EMLSAT00000004038, EMLSAT00000004038-699885 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000004038
Unique NameEMLSAT00000004038-699885
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s215supercontigLSalAtl2s215:568358..570270 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000004038 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000004038EMLSAG00000004038-686804Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000017519EMLSAE00000017519-726447Lepeophtheirus salmonisexon
EMLSAE00000017520EMLSAE00000017520-726448Lepeophtheirus salmonisexon
EMLSAE00000017521EMLSAE00000017521-726449Lepeophtheirus salmonisexon
EMLSAE00000017522EMLSAE00000017522-726450Lepeophtheirus salmonisexon
EMLSAE00000017523EMLSAE00000017523-726451Lepeophtheirus salmonisexon
EMLSAE00000017524EMLSAE00000017524-726452Lepeophtheirus salmonisexon
EMLSAE00000017525EMLSAE00000017525-726453Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778637auto778637Lepeophtheirus salmonispolypeptide
EMLSAP00000004038EMLSAP00000004038Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000004038

>EMLSAP00000004038 ID=EMLSAP00000004038|Name=EMLSAP00000004038|organism=Lepeophtheirus salmonis|type=polypeptide|length=330bp
MLLGSPTKKTITSRTFYFTLCLGIFCGFSFAYLFMNISSFSIEIPSAIHS
NENFLRRWMSKGKDNKSEPFEIHGNQEEFHKTQNSVADQLYKKVRILCWI
MTGPQNHDLKAIHVKATWGKRCNILLFMSSKEDPHLPAVKLDVQEGRDHL
WAKTKGAFKYVYENYYDQADWFLKADDDTYVIVENLRYLLQNYSTNDPWY
FGERFKLYIKQGYMSGGAGYILSKEALKRFVSRGIADQTGVICRVDGGDS
RDSYGRGRFFPFVPETHLIPGSIQPDNWFNKYQYYETKNGPECCSDSAIS
FHYVSPNLMYVLEYLVYHLRPYGVDSEVHS
back to top

mRNA from alignment at LSalAtl2s215:568358..570270-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000004038-699885 ID=EMLSAT00000004038-699885|Name=EMLSAT00000004038|organism=Lepeophtheirus salmonis|type=mRNA|length=1913bp|location=Sequence derived from alignment at LSalAtl2s215:568358..570270- (Lepeophtheirus salmonis)
AGGATGTTGTTGGGAAGTCCTACCAAAAAAAGTAAGGGATAATTTCTTTA ATGATGTTTTGACTTCATTCTTATGTAAAAAAATATTCTTTTAGCAATCA CATCTCGAACGTTTTATTTCACGCTATGTTTGGGGATATTTTGCGGGTTT AGTTTTGCATATCTTTTTATGAACATTTCATCCTTTTCTATCGAAATACC TTCAGCTATTCATAGCAATGAGAAGTAAGTCTACCTACATTCTCAATATA TTGTAAATAATGGCATCTTTTCAATAGTTTCCTTCGTAGATGGATGAGTA AGGGAAAAGACAATAAATCCGAACCCTTTGAAATCCATGGTAACCAGGAA GAGTTCCATAAAAGTAAGACTCTTCTACATCGTAACATATTAGAATAATT TGTTTTTATTTATTTAGCTCAAAATTCTGTTGCGGATCAATTATATAAAA AGGTTCGAATCCTTTGTTGGATAATGACTGGGCCACAAAATCATGATCTC AAAGCTATACATGTCAAAGCAACATGGGGTAAACGATGTAATATTCTTCT CTTTATGAGCAGCAAAGAGGATCCTCATTTGCCAGCAGTCAAACTCGATG TTCAAGAAGGTCGTGATCATCTATGGGCAAAGACCAAAGGAGCGTTTAAA TATGTTTATGAAAATTATTAGTGAGTAAAAATTAACACAAGTAAATAAGA TTTTTAAGCTAGGAGTATAATTAAACATCTCAATTAGTGATCAAGCGGAT TGGTTCCTCAAAGCTGATGACGATACCTACGTGATAGTTGAAAATCTGCG CTATTTACTTCAAAACTATAGTACAAATGACCCATGGTATTTTGGAGAAC GCTTTAAACTCTATATAAAACAGGGCTATATGAGCGGTGGAGCGGGTTAT ATTTTAAGCAAAGAGGCACTTAAACGCTTTGTTTCGAGAGGAATCGCTGA TCAAACAGGGGTTATTTGTAGAGTTGATGGAGGTGGAAACGAGGATGTTG AAATGGGAAAATGCATGGAGAATCTTAAGGTTGAAGCAGGTAATCTAATA TTGTCCAGACTAGTGCAGTTACCGTGATACCAATATTTTAGTATTGGTAT TTCGACACTTGTTCCACTTAATAAGAAATAAATATTGTCATTAACGGCAT CATTATGTGTAGTAGTTATTAGTATTGCATGCTTACATCATTGATGAACC ATTTTTTAACAATTATGTAATGGTGCTGCAAGGAGGGTGAAATGGAAAAG ATAAATATGTGCAGGGCCCTTATTTTTAACAATCGAGTGCAGACCCTAAG CTCCAACCCCTCCCAGTAAACAAATACAGGCTGCAAGTACCAGCTGAAAT ACTTATTTAGTTTTAAATGTCTCAGTACCTCGGGACTTCTATAGTACCGG GGTGCCGAACAACGCTAGACATAAAATCCTGCTAGTATTAAACTCTCATA AGATCATCATTTAATAATAATTCCATTACTACTATGTTGAATTAATGTTT AATGATATTTCTTCCCTTAATTTAATTGGAGTTGAAAAAACGTTTTATGA TACTAAAAAAATGTAAAACATCCTTTTACTGATGAATAATTAATTTTAGG AGATTCGCGAGATTCATATGGTAGAGGTCGATTTTTTCCTTTTGTTCCTG AGACGCATTTAATACCTGGATCTATCCAGCCTGACAATTGGTTTAATAAA TATCAATACTATGAAACTAAAAATGTGAGTTTAATTAATTATAGTTCTTG ATTCAAGTGTTTTAAATAATATTTTCTTATATTTTAGGGACCAGAATGCT GTTCAGATAGTGCCATATCCTTCCATTATGTATCGCCTAATTTAATGTAC GTTTTAGAGTATTTAGTCTATCATCTACGACCCTATGGTGTAGATTCGGA AGTCCATTCATAG
back to top
Add to Basket