EMLSAT00000003423, EMLSAT00000003423-699270 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003423
Unique NameEMLSAT00000003423-699270
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s188supercontigLSalAtl2s188:230157..231297 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003423 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003423EMLSAG00000003423-686189Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000014906EMLSAE00000014906-723834Lepeophtheirus salmonisexon
EMLSAE00000014907EMLSAE00000014907-723835Lepeophtheirus salmonisexon
EMLSAE00000014908EMLSAE00000014908-723836Lepeophtheirus salmonisexon
EMLSAE00000014909EMLSAE00000014909-723837Lepeophtheirus salmonisexon
EMLSAE00000014910EMLSAE00000014910-723838Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto774937auto774937Lepeophtheirus salmonispolypeptide
EMLSAP00000003423EMLSAP00000003423Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003423

>EMLSAP00000003423 ID=EMLSAP00000003423|Name=EMLSAP00000003423|organism=Lepeophtheirus salmonis|type=polypeptide|length=293bp
MQGSPWDWQNSNAKYPVFEDSIYGRNGMTTAPLNPVTLHVSPNITVSVGE
AAHLPCLVDNLGEHTQVSWLRGRDTSVLSVGLHTFSSDSRFSVLHVPQLK
GTYWNLEIKDVSIRDGGWYDCQVNTEPKVSNKTYLNVIKDRKKSWIQGIE
PRRMSEYLGQHILPKAIISGPTALNIRVGESVALECSISPLKSPPLNLYW
RHKNTVVTPKSRVGISLENEKSTGVSHSRLVIQDVRLDDAGIYSCITDVA
AATSIELIVVDDDGAEALASYGSSLKLSWSPCLFLFLLFQARL
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mRNA from alignment at LSalAtl2s188:230157..231297-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003423-699270 ID=EMLSAT00000003423-699270|Name=EMLSAT00000003423|organism=Lepeophtheirus salmonis|type=mRNA|length=1141bp|location=Sequence derived from alignment at LSalAtl2s188:230157..231297- (Lepeophtheirus salmonis)
ATGCAAGGATCCCCATGGGATTGGCAAAACTCAAATGCCAAATATCCTGT
CTTTGAGGATAGTATATATGGTCGAAACGGAATGACAACAGCTCCTCTGA
ATCCAGTGACTCTTCATGTGAGTCCCAATATTACTGTATCTGTCGGAGAG
GCAGCACATTTGCCCTGTCTTGTGGACAATTTAGGAGAGCACACTGTGAG
TATTTATCTTCTTTAAAAAAAAAATATATGTATTTGAACCCACATTTGTG
ATGAGCAGGTATCATGGCTTCGTGGACGGGACACAAGCGTTCTCTCTGTG
GGMCTCCATACGTTTTCGTCCGACTCTCGATTCAGCGTGCTACACGTTCC
TCAATTGAAGGGAACATATTGGAACTTGGAGGTAAGGACTTTTAATATAT
ATTTTTAGTGTTTCCTGTATTCATTAAAAAAAAATGTTAACTAGATCAAA
GACGTCAGTATCCGTGATGGAGGTTGGTATGACTGTCAAGTCAACACGGA
GCCCAAAGTGAGCAATAAAACTTATTTGAACGTGATAAAGGACCGTAAAA
AGTCATGGATACAAGGAATAGAGCCACGGCGGATGAGTGAGTACTTGGGA
CAACACATTCGTGAGTTGTTGTTTTTTTAACACACTTTTTCCCCACCCTC
ACCTAATTTAAATTTTTATTACCTTAATTTTCTAGTTCCAAAAGCCATTA
TTTCTGGTCCAACTGCCCTCAATATCCGAGTGGGAGAGTCTGTGGCTCTT
GAGTGCTCTATTTCTCCACTCAAATCCCCTCCCCTCAACCTCTACTGGAG
ACATAAAAATACTGTCGTCACACCCAAATCCCGCGTCGGAATCTCACTAG
AAAATGAAAAATCCACAGGGGTCTCCCATTCACGCCTCGTCATACAAGAT
GTAAGGCTAGATGATGCAGGGATATACTCTTGCATTACGGATGTAGCTGC
AGCGACATCAATCGAACTCATTGTTGGTAAGTCCATTAATAGTATAACTC
TTTCATTAAATAATTTATGTATTCTTTCATTTACTAGTTGATGACGATGG
GGCTGAGGCTCTTGCTTCATATGGATCGAGTTTGAAACTCAGTTGGTCGC
CTTGTTTGTTCCTTTTTCTCCTTTTTCAAGCGCGACTCTGA
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