EMLSAT00000004226, EMLSAT00000004226-700073 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000004226
Unique NameEMLSAT00000004226-700073
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s222supercontigLSalAtl2s222:1043554..1044146 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000004226 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000004226EMLSAG00000004226-686992Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000018328EMLSAE00000018328-727256Lepeophtheirus salmonisexon
EMLSAE00000018329EMLSAE00000018329-727257Lepeophtheirus salmonisexon
EMLSAE00000018330EMLSAE00000018330-727258Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780305auto780305Lepeophtheirus salmonispolypeptide
EMLSAP00000004226EMLSAP00000004226Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000004226

>EMLSAP00000004226 ID=EMLSAP00000004226|Name=EMLSAP00000004226|organism=Lepeophtheirus salmonis|type=polypeptide|length=157bp
MSLRDMGDVIRCPLRHCQVPTIIDIKSSFGECPACGFVFCSKCLCTYHGI
NPCKDPLEKLRELIDKTKDEESKKKLLEDSQNETLCLDLIEKISRHCPKC
LSSIQKSAGCNSMVCTKCSTRFCYICGIKLPITNPFEHYSDKKSPCANLL
HFQCLKS
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mRNA from alignment at LSalAtl2s222:1043554..1044146-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000004226-700073 ID=EMLSAT00000004226-700073|Name=EMLSAT00000004226|organism=Lepeophtheirus salmonis|type=mRNA|length=593bp|location=Sequence derived from alignment at LSalAtl2s222:1043554..1044146- (Lepeophtheirus salmonis)
ATGTCCTTACGAGATATGGGCGATGTTATTCGATGCCCTTTGCGTCATTG
TCAAGTTCCTACCATAATTGATATAAAGAGTAGCTTTGGAGAATGCCCTG
CTTGTGGATTCGTGTTCTGTAGCAAATGTTTGTGTACCTATCACGGTATT
AATCCTTGCAAGTAAGTCTTTCTAAAATGTACATTTATTGTTTTTTATTG
AATCATTCTTCAAGGGATCCTCTAGAAAAACTTCGAGAACTCATCGATAA
AACAAAAGACGAGGAGAGTAAAAAAAAGTTATTAGAGGATTCTCAAAACG
AAACTCTTTGTCTTGATTTAATAGAAAAAATATCTAGACACTGTCCTAAA
TGTCTTTCATCAATCCAAAAGTCTGCAGGATGTAACTCCATGGTTTGCAC
TAAGTAAGCCTTTTTATTTATTGATTTATCCTTTAGAAATATTCTAATTT
CATGGTAATATGTTTTTAGGTGTTCAACAAGGTTCTGCTACATTTGTGGT
ATCAAATTACCTATTACAAATCCATTTGAACACTATTCTGATAAAAAAAG
TCCGTGTGCCAATCTACTTCATTTTCAATGTTTAAAATCATAA
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