:521937..523223 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003295 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003295EMLSAG00000003295-686061Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000014408EMLSAE00000014408-723336Lepeophtheirus salmonisexon
EMLSAE00000014409EMLSAE00000014409-723337Lepeophtheirus salmonisexon
EMLSAE00000014410EMLSAE00000014410-723338Lepeophtheirus salmonisexon
EMLSAE00000014411EMLSAE00000014411-723339Lepeophtheirus salmonisexon
EMLSAE00000014412EMLSAE00000014412-723340Lepeophtheirus salmonisexon
EMLSAE00000014413EMLSAE00000014413-723341Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778360auto778360Lepeophtheirus salmonispolypeptide
polypeptide-auto778362auto778362Lepeophtheirus salmonispolypeptide
EMLSAP00000003295EMLSAP00000003295Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003295

>EMLSAP00000003295 ID=EMLSAP00000003295|Name=EMLSAP00000003295|organism=Lepeophtheirus salmonis|type=polypeptide|length=288bp
MTNKNCMEKTSSKPFLLQKHVIRQIWVSGLANLLQTMQGFVIAMSSIMIP
QLLHTKDENELYLTEDQATWFASIYCFGYLSGSFIGAFQGNYFGQRISLI
IDCITATTGLLMVGFAPSFPCMCIGRLLCGHASASGTVTIPIYTSEICLP
EVRGITGSFLLTFYLGGYCLXVILGSAVHWRITIVSLVIFPIFSGIFLFM
APNSPIWLLQKGRDEEAFQSLVYFRDDILEVREEITAIKENLDLSKTKNN
YMESNSLWDKLRFKLNRFKSPEFVKPLIICVILTAGFV
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mRNA from alignment at LSalAtl2s180:521937..523223+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003295-699142 ID=EMLSAT00000003295-699142|Name=EMLSAT00000003295|organism=Lepeophtheirus salmonis|type=mRNA|length=1287bp|location=Sequence derived from alignment at LSalAtl2s180:521937..523223+ (Lepeophtheirus salmonis)
GTTCAATTGATCTCAAAAATAAAACTTCAACTTTTTGCTCGATAGTGATC
CATAGGTTAATTTGTACCTATATAGTACATTAATTATATTGTAATCAATT
TGAGAACAAAAYCCCCAGTCAAAATGACAAACAAAAACTGCATGGAGAAG
ACAAGCTCCAAGCCATTCCTTCTACAAAAACATGTGATACGTCAAGTAAA
ATTTAATTTTATTAAATGAATAAGGATTTTCCATGATTCATAATTAAATT
TAGATATGGGTCTCTGGACTAGCAAATCTTCTTCAAACCATGCAAGGTTT
TGTGATTGCTATGTCTTCGATCATGATTCCACAATTACTTCACACTAAGG
ATGAAAATGAGTTGTATCTCACGGAAGACCAAGCAACATGGTTCGGTATG
TCCCTTTACATCACCATTTATTTTGAGTTGACTAATGATCTACATTAATT
TTAGCAAGCATATATTGTTTTGGGTATCTTTCGGGTTCTTTCATCGGTGC
ATTTCAAGGTAACTATTTTGGTCAAAGAATTTCTTTGATCATTGATTGTA
TAACGGCAACTACTGGACTCTTAATGGTAGGATTTGCACCTTCTTTTCCA
TGCATGTGTATTGGACGACTATTGTGTAAGTTCATACAAGAGAATAAATA
TATCTAGCAAAATTGATCATCATTTATCTTAATGTGATAGGTGGACATGC
ATCCGCCTCTGGTACGGTGACAATTCCAATTTATACAAGTGAAATATGCC
TTCCAGAAGTTAGAGGCATCACAGGAAGCTTTTTGTTAACTTTTTATCTT
GGAGGATATTGTTTGMCCGTAATACTTGGATCCGCTGTCCATTGGAGAAT
CACAATTGGTAAGTCTCTGACTGTAACCTGTAATGGTCCCATAAAAAAAT
CTATCTAAATTACTATTTTTGTTAGTTTCATTGGTTATATTTCCAATATT
TTCCGGAATATTTCTATTCATGGCTCCCAATTCTCCAATTTGGCTTCTTC
AAAAAGGAAGAGATGAGGAAGCATTTCAAAGTCTTGTATATTTCCGTGAT
GATATTCTTGAAGTAAGAGAAGAAATAACAGCTATTAAAGAGAATTTGGA
TTTAAGCAAAACGAAAAACAATTACATGGAGTCAAATAGTCTTTGGGTGA
TTTTTATTCATTCAAAATTTTAACAAAAATAACTTCTTTCAATCTAGGAT
AAATTACGATTTAAACTAAATAGATTTAAGTCTCCAGAATTTGTGAAGCC
TCTAATTATTTGTGTAATTTTAACTGCGGGGTTTGTG
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