EMLSAT00000004636, EMLSAT00000004636-700483 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000004636
Unique NameEMLSAT00000004636-700483
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s241supercontigLSalAtl2s241:1947..4259 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000004636 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000004636EMLSAG00000004636-687402Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000020213EMLSAE00000020213-729141Lepeophtheirus salmonisexon
EMLSAE00000020214EMLSAE00000020214-729142Lepeophtheirus salmonisexon
EMLSAE00000020215EMLSAE00000020215-729143Lepeophtheirus salmonisexon
EMLSAE00000020216EMLSAE00000020216-729144Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto768202auto768202Lepeophtheirus salmonispolypeptide
EMLSAP00000004636EMLSAP00000004636Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000004636

>EMLSAP00000004636 ID=EMLSAP00000004636|Name=EMLSAP00000004636|organism=Lepeophtheirus salmonis|type=polypeptide|length=235bp
MDASGGSKMANYSRNNNHSSELSKTPEDQQQLCLKWADYQSNLTNVFDSL
LQQEAFVDVTISTEAGKSLKCHKVVLSACSAYFQNLFVENPCQHPIVILR
DVEWRELCHIIEYMYKGQIHVGPGDLSPLLRSAESLQIRGLVDLIRPLEE
GIDSSRIGVKRRRLSNSASSKSPSSSRPFTSPKNHCSVSSGSTNLNNNNE
PISSPPISPQHSSLLRDSAAVAAVPLSSPNEEQEN
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mRNA from alignment at LSalAtl2s241:1947..4259-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000004636-700483 ID=EMLSAT00000004636-700483|Name=EMLSAT00000004636|organism=Lepeophtheirus salmonis|type=mRNA|length=2313bp|location=Sequence derived from alignment at LSalAtl2s241:1947..4259- (Lepeophtheirus salmonis)
ATGGACGCTTCAGGAGGATCCAAGTAAGTTTTTCCGCTTTTTTTTTTAGT TTTACTTTATTTTTATAATGTGTGTTTTGCCTTACTAAGATTACGAGTAT TTTCTGATATATTTTGTTACTACTATTATGCTGATAGATAAAACATATTA CTTTGTTGTTCTACATAATTAACGGAAAAAAAAATTTATCGGCAGAATGG CAAATTATAGCAGGAATAACAACCATTCAAGCGAGTTGTCCAAAACGCCA GAGGATCAACAACAGTTGTGTCTCAAATGGGCAGACTATCAATCTAATCT AACCAACGTCTTTGATTCACTACTTCAACAAGAAGCCTTTGTTGATGTGA CAATCTCCACAGAGGCTGGRAAGTCTCTCAAATGCCATAAAGTTGTTCTT TCTGCATGTTCTGCTTATTTTCAAGTAAGACACTCACTTTTTRCATATGC GTATGTTATTTTTACATCTTCTTCTTTGCACAGAATCTCTTTGTTGAGAA CCCTTGTCAACACCCAATCGTCATTCTCCGTGATGTGGAATGGAGAGAGC TCTGTCACATCATTGAATACATGTACAAAGGTCAAATCCATGTGGGTCCT GGGGACTTGAGTCCACTACTCCGCTCAGCAGAGTCTCTACAAATCCGTGG GCTTGTGGATTTAATACGTCCTCTCGAAGAGGGAATTGATAGCTCCAGGA TTGGAGTCAAGAGACGAAGACTCTCCAACTCTGCCTCGTCCAAATCACCT TCTTCTTCACGTCCCTTCACATCACCCAAAAATCATTGTTCTGTATCCAG TGGTAGTACAAATCTCAACAACAACAATGAACCCATTAGCAGTCCACCCA TATCTCCACAGCATTCTAGTCTATTAAGGGACTCTGCAGCTGTCGCAGCA GTACCTCTCAGCAGTCCAAATGAGGAACAGGGTTCCTCTTTTGGAAGGAG CGGAGCCTCTGGGGCTAATGCTGAAGATATGGTAGATGTCAAACCCGGAA TAATGGAAATGATTCAAGAGGAACAGAGGGTAAGACATATAAAGTAGGGA GGAGGTTGACAACTTTTTTTCTTATTTTGATTCGGCTAGTGCGGAAAAGT TGTTTTGTGAATTAGATATTTTTCCAGCCTTTAAAAAATATTAGTAAATG TTTTTTTTCTAAAGTTATTCTAAGGAGAATCAAAAAAGATTAGCGTAAGT GAATTTTGAGGATCCGCAATCTTTATTTTTTTTACAAAAGATCAAACCAT ATGGACAAATCTTCCATATATTATTTTCTCTCTTTGCTCCATAGGATGAC TTTGGAAATACAATTGTTTCAATATATTTGATAGGTTTTATTTAAAATAA AGGACAAAATAGCCCTTTATTTTAATTTAGCATTTTTGCTTTTTCCCCTG CTTTGACTTCAAAATTAGCAAACTAAAGATGACATGACAGAACCATGAAA TGTTGCATTAATTATTTTTCTTACCGCCATACAACTTACAAACTTTTCTG CACTAACCGTAAGCAAATTTCGATAAAGGTAAACCTCTACGAGGGTGGTC TGAAAAGTTTTCGACCTCAACGTTGTAAATAAAAGCTAGTCACATCTATC TAGCATCTGTTAGCAGATACTCATCAAAGCAYCAGCCATTTTGGAGCCAC AGTTTTTATGTAACAGTCGTTTGAGTGAGTTGATGAGAGTATTAGTGTAA AAATGGACAAAATTGAGTATCGAACTGTCATTGGATATTTGTAATCCAAA TTGGCTGKCACATCTTGTCACATCTATCTGGCATCTGTTGACAGTCACTC ACTAACGTTTCAGCCATTTCAGACCATTCTCGTATTGTACATCCAAGTTG CATATAACTATACCTTATATCTACCTATACATTTTTTAGGCAAAAATGTT GGAGGCATCGCAGCTTACGCATAATTGGATGGCAGCGGCAGCAGCRGCTG CTGCAGCATCTACTTCTACGTCACCTCAAGGTAAATAAGAGTATCATTAA TTTATATACAATATACATAATATATAATACGTATGTATGTACTTGTACTT TTCTGTTGTTTTGGTTGYGGCTTTCTACGTTCGTTNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNATTAGTATTATTACTACAAACAACATTTTTAA GATAAATACATATATGTATGTATATTGTATATACAATATTGTGCACCTCT TTTATTTGTTTTCTGTGTTGTAGGGAAACGTTTGCTTTCTCTTTTTTTCT CTTAGAAAATTAA
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