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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s241 | supercontig | LSalAtl2s241:441659..449614 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000004637 >EMLSAP00000004637 ID=EMLSAP00000004637|Name=EMLSAP00000004637|organism=Lepeophtheirus salmonis|type=polypeptide|length=2460bp
MLSAEEEHDEPMITDENEDVAKFDGKIVYNPDGSAYILEDDNLDILLPKH
DGSIIDRSGASPVDEYLPIANAFYVSKGDGNTNLYNALVKNASTDGSNAP
VVHSYRVYSARGGVDLKTRGCALSSSSKVPLSLLSVPIKPILMCFICKLS
FGCSKSFMNHGVSDHDILLTEEERSILDSKHSSAIIQTSGKNKEALVSFL
EPVNPDKSSSSGAISSPNSSSSFSKVPPPSLCNDSDPNGPASSYMRPPSV
KSHSEVDNFSSAASQLGARRTPDSERSCSGATPNEMAAAMMAXAAAAXRK
XPXGXISPAMTVPSSLSSPSPIAFPTNANMLQGTTIGACPDHVNGRPTGI
ECPKCDLILNASRMPGGIAWNTSRNSCKTLKCPKCNWHYKYQETLEIHMK
EKHPDNETTCIYCITGQQHPRLARGETYTCGYKPYRCEVCNYSTTTKGNL
SIHMQSDKHLNNMQELQNGGGSVPPSSSSAGGPLENNNSSSPNSPKVNPP
LSSPSIAVSSPQNTISSVPKPNWRCDICNYETNVARNLRIHMTSEKHTQN
VLALQQNAKNISALTHQMSNPVGGPTDPKQQLLQGFGLLAAAXASSNPDA
SAMADLAYXQALLTQLIQQQQSMGLLPNDHHVQDVMMNNEAVLPPKPEVD
PNPRYLFTCCVCNDFGSDSLEPLSAHLSSDRTKSRENEVSLVIAGNYLCQ
LCNYKTNLKANFQLHCKTDKHLQRLNHVNHIKEGGPGNEWKLRFLSNVNP
VELRCNACDFFTNSPHKLQVHVASQQHQISSXLFAHLQKSEERLNSSFGK
EGGEDLNYECLLCQFSAKGKHLLLNHVRSMKHLQMEQIHQLQKRAEGNLS
QTDIGDIFRVSDDRGSSNKLKSHHHHQHHQQQGAEELTTSSTSSVSNHHH
THNNSDHKTEKRTRNNSNNHNNNNNTKSSPTTSPSSCPLCSEKXTGQDSL
EDHASAVHSVNAEGIARLQSLINGSHWLNNENKQVKESSEEENMEVDEES
KGSHNDEGPSSSSPFQDHSNCSPSSPSDKYQDPSRPFKCDICRESFTQKN
ILLVHYNSVSHLNQLKKSSTSDTQQPLSIPTPEKSPSKGSALEALLGNIK
KDTDDEVKPYKCNICKVAYTQGSTLDIHIRSVLHQTKASKLQELILSGQI
DLSKPLIEQPDPQQIQDQHKKMLTDMLSPKSLNSTGSSNPQSSPNVRSSS
PINQSSPQSSPLATSLSQKNASSPEEHHHESANPDAIANFVKNFMPGGDG
KAVAAALSSIPDAKKASSPVLKNLLSNFGFDFMMQFNDIQQKKARIEEEE
ESEETTMSRLSPKKSSSSVEEEDKKFMTNEQNRSLDSEAFRYPCPICKKG
FLSSWSLKSHTDEAHKDIITQELLEKYIDKLRSEQNHLDEEMPVETAPKE
HSSISREDXSPQSPSVRXSXPHATPQQPPNLLEMQEVIQRAMMQQMNPMM
MQMAQLQGLNPLAAMNLYPPLIPPGLLPGSQNMHGGMLDPKVLALMAXGS
NKSPEELKNLNPHAAFMQMLAQQQQQQQQTASSLAGNNKMPQIPPMEPFS
FPPTPPDAHHLPKQSASLSNQSQQPAPVTTPSQETGGKRARTRISDDQLK
ILRSHFDINNSPAEETLNLMSSQTGLPLKVIKHWFRNTLFKERQKNKDSP
YNFSNPPSTKLNLEEYEKSGETKITPLKPEEQGEYIQNELKKEVEPEVTK
NEAKIARASSPESNISDSNHSKTDIPSDSNGSSNLTLSRLLAAGGSPLPP
NLLPNFPAFPTNPAAMPNYLSNLANRMSQEMNNSVPRPHSPQQSCGGSQT
NSSGKRANRTRFTDYQIKVLQEFFENNAYPKDDDLEYLSKLLGLSPRVIV
VWFQNARQKARKIYENQPAGNECSPVAXNTSSSSVSGAVGATVAXXSNNN
ADSXSEQNNAGRFTRTPGLNYQCKKCLLVFQRYYELIRHQKQHCYKEEDA
KRSAQAQKAAGVAAAQYVGQYNSNNSEDSNHSNDRSVHSPLVNEEDLVRQ
YVGNNPFLSGAFQQQSQHQQQSQALNQQQTSNHHSGHDEEIDEDMENESD
ENSLCSTPSSSKRKLSDDGTELDAEELQNREKRLRTTITQEQLDFLYQKY
QSESNPSRKSLEQIAGQVGLRKRVVQVWFQNTRARERKGLYIKPELNHDE
NFLMKCPMCPNVSPFKSRLSWESHIGTYHPDLMENDDVVVPDSIASLIPN
SASAYNLQSSMRKYYEDTMKRFMNDMQENNKEQGVGVAVGGGAVGALDLT
SSDMETLSDHILDEDRDPNGDSSSQYGGNKRFRTQMTGLQIKMMKAIFEN
YKTPSMSECHGLGKEIGLQKRVVQVWFQNARAKEKRAKLQYSQSNGGIEP
PQESVPPVPDECHICSYKYGSHXSVQDHIFSKSHLDKLRTALEAGLYEPE
SPGQIITGGVVAAGGNTNVSSGGNTPLGGGGGEPLQMLQINNRDLLDMTS
RSNNRMMMQV back to topmRNA from alignment at LSalAtl2s241:441659..449614+ Legend: polypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000004637-700484 ID=EMLSAT00000004637-700484|Name=EMLSAT00000004637|organism=Lepeophtheirus salmonis|type=mRNA|length=7956bp|location=Sequence derived from alignment at LSalAtl2s241:441659..449614+ (Lepeophtheirus salmonis)
ATGTTGTCTGCTGAAGAAGAGCATGATGAGCCCATGATCACGGATGAAAA
TGAGGATGTTGCTAAATTTGACGGAAAGATTGTTTATAATCCAGATGGAT
CCGCTTATATTCTAGAAGATGATAATTTGGATATTCTTCTGCCTAAACAT
GATGGGTCTATTATTGATCGATCTGGAGCTTCCCCCGTGGATGAGTATCT
TCCCATTGCAAATGCCTTCTATGTCTCAAAAGGAGATGGGAACACAAATC
TATATAATGCGCTGGTGAAGAATGCATCCACCGATGGATCCAATGCTCCA
GTGGTTCACTCTTACCGGGTCTACTCTGCACGAGGAGGAGTTGATCTCAA
GACTAGAGGATGTGCCCTTTCATCATCGTCCAAGGTACCCTTGAGTCTTT
TGTCAGTGCCCATCAAACCAATTTTGATGTGCTTCATTTGTAAGTTGTCT
TTTGGATGCTCCAAATCATTCATGAATCACGGTGTATCAGATCATGATAT
TCTTCTAACTGAGGAAGAGCGCTCCATTCTGGACTCTAAACATTCTTCTG
CAATCATTCAGACTTCAGGGAAGAACAAGGAAGCCCTTGTCTCCTTCTTG
GAACCAGTCAATCCAGATAAATCATCCTCCTCCGGTGCCATATCATCACC
CAATTCGTCCTCTTCCTTCTCAAAAGTTCCTCCACCATCATTGTGTAATG
ATTCAGATCCCAATGGCCCCGCCTCCTCCTATATGAGGCCTCCGTCAGTT
AAAAGTCACTCTGAAGTGGATAACTTTTCTTCAGCCGCATCCCAGCTTGG
AGCTAGACGAACTCCAGACTCAGAGAGAAGCTGTTCAGGGGCAACACCCA
ATGAAATGGCTGCAGCAATGATGGCTSCCGCCGCTGCGGCAYCGCGAAAA
AKYCCAYCCGGGAGKATATCYCCTGCCATGACAGTACCTTCTTCCCTCAG
CTCACCTTCTCCTATTGCATTTCCAACAAATGCAAATATGCTTCAGGGCA
CAACGATAGGAGCTTGTCCGGACCACGTAAATGGTAGACCCACGGGCATT
GAATGTCCAAAATGTGATCTCATCCTCAATGCCTCTCGAATGCCAGGAGG
CATTGCATGGAACACTTCAAGAAACTCTTGTAAAACCCTCAAATGCCCCA
AATGCAACTGGCACTACAAATATCAAGAAACCTTAGAAATCCACATGAAA
GAAAAGCATCCAGATAACGAAACCACTTGCATTTATTGCATCACTGGTCA
ACAACACCCTCGACTTGCACGAGGAGAAACTTACACCTGCGGCTATAAAC
CCTATCGATGCGAGGTATGCAACTATTCTACTACAACCAAAGGAAATCTC
TCCATTCACATGCAGTCTGATAAACATTTGAACAACATGCAGGAACTCCA
AAATGGAGGTGGATCTGTTCCACCTTCTTCCTCATCTGCTGGAGGACCAC
TTGAAAATAATAACAGCAGTAGCCCAAACAGCCCCAAAGTCAATCCTCCT
CTTTCCTCACCCTCCATTGCCGTTTCTTCCCCTCAAAACACGATATCCTC
GGTGCCGAAACCGAATTGGCGATGTGATATTTGTAATTACGAAACGAATG
TAGCCCGTAATCTAAGGATCCACATGACGAGCGAGAAACACACTCAAAAT
GTACTTGCTCTTCAACAAAACGCCAAGAACATTTCTGCTCTCACTCACCA
AATGAGTAATCCAGTAGGAGGTCCCACAGACCCGAAACAACAATTACTTC
AAGGGTTTGGACTTTTAGCTGCTGCASCAGCCTCTTCAAATCCAGATGCT
TCTGCCATGGCGGATCTTGCTTACMATCAAGCTCTATTGACTCAGCTGAT
TCAACAGCAACAATCCATGGGTCTTCTTCCAAATGATCATCATGTTCAAG
ATGTTATGATGAACAATGAGGCTGTTCTTCCACCGAAGCCAGAAGTCGAT
CCCAATCCACGTTACCTCTTTACTTGTTGTGTTTGTAATGACTTTGGTTC
TGATTCCCTGGAGCCACTTTCGGCTCATTTATCGTCGGATCGGACCAAGT
CTCGTGAAAATGAAGTCAGTCTTGTGATTGCGGGGAATTACCTCTGTCAA
CTCTGCAATTACAAAACGAACCTCAAAGCCAATTTCCAATTACACTGCAA
GACTGATAAGCATCTTCAAAGACTCAACCATGTCAATCACATAAAGGAAG
GGGGTCCTGGAAACGAATGGAAGCTACGATTCCTAAGTAATGTGAACCCT
GTCGAGCTACGCTGTAATGCCTGTGATTTCTTTACCAATAGTCCACATAA
ATTGCAAGTTCATGTTGCATCTCAACAACATCAAATATCATCCRTTCTCT
TCGCACATCTCCAAAAGTCCGAAGAGAGGCTCAACTCATCCTTTGGGAAA
GAGGGTGGGGAGGACCTCAATTACGAATGTCTTCTATGTCAATTCTCTGC
CAAGGGGAAACATCTACTCCTCAATCACGTGAGGAGCATGAAACATCTTC
AAATGGAGCAAATTCATCAGTTACAAAAAAGAGCAGAAGGGAATTTGAGC
CAAACGGATATTGGGGACATTTTTAGAGTATCGGATGATAGGGGKAGCAG
CAATAAGCTGAAATCTCACCACCACCACCAACATCATCAACAACAAGGAG
CCGAGGAGCTTACCACTTCTTCAACTTCTTCAGTTTCCAATCATCATCAT
ACACACAATAATTCTGGTAAAATCATTAAATCATACAATACTAATAATAA
TAGATATAACGAATTTTCTATTCATTTCACATTCCTTTTTTGTTCTTTTC
TTTTCTCATATTCTTTATTTTTTTAAAAACATTATTAATTTTGCTATTCA
AATTAATGAATACATTTTTTTGCCAAAAAATACGGGGAAAAAAAAAAAAG
AAAGATCAGGKGTTGGTTTTAAATATTTCTTTTGTAATAAAGTACCCCTC
CATCAGTTTCTATTCTTAAAAACAAAAAAGAGTTATAACAGCAAGAACAA
CAACAAAATTATCTTTTCTTTTTTCTAATATTGTAAACCATGAGGTGGTA
CAGAATCCTTCAGATTCGTATGAAAGGATCATTATTCCCGTTTTCCTGTT
ATTATGACCATTTTTTTTCCTGTTATTTTTAAATTGAATGTTTTTGGGAT
CATTTATTCTTTTCAACTCCTTCAAGGAACAAACTAAAAACAATCTCTAA
TTCACCTCTCTCTATTTCTCCACAGATCATAAGACTGAGAAAAGGACTAG
GAATAATAGTAATAATCATAACAATAATAATAACACTAAAAGCAGTCCAA
CCACATCACCTTCGTCTTGTCCACTTTGTTCGGAAAAGTYCACGGGACAA
GACTCTTTGGAAGATCATGCATCCGCTGTACATTCCGTCAATGCTGAAGG
AATTGCTCGCCTTCAATCCTTGATCAACGGATCTCATTGGCTAAACAACG
AGAGTAAGTTGCATTAATATTTTCTTGTTTGTCTGGACTTATTGTATTAC
TTTATATGTTTATACAGATAAGCAAGTGAAGGAATCATCCGAAGAAGAAA
ATATGGAAGTGGATGAAGAGTCCAAAGGCTCTCACAATGATGAGGGTCCT
TCCTCATCTTCTCCATTTCAGGATCATTCTAATTGCTCTCCTAGCTCACC
TTCTGATAAATACCAGGATCCTAGCAGGCCCTTTAAATGTGATATCTGTC
GTGAGAGTTTCACTCAAAAGAACATTTTACTTGTTCATTACAATTCAGTG
AGTCATTTGAATCAATTAAAGAAATCATCTACCTCGGATACACAACAGCC
TCTCAGTATTCCTACTCCTGAAAAAAGTCCAAGTAAAGGCTCTGCTCTTG
AAGCTCTTCTTGGAAACATCAAAAAGGATACGGATGATGAGGTCAAGCCT
TATAAATGTAACATTTGTAAAGTGGCTTATACCCAGGGCTCTACACTGGA
TATCCACATTCGCTCTGTTCTTCACCAAACCAAGGCATCCAAGTTGCAAG
AACTGATTCTGAGTGGGCAAATTGATTTGAGTAAGCCACTAATAGAACAG
CCAGATCCTCAACAAATTCAAGATCAACATAAAAAGATGCTTACAGATAT
GCTGAGTCCTAAGAGCCTTAATTCAACAGGGAGCTCTAATCCTCAGTCTT
CTCCTAACGTTAGAAGCTCTTCGCCCATTAATCAATCCTCGCCTCAGAGC
TCACCACTTGCAACCTCACTCTCACAGAAGAATGCTTCTTCTCCTGAAGA
ACACCATCACGAGTCTGCTAATCCAGATGCCATTGCTAATTTTGTTAAAA
ACTTTATGCCTGGAGGGGATGGAAAAGCTGTTGCTGCGGCTCTGAGCTCA
ATTCCTGACGCTAAAAAAGCATCCTCACCTGTCTTAAAAAATCTCTTGTC
CAACTTTGGATTTGACTTTATGATGCAATTCAATGATATTCAGCAAAAAA
AGGCTCGTATAGAAGAAGAGGAAGAAAGTGAAGAGACGACAATGTCTCGA
CTTTCTCCTAAGAAATCATCCTCCTCTGTTGAAGAGGAGGACAAAAAGTT
TATGACCAACGAACAGAATAGATCCTTAGATTCTGAAGCTTTTAGGTATC
CTTGTCCAATATGTAAGAAGGGTTTCTTGAGCTCTTGGTCCCTAAAGAGT
CATACTGATGAGGCTCACAAAGACATTATTACTCAAGAGCTCCTCGAAAA
GTATATCGATAAACTGAGATCCGAGCAAAACCATTTAGATGAGGAAATGC
CAGTTGAGACAGCACCAAAGGAGCATTCCTCCATCTCTCGAGAAGACAMC
TCTCCTCAATCACCATCAGTTCGAYCCTCAMCTCCACATGCTACTCCACA
ACAGCCTCCAAACCTACTTGAAATGCAGGAAGTGATTCAAAGAGCAATGA
TGCAACAGATGAATCCCATGATGATGCAAATGGCCCAGCTCCAAGGACTC
AATCCTCTTGCAGCAATGAATCTTTATCCTCCTCTCATTCCTCCTGGACT
CCTTCCAGGCTCTCAGAACATGCATGGAGGGATGTTGGATCCAAAAGTTC
TGGCCCTTATGGCTGSCGGCTCTAATAAAAGCCCCGAAGAGCTAAAGAAT
CTTAATCCCCATGCTGCATTCATGCAAATGCTAGCTCAGCAGCAACAACA
GCAACAGCAAACAGCATCTTCTTTGGCCGGGAACAATAAGATGCCTCAAA
TMCCTCCAATGGAACCATTCAGTTTCCCTCCCACTCCACCTGATGCTCAT
CATCTTCCAAAACAATCTGCATCTCTTTCCAATCAGTCCCAACAACCTGC
TCCTGTTACAACGCCGAGTCAAGAAACAGGAGGTAAACGAGCTAGAACAC
GGATTTCAGATGATCAGCTGAAAATCCTCCGATCTCACTTCGATATTAAC
AATTCTCCAGCTGAAGAAACCTTGAATTTAATGTCATCTCAAACTGGACT
TCCACTCAAAGTAATCAAACATTGGTTTAGAAACACTCTTTTTAAAGAAA
GACAAAAAAACAAGGATTCTCCCTACAACTTCTCGAATCCTCCCTCAACA
AAACTCAATCTTGAAGAGTATGAAAAATCTGGGGAAACAAAAATAACTCC
TCTGAAGCCAGAGGAACAGGGTGAATACATTCAAAATGAATTGAAAAAAG
AGGTTGAGCCTGAAGTAACAAAGAATGAAGCTAAAATTGCACGAGCATCC
AGCCCTGAGTCTAATATATCCGACTCAAATCATAGCAAAACAGATATTCC
TTCTGATAGTAATGGAAGCAGTAATTTAACTCTTTCGCGTCTTCTAGCTG
CTGGGGGKTCACCACTACCCCCGAATCTTCTTCCAAATTTTCCAGCTTTT
CCAACGAATCCTGCAGCTATGCCAAATTATTTAAGCAATTTGGCAAACCG
GATGTCACAAGAAATGAATAATAGTGTTCCCCGTCCTCATAGTCCTCAAC
AATCATGTGGAGGCTCTCAAACTAATTCAAGTGGTAAGCGTGCAAACAGA
ACTCGTTTCACAGACTATCAAATCAAGGTTCTTCAAGAGTTCTTTGAAAA
YAATGCCTATCCTAAAGATGATGACCTCGAGTATTTATCCAAATTACTGG
GACTGAGTCCTAGAGTAATTGTTGTATGGTTTCAAAATGCACGTCAAAAA
GCAAGAAAAATCTATGAAAATCAACCGGCGGGAAACGAGTGTAGCCCCGT
TGCGAGKAATACCTCTTCCTCTTCCGTATCGGGGGCCGTAGGTGCAACGG
TGGCGGKGRTGAGCAACAATAATGCCGATTCGGRCTCTGAACAAAACAAT
GCCGGGAGGTTTACACGAACCCCTGGTCTCAATTACCAGTGCAAAAAATG
TTTACTTGTATTCCAAAGATACTATGAATTGATACGTCATCAAAAGCAAC
ACTGTTATAAAGAAGAAGATGCAAAAAGATCAGCCCAAGCTCAGAAGGCT
GCTGGCGTAGCTGCAGCTCAGTATGTTGGACAGTATAATTCCAATAATTC
TGAAGATTCCAATCATTCCAATGATAGAAGCGTTCATTCTCCTCTAGTAA
ACGAGGAGGATTTAGTCAGACAATATGTGGGAAACAATCCCTTTCTGAGT
GGGGCTTTTCAACAGCAATCCCAGCACCAGCAGCAATCCCAAGCTCTCAA
TCAACAACAAACAAGTAATCATCATTCAGGCCATGATGAAGAAATCGACG
AGGACATGGAAAATGAGTCTGATGAAAATAGTCTTTGCTCTACGCCTTCT
TCCTCCAAGAGGAAATTGTCAGACGATGGAACAGAATTAGACGCTGAAGA
GCTTCAAAATCGTGAAAAACGTCTAAGAACGACCATTACTCAAGAGCAAT
TAGATTTTTTATACCAAAAATATCAGAGTGAGAGTAATCCAAGTCGAAAA
AGTCTGGAACAGATTGCTGGTCAAGTTGGGCTCCGAAAGAGAGTTGTTCA
AGTTTGGTTTCAAAATACTCGAGCACGAGAGAGAAAGGGTCTTTATATCA
AACCCGAACTGAATCATGATGAAAACTTCCTCATGAAATGCCCTATGTGT
CCTAATGTATCACCTTTCAAATCGCGACTGTCTTGGGAGAGTCATATCGG
AACTTATCATCCAGATCTTATGGAGAATGATGACGTAGTTGTACCAGATT
CCATAGCCTCACTCATTCCTAATTCAGCCTCTGCCTACAATCTTCAAAGT
TCAATGCGTAAGTATTACGAGGACACGATGAAACGATTCATGAATGACAT
GCAAGAGAATAACAAGGAACAAGGGGTTGGAGTTGCTGTTGGAGGAGGTG
CAGTAGGAGCTCTGGATTTGACATCCTCAGACATGGAAACTCTCTCAGAT
CACATCTTAGATGAAGATCGTGATCCTAATGGAGACTCATCCTCTCAATA
CGGTGGAAACAAGCGATTCCGTACACAAATGACCGGCCTTCAAATCAAAA
TGATGAAGGCCATATTTGAGAACTACAAGACCCCAAGTATGTCCGAGTGC
CATGGCTTGGGCAAGGAAATTGGACTTCAAAAACGCGTTGTTCAAGTTTG
GTTTCAAAACGCAAGAGCCAAAGAGAAGAGAGCTAAACTTCAGTATTCCC
AATCCAATGGTGGAATCGAACCCCCTCAAGAGTCTGTCCCTCCTGTTCCA
GATGAGTGCCATATTTGCTCTTACAAATACGGCTCSCACYATAGCGTGCA
AGACCATATCTTTTCTAAATCTCATTTGGATAAATTACGAACTGCTCTGG
AGGCAGGGCTCTATGAGCCAGAATCTCCTGGACAAATCATAACAGGAGGT
GTCGTTGCTGCAGGAGGAAATACTAATGTGTCTTCAGGAGGAAATACTCC
ACTGGGCGGTGGTGGAGGAGAACCTCTACAAATGCTTCAAATAAATAATA
GAGATTTGCTAGACATGACTTCAAGGTCAAATAACCGAATGATGATGCAA
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