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Associated RNAi Experiments
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
LSalAtl2s2039 | supercontig | LSalAtl2s2039:3647..12796 + |
Analyses
This mRNA is derived from or has results from the following analyses
Analysis Name | Date Performed |
ensembl | 2013-09-26 .965016 |
Properties
Property Name | Value |
Logic name | ensemblgenomes |
Biotype | protein_coding |
Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000003771 >EMLSAP00000003771 ID=EMLSAP00000003771|Name=EMLSAP00000003771|organism=Lepeophtheirus salmonis|type=polypeptide|length=610bp
MKRILSLMCLCIFHSFQGFFRRSIQQKIQYRPCTKNQQCNIQRINRNRCQ YCRLKKCIASGMSRDAVRFGRVPKREKAKIFSAMQSSRMKTQEANVLSEM SDDXKIIEEIVRAHYDNXDYTKNKMEPFLAKAKENPVYVPCTGMVSQGMT KGGIFKNNNIFHRHLPSLYNVSCVYLKVQTNNFFSPLQSLVCLNGDIIRK ETINQLAAGNAKFLMDSVFELAQRLNQFNLSDAEIGIFCSVVIITPDRPG LRNPELVQKIQNKLKNILNNILIPQHSDSPGIFSELLSMVHDLRTLNTLH TEKFLKQCKIDRSDMGGSSEGSTLQKHLLHGSKGQLYPHQHHWNGGSHSQ LDRESLGGVSSSESGCSSEVSRLTVLDLKVNNSVLLNALSLGSRFRLPSE VAESEFNNYQHPCHQTSSPPSSGGCNXNTAANAKNHIINNNNDHHYPNNN ASTHHQIQTPSSANPLVVASSKCPFKTSKLDSPSDSGIDSPKNQGTSICS SPRSFVEEDKHLHKDEEENETLVVESSPPPQPQSSHVSEEXHPLLKRALQ QPPQAYNGVPPLTSNAISYFQDEVYKPHKKFRRYNLSNSTAVPRIYLHHG GPLGNEDCYP back to topmRNA from alignment at LSalAtl2s2039:3647..12796+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000003771-699618 ID=EMLSAT00000003771-699618|Name=EMLSAT00000003771|organism=Lepeophtheirus salmonis|type=mRNA|length=9150bp|location=Sequence derived from alignment at LSalAtl2s2039:3647..12796+ (Lepeophtheirus salmonis) ATATTAAAAATACAGTTAAATATTGTTGTTCTTAATATTAAGTTTAGGAG
AATCTTGGAGCAGAAATAAACACACAAAAAAAAACAGCAACAAAAAATTA
AATATATATATAATAACGAGGGCAATTAATCATCCCCCTTTATATAAGTG
GAGTACAACTTTTCCGCTCCTGCTCCAAGGACGGAACCGTATATCCCTCT
CAACTTACTTTATGAAAAGAATACTATCCTTAATGTGTCTGTGTATATTC
CATTCTTTCCAGGGATTTTTCCGTCGATCCATTCAACAAAAGATTCAATA
TCGTCCCTGTACCAAGAATCAACAGTGTAATATCCAACGAATCAATCGAA
ATCGATGTCAATATTGTAGATTGAAAAAGTGCATTGCATCCGGCATGAGT
CGTGATGGTAATTGGTTTTTTTAAATTTTTTTCTGTGCTTTTGAAGTCAG
TTGCAGATCTTAACAGAGCCGTAATGACCATCATCCCTTTGCCATCCTTC
TTCTATGAAAATTAAATAGTCCAAAACAACTTAAAACAAAGGATTAAAGT
AGAGAGGTCGAGATTACTATTATTATTATATATATATAAATGTCAAGGCT
TCCAAGAGCCCTTGGACCCTCCTCTTAACTTATCCCTTCAAAGGGAGYAA
GAGGTTGTGAGATCCTATTATTATTGTTATTGCAGGTGTATGACTATTAT
ATAATGCCCGTAGCAGAGGGCGGTTGTAAGGGTTGTGGAACTATATTTCC
YCYCCCCCCCCCCCAAAAAAAAGCGCTAAAAATGTAAGATCAAAAAATAA
AAAGTAATATTTTTTTAATTATGAAAKCCTCTTTCAAATATGAATGTACA
CAACCCTGTCCTCAAACACTAAAAGAGAGAGGTTGCGAGTTAATTCTTAT
TATATATTTATGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNATGTACAATGTACGTAGTTTTTAT
TTGTTAAATTAACGATTATAAACCAGAGCTGCGGAGTTGGAGTCGGTGCC
TGTTTTGGTGGTGTCAGAGTCAGGAGMCGGAAAATGTGTACCTACTCCGG
AGMGTTAGTAAAGTGTTTTTTTAAATGGTTATAAATTATAGGTATTAGGT
ACTTTTAATTTATGAAACTTGAAAGTTAACTCGTTTATAAGTTTACCCCA
CAAATTTCAAACGTCTATACAATCACAATTCCCCAACATATCTTAAGTGC
AATTTATGATATTGGGCAGAGCATAGCCACCAGCCACGCTAGTTCATTAC
TATAGTTTATTGAATAGTCAATGTCATCAAAGTAAAGTGAACGTCGCAGT
GAGAGGTTGTTTGTATTGTCGTACCTCGGTTACGAGTGCATAAATTATAT
TCAGAAACTTATAAATGTATTAGCTATAGATTGATTTTGATCCATTTCAT
TTGTTGTTCATCTTTTTAATATCTTATATTCCAAATATTTTCTTTATAGC
TGGCACAATTATTTTTTTACATATAACTAATAACTACCTATAGCTATAAA
TTAGATTTTTATGGTCCCTAGACTCAAATGACTCAGTAGTACTTATTTAA
GTTATAAAACCTATTATTAATGATTTTGTGTTGTAGTTGGATCCGGAGTC
GGAGTTGGGCATTTTATGTACCGATAAACACACCGTAATCTCTCATTGTA
TCTGGTAGCCTTTCCTCTATAGAAAAGAGACACACAAAAGGCCCAAAATT
CCCTGGAAGTTCGCCAATTTCGCAACTTTTACGACTACTATTCGTAGAAC
ACTTTATCAACAGCGTATACAAAATACATTGGAGTTGTTGATGATGTTTA
CAAAATACTCTTGCGTTAATTAAGAGTACTAAATGAAATCGAGGGAATGA
TGATGTACGTTAGAGTTAGTAGTTGTACGGAATAAGAGAGAGGATCAATG
ATCTTTATTTATTGAGGAGCAACAGCTTTTCAAATCATTTCATATTATTT
TTCTTCCTTTTTCTCTTTCCTCAGACATATCCATCTGTACTTCATGTACT
CGCCTTTCCCAAAAGGAAAGGGTGGTGATGCTTTCTTCTTCTCCTGTTTC
TTGGGTAGGGGGGGGGGGGAGTGAGCAAAGGACGGTATCTCAGAGGACTG
AAAAAGCCTTTGCGTGTGTGGTGTAGCATTAATACAAAATGCATTCAGAG
AGAAATAATCAAAATAGCATTTCAGCCTTTTGACCTCCAAAAAAGAAAAT
GTTCAAGGACAATACTCCTTCCTCATGTATCACATACCCTTCATATTTTA
TATCTTTACAACAGAAGTAATACTCCATTTAATGCTACACGTTTATTTTG
ACAAAATATTTTATTAAAATCACTATATATAATATTATTGTTCCTTTTTG
CTTGCTTGAAGTTCAAGGTCGATTTGTTTTAATACTTTTTATATTATTAT
GGAACTACCACAACAACATAATCTGCAGTAATATGTTTCCTTCTGCATCA
TCATTCTTGCTCAACCCCCCTCTAACGCTCCCCTCCATTGTCTTTTTATT
ACAACATACCATGGTTTAAACAGCAGTTTGGTGCTGTTTATTTTGTAGTA
GAGGCCCTAATATTTACCAAGGTTAATAGAAATACAAGGTTAGACTATCA
TGTAATCGGGCTTGCTGGAATTTTCAATCTGATGTATTCTACCGACAGCT
GGGCAAGATAGGCAGATTTTGACAAAACACGCAATCACTTATAGTCTATG
ACGTCACTATTGTTAGAATTTTCAATTTAATGTATCGTATCGACNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTAGGTAAGA
AAAACAGATTTTGACAAAACACGCAACCACTCATTTACCATGACGTCAAT
ATTAAAAGCGTGGTGGAAGTCAAACATCACTCGAACACGCGTTATGGTAT
AACCTTGTATTTCTACTAACCTTGATATTTACATATTATTTGATTATATA
GATTATAATAGATTTTCTTTCACATTAACTTAATATTTTTTAGTTAGTTT
GTTAAATTCCAAGGAGCCGCAGAGCAAGCGACCCCTCTCACGGAAACGGG
CCTGCGTATTTTTTGAATTGAATCAAATTCACTTCGCCCTTTGGTAGTAG
TACAAATAGTAACTATTATAGTAGTAGTGCCTATCACCGAAGCTGCTGTT
TGCGAGCGTGCGCTTCTCTCTATCTCTTTGTTATTTTTTTTCTAATATCA
TCTCTTATTAACTCTTCATAGTACAATTAAGACTGATGTTGAAGTGTTTA
AACTGGTGTGTATATCGTGATATGAATGGACGTGAAGTCGACAGAACTCT
ATTTATTATTATTATTTGTTTTCTTATCCTCAACACTAATAAATGACCTC
ACTTATTCATTAATTATAGCACCACCTCCTTATATTCAGATCCATATTTG
AGTAGTCTTCAACATAATATAATATATACTCCATTTCACCCAGCATGAGT
GGTAGACACGTCAATTCCACTCAGTCATCRCCTTCTATCCTTAAGGGTAT
ACTACAAAACGGCTCTGCTTTTAACTATTCAGGTGTGCCATTGGGCTCAA
ATGTATTTAATGTTAAACATATTTACATGTCTTCTTGTCATTGAAGGATG
TTTGTTATTATTGAGTTTTATTTATAGCTGTAAGATTTGGTCGAGTGCCC
AAACGGGAAAAGGCCAAGATCTTTTCTGCCATGCAATCATCACGTATGAA
AACTCAAGAAGCCAATGTACTCTCAGAAATGAGTGATGACKCCAAAATCA
TTGAAGAAATCGTTCGAGCTCACTATGATAACKGYGATTACACAAAAAAC
AAAATGGAGCCATTTCTTGCTAAAGCCAAAGAAAATCCCGTGTACGTTCC
TTGTACTGGAATGGTGAGTTATTCTTATTTTCTCTTTTATTTTGTAATAT
TATTTCACGTATTAAGGAGCCTCATCTTCCTAATTATGGGCAGATCATCC
AATAGCCTATGAATCTATGCACACCTTTTTTTAAGTTTCAATTTTAATGC
GTCCTTTTAATATAAAGCTATAATTATAATACAGCAAAAATATTTTTTTT
TCTCCAACTATCAAATTACTTTTCTTTTTTTCCTGTTCGTCTTCAAATTT
CTTCTTCCTTTTATTCATCAATGTAATTCAATCCAATCTGGATTTTTTTT
AAATATATATATATTTACTAATAATTACTAATTAATTATAAATTCTACAT
ACATTTTCCACAATTCCACTCCAGTCCAAAGGTACATTGTAAACGAATCT
CACATTGCACATGAACACCCAAATCCCTTCAGAGGAATATATTGTGTGTG
ACCTTTTTTGTTTGGCCATGTGACTCTTTSAATAGTCATTTTTTTCCTCC
TTGAAACTTTATGTACCAAGGACCAAGGRGGAGATGCACACACCCCCTCA
CAACTTCCGACCAACACCCCCCCCCCCTTCTTCTTCTCGGAGACCAGAAT
AGACATTCGAAGCAATTATTTGAATCTTTTTATTTGTATTACNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCATTGATTTGAT
AAAAAGTATATATATATTTATTTATTTACACATATATGTACCTAAAGGTT
CTTTAGTTGGCTCCACTTAAGTTGGTGCTTGTTTTTGTTGTTCAAGGAAC
ATTCATGACCTTAGACGCGCGCGTCTTATCTGCAAAATAAAATCCTACCA
TATCAATTTAACCTTGGTAGAGAATTTGTTATGTTATTATTGTTATGGTC
CAAAGGAATAAGTAGGAATGATTCTTTCCTACAGCTGTCCTTGAAGAATA
ACAACCATCATCCGATTTGTGTTCCTTGGTCTTTTTGTTATATAATATAA
TAACAAAATAATGTATTTATTTAGGTAGGTAAGCCGTAGAGTGGTTTAAT
TTTCAACTTTTTTCGAATTTCGAGTACGTCTAGTTCGGAAAAGTTGTCAA
TTGGTAAGAATCACACCTACGCAAAATGTCATTTTACCATGGTGTCATCT
TTAGATAGCACATCTTGATCAAAGTTTGAAATGAGACAAATGTTATTTAT
TTCGTCAATAAATATTAAAATAACGTTTGCATCATTATTTTGCGTTTAGT
AATCATGATTGATACTATTCTAACCTATGCAAAACATTAATAAAGTTTTT
TTTCTAAAGCTACTCTATGGAGCAAAAAGAGAGAATAACAGAAGATATTT
CTTTTCTGAAAATTTAAAAAAAGGATACACACTAAACTCGGATCATCTTT
TTTGTTCCATAAGACAATTTAAAAAAAAAAATGTTTTAACACTTTTTATA
GGTTAAAAAAACTTTTATCATAGTTTATTCTAAAAATGCCTTCTTAGTAT
CTATATTCACTAAGTAAAGAGTTTTTGATAATTTGATCGAGATGTAATTG
AGCATAGGTCATTTTTATACCAACTGGCAACTCTTCTGTACTATTCGTAA
TWGAACTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNAAAATGTATAGATGTTATACTTTTT
GAAGGTCAAGGAATGACAAAGGGGGGAATATTTAAAAATAACAACATATT
TCACAGACATCTTCCTTCGTTATATAATGTATCATGTGTATATTTGAAAG
TACAAACGAATAACTTTTTTTCTCCTCTACAGTCTTTGGTATGCTTAAAT
GGAGACATTATACGTAAAGAAACCATTAACCAATTGGCAGCTGGTAATGC
CAAATTTTTAATGGACTCTGTTTTTGAATTGGCTCAAAGACTTAATCAAT
TCAATCTCTCAGATGCTGAGATTGGTATATTCTGTTCTGTTGTCATCATT
ACACCTGGTAATGCTCTCATTAATTCGTGTATTCACGTACTTTAATTAGC
TGATTACTTACTCTCTCTTTTTGTTTTGTTTTCTCTTATAGATCGTCCTG
GACTTAGAAATCCGGAATTGGTCCAGAAAATACAAAATAAATTAAAGAAT
ATTTTGAATAACATTCTGATTCCACAACATTCCGATAGCCCAGGAATTTT
TTCTGAACTTTTATCCATGGTTCATGATCTTCGAACTCTGAATACGCTTC
ACACTGAAAAGTTTTTAAAACAGTGCAAAATCGATAGATCCGACATGGGG
GGTTCATCTGAAGGCTCAACACTCCAGAAACATTTATTACACGGATCCAA
AGGACAACTTTATCCCCATCAACATCATTGGAATGGAGGATCCCATTCCC
AATTAGATCGAGAGTCTCTAGGAGGTGGTANNNNNNNNNNCATTCTTCTT
CTGATGCACATTCCGAACACGATCGCAGAAGTCCTATTGGCTCAGTGTCT
AGCTCTGAGTCAGGATGCTCCTCAGAAGTGTCTAGACTCACYGTGCTAGA
TTTAAAGGTCAATAATAGTGTTCTACTTAATGCTCTTTCACTTGGAAGTC
GCTTTCGACTTCCAAGTGAGGTGGCAGAGTCTGAGTTCAATAATTACCAA
CATCCTTGTCATCAAACATCATCCCCTCCCAGCAGTGGCGGCTGTAACAG
NAACACTGCCGCCAACGCTAAAAACCATATAATTAATAATAATAACGATC
ACCACTATCCCAATAATAACGCCAGCACCCACCATCAGATTCAGACCCCA
TCAAGTGCTAATCCACTAGTAGTGGCATCATCAAAATGTCCTTTTAAGAC
CTCCAAGTTGGACTCCCCCAGCGATTCTGGTATTGATTCTCCCAAGAATC
AAGGAACAAGTATATGTTCCAGCCCGCGATCATTTGTTGAAGAGGACAAA
CACTTACATAAAGATGAAGAAGAGAATGAGACTCTAGTTGTTGAATCATC
CCCTCCCCCACAGCCACAGTCTTCACATGTCTCAGAGGAACASCATCCTC
TCCTGAAAAGGGCTCTTCAACAACCACCTCAGGCGTATAATGGAGTCCCT
CCCTTAACAAGCAACGCCATTTCGTATTTCCAAGATGAAGTTTACAAACC
TCATAAAAAATTTAGACGATACAATTTAAGCAATAGCACTGCGGTACCGA
GGATTTATTTACATCATGGTGGTCCACTGGGGAATGAGGACTGTTACCCA
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