EMLSAT00000003421, EMLSAT00000003421-699268 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003421
Unique NameEMLSAT00000003421-699268
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s188supercontigLSalAtl2s188:147091..148664 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003421 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003421EMLSAG00000003421-686187Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000014895EMLSAE00000014895-723823Lepeophtheirus salmonisexon
EMLSAE00000014896EMLSAE00000014896-723824Lepeophtheirus salmonisexon
EMLSAE00000014897EMLSAE00000014897-723825Lepeophtheirus salmonisexon
EMLSAE00000014898EMLSAE00000014898-723826Lepeophtheirus salmonisexon
EMLSAE00000014899EMLSAE00000014899-723827Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto773253auto773253Lepeophtheirus salmonispolypeptide
EMLSAP00000003421EMLSAP00000003421Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003421

>EMLSAP00000003421 ID=EMLSAP00000003421|Name=EMLSAP00000003421|organism=Lepeophtheirus salmonis|type=polypeptide|length=429bp
MTFYTHRILFLTFLLHFTTSQNTSRDSKFLGLFNVVQFANDVCNSTVNNE
QGICYTSQECNRFGGKAVSPCASGFGVCCVFVKNCRGDRSMGQEIMYFQN
DNYPDVDRLPNMCMLSIPIKDTNICQLRLDFIEFDLDPGSQFSSPCDQDY
LEIFTNSGSDGLGTGKLCGNNKGQHLYISLMSQFDSPSMRIVTDMRESSE
ESGKRGYRWNIKITQIDCNSASSTSELKAPDGCLQYFQERRGTITSFNWD
PALPRKYVPNQNYAICIQRSISDCELRLRRSAGIPKGSTSIGKPLTGGTC
GVNGCGVNDCIKSSGGNNDVMSDHLEINSFYNDVQNAQTDKKYKIEHIYC
GEGVGSTKARGNNNNNNGDEVEASEIISQTKGPFVISFFADEFSSDGNTN
TGTNKNMDELGFSLDYSLFTSCTKIIIMP
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mRNA from alignment at LSalAtl2s188:147091..148664+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003421-699268 ID=EMLSAT00000003421-699268|Name=EMLSAT00000003421|organism=Lepeophtheirus salmonis|type=mRNA|length=1574bp|location=Sequence derived from alignment at LSalAtl2s188:147091..148664+ (Lepeophtheirus salmonis)
GTGAATCAAGAAGGATCATGACTTTTTATACTCATCGCATTCTATTCCTG ACCTTTCTGCTCCATTTTACTACATCTCAGAATACCTCTCGTGACTCCAA ATGTGGGTTTAACATGTTTATTACGAATCATTAATTTATTTATGATCTCT TTTCAGTTTTGGGCTTGTTTAATGTGGTCCAATTTGCCAATGATGTTTGC AACTCAACAGTTAACAATGAACAAGGGATTTGCTACACGTCTCAGGAATG TAATAGATTTGGAGGGAAGGCAGTGAGTCCTTGTGCCTCTGGGTTTGGCG TATGCTGTGTTTGTAAGTCCTGATGGAAATGTATATAATATTTGTTAATC CTATTTGTGTTTAAAATAGTTGTTAAAAATTGTCGAGGGGATAGAAGTAT GGGGCAAGAGATCATGTACTTCCAAAATGACAATTATCCTGATGTGGACA GGCTCCCTAATATGTGCATGTTGTCCATTCCTATCAAAGACACAAATATT TGCCAATTAAGGTATGCTGGGTACACTACATATATAGAAACTTTAATGAA ATATATTTTTTCTATTTGTTAAAGATTGGATTTTATTGAATTTGATTTAG ATCCGGGATCACAATTTAGTTCGCCCTGTGATCAAGATTATCTGGAGATA TTTACAAATTCTGGCTCGGATGGKCTTGGAACTGGTAAGCTTTGTGGAAA TAATAAGGGACAACATCTTTATATCTCTCTTATGAGCCAATTTGATTCAC CAAGTATGCGTATAGTCACTGATATGCGTGAAAGCTCAGAAGAGTCTGGA AAGAGGGGCTATCGTTGGAATATTAAAATTACACAGATTGATTGTAATTC AGCCTCTAGCACTTCTGAATTGAAGGCTCCAGATGGATGCCTCCAGTATT TTCAAGAAAGAAGAGGAACAATAACAAGTTTCAACTGGGATCCTGCCCTT CCCAGGAAGTATGTGCCCAATCAAAATTATGCCATTTGTATCCAGAGAAG CATTTCTGACTGTGAGCTTCGTTTGAGACGCTCTGCTGGGATTCCAAAAG GATCCACCTCCATTGGGAAACCCCTGACTGGTGGTACATGTGGTGTTAAT GGTAATATATATATATTTTTAATTTCCTTGCCCATTTATAAACTCTTTGA TTTTTCTTCGTGTCTAGGATGTGGAGTTAATGATTGTATCAAAAGTAGTG GTGGKAATAATGATGTAATGAGCGACCATCTGGAAATCAATTCTTTCTAT AATGACGTTCAAAATGCACAAACGGATAAAAAATACAAGATCGAGCACAT CTATTGTGGAGAAGGAGTGGGTTCTACAAAAGCGAGAGGCAACAACAATA ACAACAATGGGGACGAGGTTGAAGCTTCGGAAATAATATCCCAGACTAAG GGTCCTTTTGTTATCTCCTTTTTTGCTGATGAATTCTCAAGTGACGGGAA TACAAATACGGGTACGAATAAAAATATGGATGAGCTGGGCTTTAGTCTGG ACTATTCCTTATTTACAAGCTGTACAAAAATTATCATCATGCCCTGATTA GTGACTCAACGACTTAACTATGAT
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