|
Associated RNAi Experiments
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
LSalAtl2s1 | supercontig | LSalAtl2s1:2957331..2965200 + |
Analyses
This mRNA is derived from or has results from the following analyses
Analysis Name | Date Performed |
ensembl | 2013-09-26 .965016 |
Properties
Property Name | Value |
Logic name | ensemblgenomes |
Biotype | protein_coding |
Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000003710 >EMLSAP00000003710 ID=EMLSAP00000003710|Name=EMLSAP00000003710|organism=Lepeophtheirus salmonis|type=polypeptide|length=260bp
MQLPGYIFLASVLFLSDYVWCGVLSNNNGEGETFSSTPSSKTQTYFPNLX ADTTTTPKATTATPTVAXSSSVTTSKSYSSTEAVKSGSPPSTISSTRXII TTGIRPPTHQDSSHPRVERSXLFLDDENNNPXYPYRDNPHPGDDTNKKRG SNQGFSPESIAVSGRKMARNFMIRTPRSGRRYDVAQIECPRSDDRLERFA CPTPDFRNRYRCIDDRSLCDGFYDCPGKEDENPEQCLFYKTTKAHLDILA EALLRWARGR back to topmRNA from alignment at LSalAtl2s1:2957331..2965200+ Legend: polypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000003710-699557 ID=EMLSAT00000003710-699557|Name=EMLSAT00000003710|organism=Lepeophtheirus salmonis|type=mRNA|length=7870bp|location=Sequence derived from alignment at LSalAtl2s1:2957331..2965200+ (Lepeophtheirus salmonis) ATGCAACTTCCCGGATATATTTTCTTGGCATCCGTACTTTTTTTGTCGGA
CTACGTATGGTGTGGTGTTCTCTCAAATAATAACGGGGAAGGGGAAACCT
TTTCCTCCACACCATCTTCAAAAACTCAAACATATTTCCCTAATTTAYCC
GCTGACACAACTACTACCCCAAAAGCCACTACGGCTACCCCAACAGTGGC
AGSATCATCATCAGTAACAACATCAAAAAGCTATTCCTCCACGGAGGCGG
TTAAGAGCGGTAGCCCTCCTAGCACCATTAGCAGCACACGGAGKATTATC
ACAACTGGAATCCGGCCTCCAACTCACCAGGATTCAAGTCATCCTCGTGT
TGAGCGTTCAKTACTTTTCCTCGATGATGAAAATAATAACCCTGAKTATC
CATACCGGGACAATCCTCATCCTGGTGATGATACTAATAAAAAAAGAGGG
AGCAATCAAGGATTCTCTCCAGAGTCAATTGCAGTTTCTGGAAGAAAAAT
GGCTCGTAATTTTATGATTAGGACTCCTAGATCTGGTCGAAGATATGATG
TTGCCCAGATAGGTGAGAAACGAATATTTTTATTTTATATTTTTAAAGTA
CATGAATAATCATTTCAATATGTATGCCTGAGTTGAATACATAAATCTCT
TTTTGTACATCAGAGTAAGTAGTAAGGAGGAGAAGGATGACCATAATTGG
GATTTAGAAAAGTGGTGCAAAGGTTAGGATTTCAAAGGAAGAAGGACAAA
AAGAAGAAAAAATAAAAAAAACAATAATAACAAAATAAATGAACTATTTA
TATTTATAAATAAGAAAGCTCTTGAATTCTCAAGTAAGAGAAACGCCCTG
TCTTAAAAAATATCTAACTAAAACTTTTTTTTTCTTTTTTTTTGATGGTA
GACTTTCCAATGACCATCAAAGTACTAAGTACATAAACAGGGATTTCCTC
CTTTTACTTATTACAAATGTAAGGGGAGTTAAAAAATATGACAATGATTA
CGTATATACAAATTCTAATCATAAAATAAAAACAGACCTTTTTATCGTCG
TCATTAAAATGAATTTATGTACAAAAGAGAAGTGCCCATATCTTTTCAAT
AAATACAAAAATTAAAAACACCCCCCCTCCCCCCCCCCCAAAAAAAGTAA
AGGGGGATAATACAAATAGAGTTAGTTTCTTTACCAAAATGAAGCAAACA
TATAATTATTTCAAAAGTAAGAGTCGCTGTGTGTTTTTTTTTATCTTTTT
AGTAGTCTTCTTCACTACATATTTCTTGTCCATGTTATTATTATTGAACA
TGACGTCATTGTGACGTCAAAAGGCAAACATTTTTTTGAATGGGCCCGGG
GCTTGGGAAAGTATTTTTTTTTTTGCGAGTAGAGGAGGCAGAGAAGAAGA
GACTGAGAAAGAAGAGGGGAATAAGTTTGGCGAGCGTGCATCTTTAACCA
ACTAACTAAGTATTCATGCTTAAGTAGGTGGTGTGGTATATCGCCTTTTG
AGGAGTAGGAGAGGAGGAAGAATAATGGAGAAGAAGAACTAGTAGGGGGG
TTGGAAAGAGAGAGAGAGAGAGAGGGAAATAACAGCATACATTAAGAGAG
AAGAAATTAATGTGATGATAATTTTAATGTATATATCTTTAATTACCGTT
CATTCATTCCTATTATAATGATAATGAAGTCAGTAGCTAGTCATTTGCGC
TACAAACCAACAACAGGTAGGCGGGTTGGTGGGTGGGAGGAATAAAAGAA
GGGGGGGGGGGGAAGAGAAAGGCAGTTATSAACATCTTWTTAAGGATGAA
GAGGKGCTCTTCGAAAGAAGGAGACATGCAATGATGAGGGAGAGGAAAAG
GGGGGAGGAGGCGTAGAAATGAACCCTTTTGGGATGATCATGAGACCCAT
TTTCCTTGGTGGTGATTTCTCCCCCCGTCCCCCTCCTCCTCCTTCGAAGA
AGAGAGTCACAAATGTTAAGGGAGAAAAAATTAGACACTATATACCATTT
AATTTTTTTCTTCTTTTGCTATTCTCTCTAACCCTCTTGGTGGTTATTGG
TATTAGATCATTCTGGCCTTATTCAAAAGATAAAAATAGATGCACTATTT
AATTTAATATATGATATCCCCCCCCCCCTTCTTCTCGATTTAAACAAAGT
AAATTRAATTTTGGAATCGTACTGTGAAATAGACAGCAACATTATTAATG
TATGTACATACAAATGTTATATATGGTATAACATAACACATACACTAATA
AAAAACATGATTACTTAAAGTTAACACCTTGACAAACATATGTAAATAAG
AAAAGATTTGAAGGTGGATGAGTCTACTTGGTCATTCGTTCATGTTCCTG
CACACAGTATTATAATAAAATAAGAGGTCAAAGAAAGGCCACCATACGAT
TAATATTGGTCAAAATATACAGTTGGCAAGTAACAAATATCCGCTTTAGT
GTTGAGTGTATGTACTTAATAATCCACTATAACTAACAACTACTCCGAAA
CCTTCATCAATTTATCCTTTTAGAAATGCTATAATTAAAAAAAGCGGGTT
CATTCCGATTCAAAAAGATAAATTTGTGTATAGGTCATGAGGCAAAGGAT
AGAATAATGTAATCTGTATCTTTAAAAAGTACATCTTGTGTAGGGCAAAA
GATTTCACAAATGGCCAGTGGTTTTTAAACCAGAATAATAATCGTAAATG
TAATCAATCAAAGGAGGAAAATAAATTTTGAAATTATGATCTTGTACATA
TGTGGTTAGTGGGAAATGTCTAGTATTATGCCATCATACGTCGTTTTCCC
GTTGTTTCACAAGGAACTTTGAGCGTCTACAACACCTGTGCATGCGCAGA
TAGCATATTTTTTATTTATTTTTGCCGGCTATGCAGAAGTGTTTGGCGTC
AGTTCAAAAGTGACATGGATCAACGAAGTATGTATTCCACGATCGTGGAA
AAGGTAGAGTGTCCTTGTTGCAATCCCCTCTGGCCGTGTCAATCTTCATA
TTGTAAAAGTGGGGCAGTCATTTGTTTGAAATTCAAGAAGGAGAGGGAAG
AGTTTGGGCCAGAAAATAAAGATTCTCTTCCTTTACAGACTGCAAAGAAA
ACGTTGACCTAGTTGTCAGAATATATTTTGACTTTGTTGGACCAAGAATT
TAGTCTACACGCTGCCTGGACCGCAACTCCATGGACTTCTTTGTGTAGGA
TGCAACTGAAAACAAACCAACAGATCCTCCTGCAACAGAAAATCCGGGAG
GAGTTCCGGAATCCTTCCGGATGATTAGTTAAGGAGAAAATCCAGTTGCA
AAGAAATATATTGAAAAGAACAATATCATTACTCACGTCATTTATTATCT
AGAGCTAACTCTCCCATAATTTGAGACCCCCTAACAAAGACTAACCGCGA
ATATACTTTTTCACATGTTGGTTTATAGCTTTGCTCCAGCGGCAATACTC
TCAAATTGATGTTACATGAGTCACATTAATTATGGTATTCAATGCATGTA
TGATAGAACCATCCTAATATGTGTATGTACATATATGTGTATAGAGATCA
CATAAATCAAATCTCTCTTGTACATACAAAAACACTCCAAAAGGAAAACT
GATAAGATGAGAAGAAAAAGGGGGAGTGTAATTTTATTAATGGAACTGCT
TTCATGATAATAAAAATAATATTATGGAATTTTTCCCTATTTTTTGAGTG
TTTTGTTACTTTGTCATTTTTTATAATATTTATAATTATTATTTTTGAAA
TTCTTGAGTTAAAAATGCGGTGTGAAGAGAAGGAGGGACTCATATTTGTG
TCTTATCATTAGTAAATATATACAATACATACATACACACACAACTAACT
AAAAATGGGTCAGACATCATTTATATAGTCCTACTTTTCTTCTTTTTCTT
CCTTCCTCTCTCTATGTATATAAGAAGGGAAGGCAAAATTGCAGTAATTC
CTTATTAAAGTGTGTAACATACATACATAACGGAGCTGCGATTGCTACAA
TCGCTGGTTCTTGGTATTTAACTGTTTGTATGTACGTATTTCCTCTTTAG
CACTATTTCTTTTGCTTCAAATACAAAGAAAGAAGAAATGACTCAAAAGT
GGTTTCTAAAATATATTTATACTCAGTATTTAAATATTTAGAGAAACATA
AGACGATGAATAAGAAGTATGTAATGAATTTTTTAACTAATTCTCGCATC
CTGAGGAAGATATACATAATGACGTAAATGTGTAAACGCCAAAAACTCTC
TCTTTTTGGGGACATTTTGACCATGGCTTAACCTTCATTTTGATTGATTT
ATTTGCATACATGTTGTAGGGCGCAATTTAATGACAAATCAACTGAACAT
CGTGCAATATTAAAGACAAACTTATCAGTCGGATCAAGTAGGAATTCTAA
GATTTATTTATTAAATAAATCAGAATCCATCTAGATTTCAGAATTTGGTT
TTATTTTTAAATATAACAATTGGTTAGAGAGAAAATTGCATTTACAAAAA
ATCTTTTCGCGCCACATATTGCAATTGCATACTGTAAAATTATACAGGTA
GTTTTCGAATATAAAATAATATACAAAACTAGATAGATTACATGGATCAG
TTTAAACTATTTCATCAGAGCTAAAAAGTACAAATCCTAACAATCTACTT
GAATACAATTTAGATTCACACTAAAGTACCAGAGTTTTTTAGCATGGCAT
CACCCAAAAAAATTGCTGAGTACTGGAAAACTGTTTTATATTTATCTGAA
ATGATAATGTTGCTCTGCTCAATTTTCCAATATGGCACATTTCTTGAATA
TCACACTTCCTTTAAGGAATAGGCAGTACAGCCAACAGTTTTGCTTATTG
CCAAATAACTGTACAGAGAAGGGTCTGTTGTATTCATCACTCAAATGCCA
TGTGAAGTGCGAAAAGAGATGTACGTTTCCATAGGTTCAGAGGCGTGCAC
TCAAAATCCGTTTGGGAGCAATCATAAAGATTGAAGGTGTACAAAACTGT
TTTTTATTTAAATTATAGGCGACAAGTTTTCTAAAGTATTTAAAATATAT
GACACCATTAGATGGAGTTTTCTGGCTAGATCTTTAAGAGGTTTTGGATA
GGCTCCAACTTGGAAATATATTATCTGACACCCCGTACATAATGAGTAAA
ATCCCAATTTTTTGTTGCATCTTGACCATGGTAAAAACTTCATTTATATT
TAATCTAGTATTTATTGATTGGGCGTCTTTCTTTTCCTTTGGATACCTGG
TCCAAAGGAAGTCAGCTTATCTCTTCTTAAAAATTTATGTATATATCAAA
TATCTCTCTTTTTTTTNATAGGATAAAATTTTAATAATTTAAGAGACATA
TTTGAGATACATATATAAAATATTTTTAAGTAATCTAAGAAAAAAATAAT
TTTTATCCAACAATCAAAAAAAGTTTTCATTATACATTCATACATATATA
TACATACATATCTGGCTCCAAAATAAATTCATGAATTTTTAAACATTAGT
CTTAAGACTATACACAAACGAAAAAATATTTTCTTTTCTTTTCCTTCCTT
TACAGAATGTCCTCGGTCAGATGATAGGCTTGAAAGATTTGCCTGCCCAA
CACCTGATTTTCGAAATAGATATCGATGCATAGATGATCGATCACTCTGT
GATGGTTTCTATGATTGTCCCGGAAAAGAGGACGAAAATCCAGAGCAGTG
TCTCTTTTATAAAACGGTAAGTGGTTTTTTAAAATGTTTTTCTTTTTAAT
GTAAAAATCAATTACAATGTATAACAAAAGTTTCATGTCTTGAGATAATC
CCTTGGGCTGAATCCCACAGTCACTATTGTTGTTATATAAGCTGTAAAAT
ACAAAAAGACCATTAAAACTACTTATAACAAACAGAGTTTTGAACTCTAC
TGCCATTTTTTAGGAATTTGAAATAGGAATACGAAATAGAGCAAGCATCT
TTCAAATGCTGATTTTTTTTTGTTGATAAGGACGTTTGATATTTATTTTC
ATCTATATTTCACATGAAATATCTTTATTTTGTGTTGAGTTAGTCCTTAT
ATATCCGGTCCAGTTAAGTCTTTGGATCGGTTCTATCAGTTTTTTGGAAC
GGTCCTTTAGACTTTTTGGTCTTTTGGACTGTTAGTACTAGAACTGATTT
AAAAATAAAGTTGATTGATGTCATCAAGGACCAAATTATATAAGCTTTAG
GACTGACATGCAGGACTCAATTGAACAGGACGGGATTGCAGTCTTCCGTC
CTAAATAAGGAATGACGCAACACTACCACTAAGTATGGTTCTAAATCAAC
ATCTCTATAATATAAAAACATCTTGCTCTTTGGCCTACACTAGCAATTGG
CAAACATAGTAAACGGAATTTTGGCTAGAAAATATTTTGCTGCGTTCTTA
GTAACATGATAAAATCAATGTTGTTAATATTCTGATCTTATAAAATAGTA
ACATAAATAAATATTTTTCTACTAATAAATAAATAAAAAATTATTAAATA
AAACCATTAAGGCCGAACATTTAAAAAAAATCAATTTAAAAATTAAGTAA
ATTTTTTATTCAAATGATCTTTTTTTTTCAATATAAATTTTTCTATAAGT
CTCAAAATTTGTCCATATATTGTTTGACTATTACTTAAGAATTACGTATT
AGCAAAAAGGTATGCCTAAAAATTAAAACTAAAGGAGATACTCTATTATT
GCTGTCCAAACTTTATCATTTTTTGATGAAGCCTCCGTTATATAGAAATG
ATATTTTTTAATTACAAAATGGATTCAAATAACATCAGTGAAGTATTCTC
AAGTATCTTTGCAAGTGTTACTTTAAAAATAATTTTTGCTCCTAAGCGCA
AATATTATTTCTTTGTAAAAGGTTTTGATGTGGTTCTTGGTTCGTTTTAC
AGGCTTACGTAACAATAATATAATCTCTTTGAGCTTCATCCCAAAGGATA
GATAATTTTTATCATAATTATGTACTTATGTTAGTTTTTTTGCAAGCATT
TCCTTCAACCTTTTTTTCCATTCAATTCTCTTACAGACAAAAGCCCATTT
GGACATATTAGCTGAAGCATTACTGAGGTGGGCTCGAGGACGATAAAACA
TCTCTTCTCATAACCATATGTATGCATATGCTCGTTATCCACCTTTTCTC
ATATCTTTATCCAAACAAATAACAAAACCAAAAAATCCCATTCCATAATA
ATAACTCAGACATGAAATCCTCCAACTCCAAAAATCATGATGACTTCGTC
ACAGATGCACTTACAACACAAACACACAAATATATATTATGTTTTGCTTT
TATTTATTTCCCAAAACCTCGTTTATCGATGATGACCAAGTGATGATGAT
GTTTATAATGACACGGATGTGAAGAATGTTTTAATTAATATTAATTAACT
ATTTATTTATTAACCTCTACGTAATATTATATKCTCTAACCATAAACCCC
ACATCCAACAACACTCCATACTTACACAGCAATCCATATATTTCTACTCT
TTATTACTGGACAGTCAATTTTTTACCCAATTTCCCCATTTTTCTAATTT
TTTTGATTTTTTAATCTGTTGTTGTTGATTGAAAAAAAGAAAAAAAAACC
TTTCTTCCACATACTGTAAAAAAAAGAAGAAGATATATTTACAAAAGTCC
CCTCCCCCCTCTCTTATTTATCTTTCTAATTACTTACTTGCTTGCTTGAG
TAGTAGGTAATCATTATTACATTCATGAATTTCTAAAAAATAAAGTAATT
ATATGTATACTCACCGGTGCTGCCAAATGGTATATGTTGCTACATGTCCT
CCACAGTCTCACCCACCTCCGTCATCACTGGTAGACAATGGAGTTACGTA
CATAGGCACATCATTTTTTC back to top
|