EMLSAT00000003511, EMLSAT00000003511-699358 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003511
Unique NameEMLSAT00000003511-699358
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s191supercontigLSalAtl2s191:432000..433969 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003511 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003511EMLSAG00000003511-686277Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000015267EMLSAE00000015267-724195Lepeophtheirus salmonisexon
EMLSAE00000015268EMLSAE00000015268-724196Lepeophtheirus salmonisexon
EMLSAE00000015269EMLSAE00000015269-724197Lepeophtheirus salmonisexon
EMLSAE00000015270EMLSAE00000015270-724198Lepeophtheirus salmonisexon
EMLSAE00000015271EMLSAE00000015271-724199Lepeophtheirus salmonisexon
EMLSAE00000015272EMLSAE00000015272-724200Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto777617auto777617Lepeophtheirus salmonispolypeptide
EMLSAP00000003511EMLSAP00000003511Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003511

>EMLSAP00000003511 ID=EMLSAP00000003511|Name=EMLSAP00000003511|organism=Lepeophtheirus salmonis|type=polypeptide|length=370bp
MRYYISLSIQCLFFTTILIELSTVKAKNQCINHHGDSGFCSHREICRLLK
GVNIGYCNSSMNIVCCMELPCSKSQTKIKNIAKFRVKKSSNTGRLIVPSC
GIRNERDRQVIGGQAVTDSMRHPWMXSLWQRNITTNQFADSFPICGAGII
TDRHVITAAHCIMNSPDAQNDLFLLGGSTINEIPLSYRRTRKVIMRIKKI
TIHPSFDFLKLENDIAIITLETPIKFRLDLSPICLPDPGDEVIKDYVTVS
GWGCLTEKCEASEAPSSLRETILPVIPNKIAMCWFMSDSKRKGREEYIPN
TLFLVGGDISGLKSTCRGDSGSPVTRPRPSDGRIEVVGLVSWSKGCGRKF
RPSVWTNVRNYLTWIYQNLN
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mRNA from alignment at LSalAtl2s191:432000..433969+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003511-699358 ID=EMLSAT00000003511-699358|Name=EMLSAT00000003511|organism=Lepeophtheirus salmonis|type=mRNA|length=1970bp|location=Sequence derived from alignment at LSalAtl2s191:432000..433969+ (Lepeophtheirus salmonis)
GTGGATATTTATAAATTATAATATAGAAAAAAATAACAGAACGAACCATG AGATATTATATTTCACTGAGTATACAATGTCTCTTTTTCACTACAATTCT AATTGAATTATCCACTGTCAAAGCAAAAAACCGTAAGTTTGCTTCGTTAG TTTGATTATTATTAATTAATTATATTGCCAGAATGCATAAATCATCATGG AGATTCAGGGTTTTGCTCACATCGAGAGATTTGTCGACTCCTGAAAGGTG TGAATATTGGGTATTGTAATTCTTCTATGAATATCGTTTGCTGTATGGAG CTTCCATGTAGTAAGTCTCAAACGAAAATTAAAAACATAGCTAAGGTAAG ACCATTTCAAATAGATACGATTCTTCAGAATCCATAGATAACCTTCTCAT TTTTCAGTTTAGAGTAAAGAAATCTTCAAATACTGGTCGGCTCATAGTTC CCTCATGCGGAATTCGAAATGAACGGGATAGACAGGTTATTGGAGGGCAA GCTGTAACGGATTCAATGAGGCATCCGTGGATGGMATCATTGTGGCAAAG AAATATGTACGTTTATTTGGTGTATCTGCATTTCCTGATACGCACGTTTT TTACTTATTTACAGAACAACAAACCAATTTGCAGATTCATTTCCCATCTG TGGAGCAGGGATCATTACAGATCGACATGTAATAACTGCTGCTCATTGTA TTATGAATTCTCCTGACGCTCAAAACGATTTATTCCTCCTTGGTGGATCA ACAATAAATGAAATTCCTCTATCCTACAGGAGAACACGAAAAGTTATCAT GAGAATAAAGAAGATCACAATTCATCCAAGTTTTGATTTTCTCAAGCTGG AAAATGACATAGCTATCATTACCCTTGAAACGGTATAAATTATACTGACT AAAGAAACGTGTAATAATGCTAAATTTATATTGTTAGCCAATTAAATTTC GTCTGGATTTATCCCCCATTTGCTTGCCTGATCCTGGGGATGAGGTTATT AAAGATTATGTTACAGTCTCGGGATGGGGATGTTTAACCGAAAAATGTGA AGCAAGTGAGGCGCCATCCTCATTAAGGGAAACTATATTACCAGTTATAC CAAATAAAATTGCAATGTGCTGGTATGTTACANTTTTCATACCTAACTAT GTATAGTTAAATAAAAAATCCATCTTTATTTAGGTTCATGTCAGATTCTA AGCGAAAAGGACGTGAAGAATATATACCAAATACGTTATTCCTTGTAGGA GGTGATATAAGCGGGCTCAAATCAACTTGTCGTGGAGACTCTGGATCCCC TGTTACCCGACCAAGGCCCTCAGATGGGAGAATAGAAGTTGTTGGTCTTG TAAGTTGGAGTAAAGGATGTGGTAGAAAGTTTAGGCCCTCGGTATGGACA AATGTACGCAATTATTTAACATGGATATATCAAAATTTGAATTGAACGGA AATTTTAATGATTTAAAGCTCACAGAACCTTTTATGTAATTCGTAACTAG TCATTTTTTTTAAAATAGAAAGTAAAGTTTTACTCATTTTTTAAATTAGA AAATGTGGATTTATTGTATATTAAAGCATATTTTTTCACTATACATTATT TTATTTTAAAAACAATTTTTTCTCGAATACATAAATCTAATTTTGTTTAT GTTATTCGTTCTTGAGTAGTTGAGAGGGAAATATTCCCGTTTGTTTAATA ATTGAATTTAGATATAACTGCATAATATATAGATTCGAATACATTTAGTA ATTATGACTTGTTGTGTACGTTGATGTTCGCATACATTTATCATAATTAA ACCTTAGCTCTACTCATGGATCAATCATTCATCTGATTATCGATTTATGT CATCTACTTCCTATCTAGGTAGTCATATCAAAAATACATTCCAAACCATA CATTTTAATGGCCGTGTGATCTTATTAAGAATAAAAGCTATAAGAATGTG TTCAGTCCTATATATTTTAG
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