EMLSAT00000004137, EMLSAT00000004137-699984 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000004137
Unique NameEMLSAT00000004137-699984
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s2199supercontigLSalAtl2s2199:2771..4248 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000004137 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000004137EMLSAG00000004137-686903Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000017926EMLSAE00000017926-726854Lepeophtheirus salmonisexon
EMLSAE00000017927EMLSAE00000017927-726855Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto768321auto768321Lepeophtheirus salmonispolypeptide
EMLSAP00000004137EMLSAP00000004137Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000004137

>EMLSAP00000004137 ID=EMLSAP00000004137|Name=EMLSAP00000004137|organism=Lepeophtheirus salmonis|type=polypeptide|length=361bp
MYPRNEAVSCAVAICDSPNNIIYHHFPKDPSRRKKWECACHRKDPLGKYP
RICEXHFEENDYKRDLKGELLGLPLKRKLKEDAIPSRGLIPGEGFEQAPR
KKKRIKIVHHFEEDSNQIYLDTLDKSSQTIVKLTQKPMVEKVNASTQACG
SLVIKVTRATNTRKDPLIQELDSLRKQNAHLHEKVKILQSENRSLKSKSN
FKEAMKGELEKTKRFTKSQCKLIMNGKKFGKWXEEDIVKGLKLKSLSSKA
YRYIQSSGLLPVPSVTTLKRWIRNFKTASGTQSNTRNIKKMLHYLVNDIE
HNNEHGEEETDTITMQHYLHVLKEEKLYKAISVPTDIDGYNNWRNEKKEK
MLLTISRLKKE
back to top

mRNA from alignment at LSalAtl2s2199:2771..4248-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000004137-699984 ID=EMLSAT00000004137-699984|Name=EMLSAT00000004137|organism=Lepeophtheirus salmonis|type=mRNA|length=1478bp|location=Sequence derived from alignment at LSalAtl2s2199:2771..4248- (Lepeophtheirus salmonis)
ATGTATCCGCGCAATGAAGCTGTCAGTTGTGCTGTTGCCATTTGTGATTC
TCCTAATAACATAATTTATCATCATTTTCCAAAGGATCCCTCAAGGAGGA
AAAAGTGGGAATGTGCTTGTCATCGAAAGGACCCCTTAGGAAAATACCCT
CGAATTTGTGAGAANCATTTTGAGGAAAATGATTATAAAAGAGATTTAAA
AGGTGAATTGCTGGGACTACCTTTAAAAAGAAAATTGAAAGAAGATGCTA
TCCCTTCCAGAGGTCTCATACCCGGAGAAGGATTTGAGCAAGCTCCAAGG
AAAAAGAAAAGAATTAAGATTGTGCACCATTTTGAAGAAGATTCTAATCA
AATATATTTGGATACATTAGACAAATCATCCCAAACCATTGTAAAATTAA
CTCAAAAACCTATGGTTGAAAAGGTTAATGCATCTACTCAAGCATGTGGA
TCCCTCGTTATAAAAGTTACTAGGGCTACTAATACCAGAAAAGATCCACT
CATTCAAGAACTCGACTCACTAAGGAAACAAAATGCACATCTACACGAAA
AAGTGAAAATCCTCCAATCGGAAAATAGATCATTAAAATCCAAATCTAAT
TTTAAGGAAGCGATGAAAGGAGAACTTGAAAAAACTAAGAGGTTTACTAA
ATCTCAATGCAAACTCATTATGAATGGGAAGAAGTTTGGAAAATGGAAKG
AGGAGGATATTGTTAAGGGACTAAAACTAAAGTCTCTTTCCTCAAAAGCC
TACCGTTACATCCAATCCAGTGGTCTACTTCCGGTTCCTAGTGTAACAAC
CCTCAAACGGTGGATCCGAAATTTTAAAACAGCTTCTGGAACACAATCAA
ATAGTATTGAAAATGTAAACAAAATACAAAACCAATCATAGTTTATGGCG
TGCCTATTAAAAGGGTAATAGAAGTCAAATATCAGTCGTAAACACGTTAT
AGACAGTATCAAGGTGTTTAGAAAAGAAGGTGGGTTTTTCTGGAACAATG
CACGAAAGAAATGAAAAGTCATGAGAAATCAATGATTGGAGTTTTATTTA
TACTTTAATATATGATTTAAGGTATTCAACAAAATTCTTATATACATTAA
TTACATTTTTACATTGACTGACATCAATATAAGTCACAGTAAAATATAAA
ACCTTGTATAAAAATTAAAAAGTATTTCACTTTTTTCGATGGATTGAATT
TTTTTACTGTATTTAGATGAGATAAATATTTTTCTAATCTTGCAGCACGA
AATATCAAAAAGATGCTTCATTATCTTGTTAATGATATCGAACACAATAA
TGAACATGGTGAAGAGGAAACGGATACTATTACTATGCAACACTATTTGC
ATGTTTTAAAGGAAGAAAAATTATATAAAGCTATATCAGTTCCAACAGAT
ATTGATGGATATAATAATTGGAGAAATGAAAAGAAAGAAAAAATGCTTTT
GACAATTAGTAGGCTTAAAAAAGAATGA
back to top
Add to Basket