EMLSAT00000004396, EMLSAT00000004396-700243 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000004396
Unique NameEMLSAT00000004396-700243
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s230supercontigLSalAtl2s230:491269..492547 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000004396 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000004396EMLSAG00000004396-687162Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000019175EMLSAE00000019175-728103Lepeophtheirus salmonisexon
EMLSAE00000019176EMLSAE00000019176-728104Lepeophtheirus salmonisexon
EMLSAE00000019177EMLSAE00000019177-728105Lepeophtheirus salmonisexon
EMLSAE00000019178EMLSAE00000019178-728106Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778120auto778120Lepeophtheirus salmonispolypeptide
EMLSAP00000004396EMLSAP00000004396Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000004396

>EMLSAP00000004396 ID=EMLSAP00000004396|Name=EMLSAP00000004396|organism=Lepeophtheirus salmonis|type=polypeptide|length=243bp
MLRTGSRFINNYGVLMGSEGERSPKGLGGESHIKRPMNAFMVWSRGQRRK
MAAENPKMHNSEISKRLGAEWKVLTELDKRPFIDEAKRLRALHMKEHPEY
KYRPRRKPKPLIKKDLSKYHSSSYSGSTPMSXTTSSPSSSSSITITSTKA
SHHHNYQQCSNNSSNTSSPMDPPPFLLSLNPYLRRDPHHHHHHQTEKEES
QHQRRRLSCSSGKSEELDDQSGSSSSSSLSSSSTIKKPFSPYT
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mRNA from alignment at LSalAtl2s230:491269..492547+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000004396-700243 ID=EMLSAT00000004396-700243|Name=EMLSAT00000004396|organism=Lepeophtheirus salmonis|type=mRNA|length=1279bp|location=Sequence derived from alignment at LSalAtl2s230:491269..492547+ (Lepeophtheirus salmonis)
CTTTGATAGAGCGCAGAAGGTTTTTGATCCTCAAGATGCTAAGAACTGGC
AGTCGCTTTATAAATAATTATGGTGTCCTCATGGGAAGTGAGGGTGAAAG
AAGTCCTAAGGGTCTTGGAGGGGAGTCCCATATAAAAAGACCCATGAATG
CCTTTATGGTCTGGTCTCGGGGTCAAAGAAGAAAAATGGCTGCTGAGAAT
CCGAAAATGCATAACTCGGAAATATCCAAGAGACTTGGTATGATCCATTC
ATTATATTATAATGTAACAATCGACGTGAATCCTCAATTTCTATATTTAT
TTTAGGTGCTGAATGGAAGGTCTTGACGGAATTAGATAAAAGGCCCTTTA
TTGATGAGGCCAAGCGTCTTAGGTTCGTAGTATTATATGATATGTACAAA
TGAAATTATGATTTCTAATGATTTTGTTAATATTCATTCTAGGGCTCTTC
ACATGAAGGAACATCCCGAGTACAAGTATCGMCCGCGACGGAAGCCCAAG
CCTCTCATAAAGAAAGACCTCTCTAAATACCATTCCTCCTCTTACTCAGG
GAGTACTCCTATGAGTMCCACCACATCTTCCCCTTCCTCCAGTTCATCCA
TCACAATCACATCTACCAAAGCAAGTCATCATCATAATTATCAGCAATGT
TCAAACAATTCCTCCAACACTTCCTCCCCCATGGATCCACCTCCATTCCT
CCTCTCTCTGAATCCCTATCTTCGAAGGGACCCCCACCACCACCACCACC
ACCAAACAGAGAAGGAAGAATCTCAACACCAACGACGAAGACTCTCTTGT
TCATCCGGCAAATCCGAAGAGTTGGACGTTACGTCGCTAGAAAAGGACTC
TCCACCCCATAGAGAATCTCCTATTCTNCACCCGGACTCTACAACAAGTC
CACCTCCCCTAAAAGACMCTCCTGGACTCTTCGMCCCGGCAAACCCCCTC
TATCCGCATTCACATTTATTCAATTGGTATCATCCGGGNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTACTCCCCTCATATG
TTGCATCCCTTCTACCCCCGCCACCTCTTTTATTTCCACACTCCATCGTA
TCTCCTCTACAGCATAGAATCMMTCCTTTTGACATTCGATCCCTCATTCA
GGATCAATCCGGATCCTCGTCTTCTTCTTCTCTTTCCTCTTCATCCACCA
TCAAAAAACCCTTTAGTCCTTACACATGA
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