EMLSAT00000003578, EMLSAT00000003578-699425 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003578
Unique NameEMLSAT00000003578-699425
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s19698supercontigLSalAtl2s19698:24..447 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003578 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003578EMLSAG00000003578-686344Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000015591EMLSAE00000015591-724519Lepeophtheirus salmonisexon
EMLSAE00000015592EMLSAE00000015592-724520Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto767833auto767833Lepeophtheirus salmonispolypeptide
polypeptide-auto767834auto767834Lepeophtheirus salmonispolypeptide
EMLSAP00000003578EMLSAP00000003578Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003578

>EMLSAP00000003578 ID=EMLSAP00000003578|Name=EMLSAP00000003578|organism=Lepeophtheirus salmonis|type=polypeptide|length=109bp
MDDDHEIVYKIEVNDTSSLSLSAARITTSPSLARKKKRRHHQVCAVANCP
NPRDVSYHSFPKEPELQIMWVQSCGRDKVNPKTARICGSHFLKDDFLRDL
KNELLGLPL
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mRNA from alignment at LSalAtl2s19698:24..447-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003578-699425 ID=EMLSAT00000003578-699425|Name=EMLSAT00000003578|organism=Lepeophtheirus salmonis|type=mRNA|length=424bp|location=Sequence derived from alignment at LSalAtl2s19698:24..447- (Lepeophtheirus salmonis)
AGCGAGTCCGTTTTTCTTGTGCACAGAATTGAATTGGCAATTGTGATGGA
TGATGATCATGAAATCGTCTACAAAATTGAAGTGGTAAGTTTTGCATAAG
GATCTTAAGATTGAAGGTTTAATATTATCTTTATAGAATGATACTTCCTC
TTTGTCCCTGTCGGCGGCAAGAATTACAACTTCTCCCTCCTTGGCCAGGA
AGAAAAAGCGAAGACATCACCAGGTCTGTGCCGTTGCCAACTGTCCGAAC
CCCCGTGATGTGAGCTATCATTCCTTTCCCAAAGAGCCAGAGTTGCAAAT
CATGTGGGTTCAATCCTGCGGACGAGATAAAGTGAATCCCAAAACGGCGC
GGATTTGCGGCTCGCATTTTCTTAAAGACGATTTCCTTCGCGATCTCAAA
AACGAGCTCCTTGGTCTTCCCTTG
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