EMLSAT00000003854, EMLSAT00000003854-699701 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003854
Unique NameEMLSAT00000003854-699701
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s2096supercontigLSalAtl2s2096:20986..22223 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003854 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003854EMLSAG00000003854-686620Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000016753EMLSAE00000016753-725681Lepeophtheirus salmonisexon
EMLSAE00000016754EMLSAE00000016754-725682Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769503auto769503Lepeophtheirus salmonispolypeptide
EMLSAP00000003854EMLSAP00000003854Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003854

>EMLSAP00000003854 ID=EMLSAP00000003854|Name=EMLSAP00000003854|organism=Lepeophtheirus salmonis|type=polypeptide|length=224bp
MIVSVTTAKMTGLDLGPPPSSTNSNSGSTTSSSSSNNNNSSRQEDLLTTP
KVEPNALGGGLLSPRCNNNSRHGEDMLTTPVLTTPKTAEYWSTLGKDIPF
SPTSLVSVPPPPPRELPMDSDIGLRSPCDGLLHKRRMFKNKINSGNSVNS
DSNSCDTPGSDNSPRDLSVSSGVKEELMDKDEDSSNGASSNGGGGVGSVP
THLRRQISKPEGLNKNVSKVSAFA
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mRNA from alignment at LSalAtl2s2096:20986..22223+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003854-699701 ID=EMLSAT00000003854-699701|Name=EMLSAT00000003854|organism=Lepeophtheirus salmonis|type=mRNA|length=1238bp|location=Sequence derived from alignment at LSalAtl2s2096:20986..22223+ (Lepeophtheirus salmonis)
TATGCCTCTAGGCCTTAGGCTTTCTAAATATTAATATTTTTATTTCTCTG
TCTCAATTCCCCCCGTTCTCTCTTTCTCCTTGTCTTTAAATCTATTTACT
TATAACATGTCAGTCAGTACGCTTTTATTCGAGTCGAGTTAAGAGTCGTC
TAAAGCAAGCAAGCAAAGAAACAAGCAGTCGCATTACATTTTCGCTTCCT
TCTCTACATTTATAACTTCTTCTTCTTCTTCTGTTGTTGTTGTTGTTGTT
GTTGTAATTCTTTGCTAAAAATATAATAATATTTCAAGCAGTCATTGTTG
ATTCATCAAAGGTGAAGGGACCCCCGTAATGAAAGTGTGTTATTGAGCTG
TATATTCCTCTACCATTAAGTTAATATTTTATCTGTGTGTGTTAACTATA
TAATTAAGAATAACTTATTCTGTGTATTAATTGCCTATTAATTTGTATCT
TGCAGTTATTTGAGAATGATTGTCAAAAATCCTTGGAATCAATTAGTACT
TCTAGCACATCCAATCCTACAATTACAACGTCAGTGAAGAACTCTAATTC
TAATTACATCTCTTCAATGATTGTGTCTGTAACAACTGCGAAAATGACTG
GATTAGACTTAGGACCTCCTCCTTCGTCTACAAATTCTAACTCCGGCTCT
ACAACCTCCTCCTCTTCTTCTAATAATAATAATAGTTCAAGACAAGAAGA
CTTGTTGACAACCCCAAAAGTTGAGCCGAATGCACTTGGAGGTGGGCTGC
TCTCCCCTCGTTGTAACAATAATAGTCGTCATGGTGAGGATATGTTGACA
ACACCGGTTTTAACTACCCCTAAAACCGCAGAGTATTGGTCAACACTCGG
GAAAGACATTCCCTTCTCACCCACTTCCCTAGTCTCAGTTCCACCGCCAC
CTCCTCGAGAGCTACCCATGGACTCAGACATTGGACTTCGCTCACCTTGT
GACGGTCTTCTTCACAAAAGAAGAATGTTTAAAAATAAAATCAATTCGGG
GAATAGTGTTAATTCAGACTCTAATTCCTGTGATACCCCTGGCTCAGATA
ATAGTCCGAGAGATTTAAGTGTTTCGTCTGGAGTCAAAGAGGAATTGATG
GATAAGGATGAGGACTCGAGTAATGGAGCATCATCCAATGGGGGCGGGGG
AGTTGGGAGTGTTCCAACTCATCTTCGTCGTCAGATCTCAAAACCCGAAG
GGTTAAATAAAAATGTTAGCAAGGTTTCAGCATTCGCC
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