EMLSAT00000003343, EMLSAT00000003343-699190 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003343
Unique NameEMLSAT00000003343-699190
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1831supercontigLSalAtl2s1831:18760..20054 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003343 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003343EMLSAG00000003343-686109Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000014597EMLSAE00000014597-723525Lepeophtheirus salmonisexon
EMLSAE00000014598EMLSAE00000014598-723526Lepeophtheirus salmonisexon
EMLSAE00000014599EMLSAE00000014599-723527Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769402auto769402Lepeophtheirus salmonispolypeptide
EMLSAP00000003343EMLSAP00000003343Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003343

>EMLSAP00000003343 ID=EMLSAP00000003343|Name=EMLSAP00000003343|organism=Lepeophtheirus salmonis|type=polypeptide|length=386bp
MESQFWGVVLQPDKMYEQTVESSFHVSMAAVXATTLGSKITSVFVEAGGD
EFLICNLNNSNLNVHLDLNFLEGEKIGFRATGPGTVHLTGYLIPDTDDMI
DDLDSESECFEEDEEEAPVLVNGKGKNTKRKPDNSLIDTPNKKAKKELEL
ARAKKVQSDLNLKKKSQKKVESSDDDNDMEADDDTSDDGILDFTENYAEE
EDSVDESDDEYEDDSSVEEGDSSPTKKILEKIANKKESSLTTPKNNKKKD
NASTPKGATPKSAVKEQPKTPKSPKSFNVNGIQCEDIRVGSGPEVKKGKI
IGMYYDGRLKNNNKRFDATLQGKPFKFRLGSGEVIKGWDLGFEGMKVGGK
RRLTIPPKLAYGTHGAPPDIPPNSTLVFEVECKFVK
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mRNA from alignment at LSalAtl2s1831:18760..20054-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003343-699190 ID=EMLSAT00000003343-699190|Name=EMLSAT00000003343|organism=Lepeophtheirus salmonis|type=mRNA|length=1295bp|location=Sequence derived from alignment at LSalAtl2s1831:18760..20054- (Lepeophtheirus salmonis)
ATGGAGAGCCAATTTTGGGGCGTCGTTCTTCAACCTGACAAAATGTAAAT AAATATCTTCTCTTTTTTTCAATTTAATTAACTCTGATATTTTATGCCAT ATCTCTGGTGTAGGTATGAACAAACTGTAGAGTCCTCGTTTCACGTGTCC ATGGCTGCCGTCGMGGCAACGACTCTTGGRTCCAAGATAACAAGTGTGTT TGTGGAGGCTGGRGGKGATGAATTCCTCATTTGTAATCTCAACAACTCAA ATCTTAATGTTCATCTTGACCTCAACTTCCTTGAAGGAGAAAAGATCGGA TTCCGAGCCACGGTGCKTTATCCATAGAGATTTTGTTGCCTTTGATACTG ACCTTCCAATATTTATTATAATTACAGGGCCCAGGAACTGTTCATTTGAC AGGTTATTTGATTCCCGACACTGACGACATGATTGACGACCTCGATTCAG AGTCTGAATGTTTTGAAGAGGATGAGGAGGAAGCTCCTGTCCTTGTTAAT GGAAAGGGCAAGAACACCAAACGTAAGCCTGATAATAGCTTAATTGATAC TCCTAATAAAAAAGCTAAAAAAGAGTTGGAACTTGCTAGAGCTAAAAAAG TTCAGTCCGATCTTAACTTGAAGAAGAAGAGTCAAAAGAAAGTCGAGTCT TCGGATGATGATAACGATATGGAAGCAGATGATGATACGTCGGATGATGG AATATTAGATTTCACTGAGAATTACGCTGAAGAAGAGGACTCTGTCGATG AATCTGATGACGAATACGAGGATGATTCTTCAGTAGAAGAAGGCGATTCC TCTCCAACAAAGAAAATTCTCGAGAAAATAGCCAATAAAAAGGAGTCTTC TCTCACTACTCCCAAGAACAATAAGAAAAAGGATAATGCCTCCACTCCTA AAGGCGCTACTCCCAAATCTGCAGTAAAAGAACAACCAAAAACTCCCAAA TCCCCCAAATCTTTTAATGTGAACGGTATCCAATGTGAAGATATTCGAGT CGGTTCAGGGCCTGAAGTCAAAAAGGGAAAAATAATCGGGATGTACTATG ATGGTCGTCTTAAGAATAATAACAAAAGATTTGATGCTACCCTACAAGGA AAACCCTTTAAGTTCCGTTTAGGCTCCGGTGAAGTCATTAAAGGCTGGGA CCTAGGTTTTGAGGGAATGAAAGTTGGTGGAAAAAGACGTTTGACGATAC CTCCTAAGTTGGCTTATGGTACACACGGTGCTCCTCCAGATATTCCTCCT AATTCAACCTTAGTTTTTGAAGTAGAATGTAAATTTGTGAAATGA
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