EMLSAT00000003976, EMLSAT00000003976-699823 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003976
Unique NameEMLSAT00000003976-699823
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s213supercontigLSalAtl2s213:19395..20797 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003976 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003976EMLSAG00000003976-686742Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000017257EMLSAE00000017257-726185Lepeophtheirus salmonisexon
EMLSAE00000017258EMLSAE00000017258-726186Lepeophtheirus salmonisexon
EMLSAE00000017259EMLSAE00000017259-726187Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769434auto769434Lepeophtheirus salmonispolypeptide
EMLSAP00000003976EMLSAP00000003976Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003976

>EMLSAP00000003976 ID=EMLSAP00000003976|Name=EMLSAP00000003976|organism=Lepeophtheirus salmonis|type=polypeptide|length=384bp
MVLSQRQREELNKAIADYMLSNGYNETLEXFKRETDSPGEIDKKFHGLLE
KKWTSVIRLQKKVNELEAKLAEAEKEYIAGAPTRDKRSPSDWIPRPPERF
SLSGHLWDFETGDYERTLKGHTDCVQDIGFDSPGKLLVSCSADMSIKIWD
FQTYECLKTLQGHDHNVSSVCFTPNGDYILSASRDKTIKMWETATGYCVR
TYTGHREWVRNVRVLHDGSLLASCSNDQSVRVWSTSTKDCKDELRDHDHV
VECISWAPESAVGPINEALTLSGEDGVKKRTGPFLASGSRDKTIKVWDVS
TGQVLFTYVGHDNWVRGLVWHPGGKYLLSASDDKTIRVWDIAHKRCHKRL
DSHSHFCTSIDFHKTYPYIVSGSVDQTIKIWECR
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mRNA from alignment at LSalAtl2s213:19395..20797-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003976-699823 ID=EMLSAT00000003976-699823|Name=EMLSAT00000003976|organism=Lepeophtheirus salmonis|type=mRNA|length=1403bp|location=Sequence derived from alignment at LSalAtl2s213:19395..20797- (Lepeophtheirus salmonis)
ATGGTGTTGTCTCAAAGACAGCGTGAGGAGCTGAACAAGGCCATTGCGGA CTACATGCTGAGCAACGGCTACAATGAAACACTGGAGMATTTCAAGAGAG AGACGGACTCTCCCGGGGAGATTGACAAGAAGTTCCACGGACTCTTGGAG AAGAAGTGGACCTCTGTGATTCGCCTTCAGAAGAAGGTGAGAGTGGGAGG GTGTGCTGGGTTTTAATTGGGAGTGTGGCCAGGGGTTAATCCTTTTTCTG CTTGTTTTCTAGGTGAATGAATTGGAAGCCAAGTTGGCGGAGGCGGAGAA GGAGTATATAGCGGGTGCCCCAACGAGGGACAAGCGTAGTCCATCTGATT GGATCCCTCGTCCTCCGGAGCGCTTTAGTCTTTCCGGACATCGTGCTCCC GTGACGCGCGTGGCATATCATCCCATTTTCTCTCTCGTGATTTCATCATC GGAAGATGCAACGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNATTAAAGTTTGGGACTTTGAAACTGGGGATTATGAGAGAACGC TTAAAGGTCACACGGATTGTGTCCAGGATATTGGATTCGACTCACCTGGA AAGTTACTGGTCTCATGTTCTGCGGATATGAGCATAAAGATTTGGGATTT TCAAACCTACGAGTGTCTGAAAACGCTCCAGGGGCATGATCATAATGTGA GCTCTGTTTGTTTTACCCCCAATGGGGATTATATCCTCTCTGCTTCCCGG GATAAAACTATAAAAATGTGGGAAACCGCCACGGGATACTGCGTTCGTAC TTATACGGGCCATAGAGAATGGGTGCGGAATGTACGGGTCCTGCACGATG GGTCCTTATTAGCAAGCTGCTCTAATGATCAGTCAGTACGTGTCTGGTCT ACATCAACCAAAGATTGTAAAGATGAATTGAGAGACCACGATCATGTTGT GGAGTGTATTTCCTGGGCTCCAGAATCGGCCGTCGGMCCAATCAACGAAG CCTTGACATTGAGTGGAGAGGATGGCGTTAAAAAACGTACAGGTCCATTT TTAGCTTCAGGCTCTCGAGACAAGACCATAAAAGTGTGGGACGTTTCGAC GGGTCAAGTGTTGTTTACCTATGTCGGACATGACAATTGGGTTAGAGGTC TCGTGTGGCATCCTGGAGGCAAATATCTTCTTTCAGCAAGTGACGACAAA ACCATCCGTGTCTGGGACATCGCTCACAAACGGTGTCATAAACGTCTGGA CTCCCATTCTCACTTTTGTACTTCAATCGATTTTCATAAAACCTATCCTT ACATTGTTAGTGGAAGTGTTGATCAAACCATCAAAATATGGGAATGCCGA TGA
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