EMLSAT00000003892, EMLSAT00000003892-699739 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003892
Unique NameEMLSAT00000003892-699739
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s210supercontigLSalAtl2s210:432921..435820 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003892 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003892EMLSAG00000003892-686658Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000016907EMLSAE00000016907-725835Lepeophtheirus salmonisexon
EMLSAE00000016908EMLSAE00000016908-725836Lepeophtheirus salmonisexon
EMLSAE00000016909EMLSAE00000016909-725837Lepeophtheirus salmonisexon
EMLSAE00000016910EMLSAE00000016910-725838Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto777632auto777632Lepeophtheirus salmonispolypeptide
EMLSAP00000003892EMLSAP00000003892Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003892

>EMLSAP00000003892 ID=EMLSAP00000003892|Name=EMLSAP00000003892|organism=Lepeophtheirus salmonis|type=polypeptide|length=887bp
MDWGPFGRLKRTVTAAMSGYSNEFDEESSYQDGGGFQMQEQAGEEGAQLN
SGGVGGEVNTQPPPPSTTPGSLFRSEEMVLCQLFLQSEAAYACVSELGEL
GLVQFRDLNPDTNVFNRKFVNEVRRCDEMERKLRYLESEIKKDDIPMLDT
HDSPEAPQPREMIDMEATFEKLEHELQEVNQNAEALKKNYLELTELKHIL
RKTQQFFDEQDQLELGGGGGVDGQHQQLISEETGTSGLQLGFVAGVILRE
RLPAFERMLWRACRGNVFLRQAEIEDTLEDPAVGSQGVLKSVFVIFFQGD
QLKSRVKKICEGFRATLYPCPDQSADRREMAVGVMQRLEDLSAVLGQTND
HRHRVLVAAAKNVKSWFVKVRKIKAIYHTLNLFNLDVTYKCLISECWVPS
ADIDSIQLALRRGTEKSGSTIAPVFNVMITKESPPTFFRTNKFTLGFQEM
INSYGIATYQEANPAFWTVTTFPFLFAVMFGDAGHATIGLCVGLWMCLKE
KQLAARKIENEMWKIFFSGRYIITLMAMFSIYTGLIYNDFFSKSVNIFGS
SWKPTTPKEEMMSIDSEMIDPSKGGYANVPYPFGVDPVWQVSDNKIIFLN
AFKMKVSIILGVIQMTFGVVISNWNNKFFGKTMNIFAEFIPQIIFLMVLF
GYLALLIFHKWVTYFANDLEDSFTYSERCAPSILLLFINMVLNKDTAYEE
ACGTPYMFAGQGGIQQFFRIIAVICIPWMLLVKPFLVRKDYKARVAANGG
RHPEGEEPFNFVEIMILQGIHTIEYVLGSVSHTASYLRLWALSLAHAQLS
EVLWMMVLRSGFSSDQWYGGVILWFAFSFWAVITVMILILMEGLSAFLHT
LRLHWVEFMSKFYSGSGHLFLPFSFEEILQKAESSCD
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mRNA from alignment at LSalAtl2s210:432921..435820-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003892-699739 ID=EMLSAT00000003892-699739|Name=EMLSAT00000003892|organism=Lepeophtheirus salmonis|type=mRNA|length=2900bp|location=Sequence derived from alignment at LSalAtl2s210:432921..435820- (Lepeophtheirus salmonis)
ATGGATTGGGGACCCTTTGGGTAAAAAACATGATCTTTGTTCGTTGCTCA
TGGACTCTTATTAATTTCGTATCTTTTCCTTGCCTTTTCTTTGTTTTTTT
AGACGATTAAAGCGCACTGTAACTGCGGCCATGTCTGGATATTCCAACGA
ATTTGACGAAGAATCTTCCTATCAGGACGGAGGTGGCTTTCAGATGCAGG
AGCAGGCTGGMGAAGAAGGAGCTCAGCTCAACAGTGGAGGTGTGGGCGGA
GAAGTAAATACGCAGCCCCCTCCTCCTTCGACTACTCCTGGAAGTCTCTT
TCGAAGCGAGGAAATGGTTCTTTGTCAGCTATTTTTGCAAGTAAGATCCT
TGATCATACCATATGGAGTGCTACAAACTAGATTATCTTCATTTTATTAA
TTATATACATTATGTTTGTTTCCAGTCTGAAGCTGCATATGCGTGTGTCT
CGGAATTAGGAGAACTAGGACTCGTTCAGTTCAGGGATTTAAATCCAGAT
ACGAACGTATTTAATAGAAAGTTCGTTAATGAAGTCCGTAGATGTGATGA
AATGGAAAGAAAACTCAGATACTTAGAATCGGAGATAAAAAAGGATGATA
TTCCCATGCTAGATACTCATGACTCTCCTGAAGCTCCTCAGCCTAGAGAA
ATGATAGATATGGAAGCAACTTTTGAAAAATTGGAACATGAGCTTCAAGA
AGTCAATCAAAATGCTGAGGCTCTCAAGAAAAATTATTTGGAACTAACAG
AATTAAAACATATTCTAAGAAAGACGCAGCAATTCTTTGATGAGCAGGAT
CAATTAGAACTTGGAGGAGGCGGAGGTGTTGATGGTCAGCATCAACAGTT
GATCAGCGAAGAGACTGGAACTAGTGGCTTACAGCTTGGATTTGTAGCAG
GTGTAATTCTTCGTGAGAGATTACCTGCATTCGAAAGAATGTTATGGAGG
GCCTGCCGTGGAAATGTTTTTCTAAGACAAGCTGAAATCGAAGACACTTT
AGAAGATCCTGCAGTTGGCTCACAAGGGGTTCTCAAGTCTGTATTTGTTA
TATTTTTCCAAGGAGATCAGTTAAAGTCAAGAGTTAAAAAGATCTGCGAA
GGCTTTAGAGCTACTCTATATCCCTGCCCAGACCAATCTGCTGACAGAAG
AGAGATGGCAGTAGGGGTTATGCAAAGACTTGAGGATTTAAGTGCAGTCT
TGGGTCAGACCAATGATCACAGACATCGAGTTCTCGTAGCCGCAGCTAAA
AATGTCAAGAGCTGGTTTGTTAAAGTAAGAAAAATTAAAGCGATCTATCA
TACATTAAATCTCTTTAATCTTGATGTGACATACAAGTGTCTCATCTCTG
AGTGCTGGGTTCCAAGTGCAGATATTGATTCCATCCAATTGGCTCTTAGA
AGGGGTACGGAAAAGTCAGGCTCCACTATTGCTCCTGTATTCAATGTCAT
GATCACCAAGGAATCGCCTCCAACATTTTTTCGAACAAATAAATTCACTC
TGGGATTTCAAGAAATGATTAATAGTTATGGGATAGCCACCTATCAGGAG
GCAAATCCAGCATTTTGGACTGTTACAACCTTTCCATTCTTGTTTGCTGT
CATGTTTGGCGATGCTGGACATGCTACGATTGGACTATGTGTCGGACTAT
GGATGTGCTTGAAAGAAAAACAATTGGCAGCTCGTAAGATTGAAAATGAA
ATGTGGAAAATATTTTTTTCGGGGAGATACATTATCACTCTCATGGCCAT
GTTTTCCATTTACACAGGATTAATATATAATGACTTCTTCTCCAAATCTG
TGAATATTTTCGGAAGCTCATGGAAGCCAACTACACCAAAGGAAGAAATG
ATGTCCATAGACTCTGAAATGATAGATCCTTCAAAAGGTGGCTACGCAAA
TGTTCCTTATCCTTTTGGTGTAGATCCTGTCTGGCAAGTCTCGGATAACA
AGATTATTTTCCTAAATGCTTTCAAAATGAAGGTATCCATTATTTTAGGA
GTTATTCAAATGACATTTGGAGTCGTAATTTCAAATTGGAACAACAAGTT
TTTTGGGAAAACAATGAATATTTTTGCCGAGTTTATCCCACAAATTATTT
TCTTAATGGTACTCTTTGGCTATTTGGCTCTACTTATATTCCACAAATGG
GTCACTTACTTTGCAAATGACCTTGAGGATAGTTTTACTTACTCTGAGAG
ATGTGCACCAAGTATTCTTCTCCTTTTTATCAACATGGTTTTAAATAAGG
ATACTGCCTATGAAGAGGCGTGTGGGACTCCTTACATGTTTGCCGGACAA
GGTGGAATCCAACAGTTTTTTAGGATAATTGCAGTTATCTGTATACCATG
GATGTTGCTTGTTAAGCCCTTTTTAGTTCGTAAGGACTACAAGGCTCGAG
TTGCTGCGAATGGTGGMCGACATCCCGAAGGAGAAGAACCTTTCAATTTT
GTAGAAATAATGATCTTACAGGGTATTCACACGATTGAGTATGTCCTAGG
ATCCGTTTCTCACACAGCCTCCTATCTGCGTCTTTGGGCTCTTTCATTGG
CTCACGCTCAATTGTCTGAAGTATTATGGATGATGGTCCTTCGATCTGGA
TTCTCTAGTGATCAATGGTAACATAAGATAATAATGATCCCAAATATGTA
TGTCTATATTAATATTTGATCCCTTTTATCATTTAGGTATGGTGGAGTGA
TTTTGTGGTTTGCGTTTTCATTTTGGGCCGTGATCACTGTTATGATATTG
ATTTTGATGGAGGGTCTCTCCGCCTTTTTACATACACTTCGTTTACATTG
GGTTGAGTTTATGTCAAAGTTTTATTCCGGATCAGGACATTTATTTTTAC
CATTCAGTTTCGAGGAAATTTTACAAAAGGCAGAGAGTTCCTGTGACTAA
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