EMLSAT00000004507, EMLSAT00000004507-700354 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000004507
Unique NameEMLSAT00000004507-700354
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s235supercontigLSalAtl2s235:163315..165883 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000004507 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000004507EMLSAG00000004507-687273Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000019617EMLSAE00000019617-728545Lepeophtheirus salmonisexon
EMLSAE00000019618EMLSAE00000019618-728546Lepeophtheirus salmonisexon
EMLSAE00000019619EMLSAE00000019619-728547Lepeophtheirus salmonisexon
EMLSAE00000019620EMLSAE00000019620-728548Lepeophtheirus salmonisexon
EMLSAE00000019621EMLSAE00000019621-728549Lepeophtheirus salmonisexon
EMLSAE00000019622EMLSAE00000019622-728550Lepeophtheirus salmonisexon
EMLSAE00000019623EMLSAE00000019623-728551Lepeophtheirus salmonisexon
EMLSAE00000019624EMLSAE00000019624-728552Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto773618auto773618Lepeophtheirus salmonispolypeptide
EMLSAP00000004507EMLSAP00000004507Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000004507

>EMLSAP00000004507 ID=EMLSAP00000004507|Name=EMLSAP00000004507|organism=Lepeophtheirus salmonis|type=polypeptide|length=593bp
MLSLLRASSNYHKIGLRAISSTGKFTDSFLNSLPKDIKTHEDLYNYSIER
PDIFWGNLARDSITWMKNFQTTMDCNMKTASFKWFSDGLLNASVNCVDRH
LKNANKTALIWEKDELGEREFNCKANVIITVDEGYRGGRVIPLKEVVDEA
IKKSSQPIKHVLVAKRSGKGHVKMKSGRDVYLEDAMLQVESECHPESMSS
EDPLFYLYTSGSTGAPKGLVHSTAGYLLYTSFTHKIIFDFCEHDIFGCVA
DIGWITGHSYIVYGPLMNGGTSVLFESTPTYPDPSRYWKLVEELGITQFY
TSPTAIRQLMKYEDSYVLNSDKSSLRTLGSVGEPINIEAWNWYNDLVGRN
RCDIVDTWWQTETGGICITPRPSELNAEIVPALGMRPFLGINPVLLDDKG
NEIKENNKQGSLCLKTPWPGMARSIYDDHKRYQETYFSAFPGYYFTGDGA
YRTKEGYISIVGRIDDVINVSGHRLGTAEVEDVLTKHDNIVEAAVVGXPH
DIKGEAIYAFVVPKNLDEGVKKFEKGIQKLVKDNISGFAVPEKFQFCEDL
PKTRSGKIMRRILRKIAIGDDSFGDXSTLANPSIVDKIFKSRV
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mRNA from alignment at LSalAtl2s235:163315..165883-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000004507-700354 ID=EMLSAT00000004507-700354|Name=EMLSAT00000004507|organism=Lepeophtheirus salmonis|type=mRNA|length=2569bp|location=Sequence derived from alignment at LSalAtl2s235:163315..165883- (Lepeophtheirus salmonis)
ATGTTGTCTTTATTAAGAGCTTCATCTAATTATCACAAAATAGGACTGCG
AGCAATTAGTTCCACAGGAAAATTTACAGATAGTTTTCTCAATAGTTTAC
CCAAGGACATTAAAACTCATGAGGATCTGTATAACTATAGTATTGAACGT
GTAAGTTTATATTCGTTGAGGATTCATTTAGTTTTATTATATTAGACTTC
TAGCCTGACATATTTTGGGGGAATTTAGCAAGAGATTCTATCACTTGGAT
GAAAAATTTTCAGACTACTATGGACTGCAATATGAAAACTGCTTCCTTTA
AATGGTTTTCGGATGGATTATTGAATGCTTCAGGTAAACTTAGTTCCAAT
AAAATTATTTATTATATTATTATTTACTTTTATATAACGACTGCATAAAG
AAACATAAATATACATAATAATAATAACACATTAGTTAATAAAAACTACA
TTTTAATTTAGTTAATTGTGTTGATAGGCATTTAAAAAATGCCAACAAAA
CTGCTCTGATATGGGAAAAAGATGAGCTGGGTGAGCGAGAATTTGTGAGT
TATGCAGAATTATACAAAATGATGAATCAAATCGCTAATGTGCTCAGAGA
AAGAGGAGTTAAAAAAGGAGATGTTGTAGCGATTTATATGACTAATTCTC
CATTGGCTGKTGCCTCAATGTTAGCATGTACCAGAATTGGAGCCATTCAT
GCGGKAATATTTGCCGGATTCTCATCAGGAGCAATTGCATCGAGAATTGA
GGTGAGTATAAATACATACATATCTCGTTGATATTTAAATTCTTCACTAA
AACTACCGGAACACCGATCCGGTAAAAGAACAAAGGGATTTCTTTTAAAT
TATGAAAAATTATATTACTTTCMCCTCTGATTTAACCATATATAAACATT
AAATATAACTATCCATAGAATTGTAAAGCTAATGTTATCATAACTGTGGA
CGAAGGGTACAGAGGAGGACGGGTTATACCCTTGAAAGAAGTCGTAGATG
AGGCTATTAAAAAATCATCACAGCCTATTAAGCATGTTCTTGTGGCAAAA
CGTTCCGGTAAAGGTCATGTTAAGATGAAATCTGGTAGAGATGTCTATTT
GGAGGATGCTATGTTGCAAGTTGAAAGTGAGTGCCATCCTGAGTCCATGT
CTTCGGAGGATCCTTTGTTTTATCTTTATACTTCTGGAAGTACGGGAGCA
CCAAAGGGTTTAGTACATTCTACAGCTGGCTATCTACTTTACACTTCATT
TACTCATAAAGTAAAGTGCACCATTGTTTTGTTAATTAAATTTTATGTAT
TTTTTGATTTTATATCAGATTATATTTGATTTCTGCGAGCATGACATATT
TGGATGTGTTGCTGACATAGGTTGGATAACGGGACATAGTTATATTGTAT
ATGGTCCCCTCATGAATGGGGGAACATCTGTCCTATTTGAATCAACACCA
ACATATCCTGATCCCTCGAGGTACTGGAAATTAGTTGAAGAACTTGGTAT
CACTCAATTCTACACTTCTCCAACTGCTATACGTCAATTGATGAAATATG
AAGATAGTTATGTTCTTAATTCAGACAAATCATCACTTCGAACTCTTGGA
TCCGTAGGAGAGCCCATAAATATAGAAGCCTGGAATTGGTATAACGATTT
AGTTGGAAGAAATCGTTGTGATATTGTAGATACTTGGTGGCAAACTGAAA
CAGGCGGTATTTGCATCACACCTCGACCATCGGAATTGAACGCTGAAATA
GTTCCTGCTTTAGGCATGAGACCATTCTTAGGAATTAATCCAGTACTCTT
GGATGATAAAGTATGTTTTATAAACTTAAAAGAATCAATTTTTAAAATAT
GATGTAATGCTTAGGGAAATGAAATCAAGGAAAATAATAAACAAGGTTCA
TTATGTCTTAAAACACCTTGGCCTGGGATGGCAAGATCTATCTATGATGA
TCATAAACGTTATCAAGAAACATATTTTTCTGCTTTCCCAGGATATTATT
TTACTGGTGACGGAGCATATAGGTAAACATTTAGGTAAAAGTATTTAATT
CATGAATAGGAAAATTTTGTTTGATTTAGAACAAAAGAAGGTTACATCAG
TATTGTGGGAAGAATAGATGATGTAATCAATGTGTCCGGTCATCGACTTG
GAACAGCAGAAGTTGAGGATGTTTTGGTAATTTAATTTATAGAAACAAAT
TAGCTAGTAATAAATTTTCTTTTCTTCAAATTACCATAGACAAAACACGA
CAATATTGTGGAAGCAGCAGTCGTAGGGKATCCCCATGATATTAAAGGAG
AGGCCATTTATGCATTTGTAGTTCCCAAAAACTTGGATGAGGGAGTTAAG
AAATTTGAGAAAGGAATACAAAAGTTAGTTAAGGATAATATATCGGGATT
TGCAGTACCTGAGAAATTTCAATTTTGTGAGGATCTTCCTAAAACAAGGT
CTGGAAAAATAATGAGAAGAATACTTCGAAAAATTGCCATTGGTGATGAT
AGCTTTGGTGACWTTTCTACTTTAGCCAATCCTTCCATTGTTGACAAAAT
TTTTAAATCCCGAGTTTAA
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