EMLSAT00000004641, EMLSAT00000004641-700488 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000004641
Unique NameEMLSAT00000004641-700488
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments
Table of all RNA interference experiments conducted using this feature, grouped by Phenotype CV: -Missing-
Gallery Image Title Gene or target symbol Sex/Stage Phenotype Datesort descending
RNAi_AH 4641 female
  1. PreAdult2
-Missing-
-Missing-
08.11.2016 - 09:40
13.12.2016 - 09:40
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s2426supercontigLSalAtl2s2426:5738..7142 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000004641 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000004641EMLSAG00000004641-687407Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000020233EMLSAE00000020233-729161Lepeophtheirus salmonisexon
EMLSAE00000020234EMLSAE00000020234-729162Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto768589auto768589Lepeophtheirus salmonispolypeptide
EMLSAP00000004641EMLSAP00000004641Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000004641

>EMLSAP00000004641 ID=EMLSAP00000004641|Name=EMLSAP00000004641|organism=Lepeophtheirus salmonis|type=polypeptide|length=137bp
MEAFMGKYNRISSEKYEDLLKELGVNVLLRKAALVSTPSFEVSKEGEVWS
FKTSTVAKSMELKFEXGKKFEETTSDGRTVDTLVTLDGPTTFVSEQMAKK
DGQKSTKTVRDFKEGKCTQITEVVGSDVKCTQVFEKA
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mRNA from alignment at LSalAtl2s2426:5738..7142+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000004641-700488 ID=EMLSAT00000004641-700488|Name=EMLSAT00000004641|organism=Lepeophtheirus salmonis|type=mRNA|length=1405bp|location=Sequence derived from alignment at LSalAtl2s2426:5738..7142+ (Lepeophtheirus salmonis)
CTCAACGTGGAGAAAAGGGGGAGCTTGCTAGCTAGGTAGAGAAAGAGAGA AAAAAAAGCATGTCCGCTTTTTTTGCTTTTTTTAAACAACGCTTTATAAA TTGTTTAAATTAACTAACCGGCTCTTACTACACGTCTGAGTTCCGAGTCG AGAAGTCCAACATTTAAGAACATACATTCAAACTCAAATCTATTTTCACA ATGGAAGCTTTCATGGGCAAATACAACCGAATTTCCTCCGAAAAATACGA GGACCTCTTGAAGGAGCTTGGTGTAAATGTTTTACTTCGTAAAGCCGCCC TTGTGTCGACACCTAGCTTTGAGGTAATTGCGCAGTGGTTGGGKCGTCAG TCTGGCTGCCCCTCCTTTCCATAGCGTCTTCTTTATTTTGTGCCATGTGT TCAATTAATTTTTCCTTACACTTGTGTTCTACATATTTGATATTGTATGT TTGCTTAATAAATAGGTCTCTAAGGAGGGCGAAGTGTGGTCTTTCAAAAC TTCTACGGTAGCCAAGTCAATGGAATTGAAATTCGAAGMCGGAAAGAAGT TCGAGGAAACTACCTCTGACGGTCGTACAGTGGACACCCTCGTCACGTTG GACGGGCCCACAACTTTTGTCTCTGAGCAAATGGCCAAAAAGGATGGACA AAAGAGTACCAAGACTGTACGTGACTTCAAGGAGGGGAAATGTACGCAAA TCACTGAGGTCGTTGGATCTGATGTTAAATGCACTCAAGTCTTTGAAAAA GCATAAATCAATGAGGAAGATAACAATTAACTTATAATAATGAAGTCACA AAAGTTATTTTAATTTTTTAATTTTTTCTTATGATCTAGTGATGTATTTA AATTCTTGTTAAATTATTGTAACGTTATCTAGTTGCGTACATGGGGTGTG TTAGCTAGTTTATGCATTAAAAGTACACTGCCCGACTGAAATACATAGTG GTTTCATTTTCTCTTCTTGGAAGTGTTTTTGCTCTCAATATGTAGAGTGT CTTAGTTAGATTTCTGTTATAATCAGTTCAGGTAAATAATCTATTACTGG AGCTATCATAGTTCTGTCAACCTAAAATGAAATGGTTAATGTTCATTAAT TAAAGAAACCTACGTGGAAATGAAATAGCACTATAATCATGGGAAATAGT AATATAAATTATATGAATCTGACTGTAAGGGAAAATAATACTTTAATTAG GCTTAAGTCATAGTATTGAGTCCAATGATATGCTTCTAGTGTAATTACAA GGATTCACTTAAAGACAGCTTGTTTTTATATGTCTGTACAATATTTAACC ATTCTCTTTTAGTTGTCTATATTATGAGTTATGATAGTAAAACGTAATTG AAGTATTTATCTTGCGTACATTACACAACAAAAACCTTTTTGTAACAGCG TATAA
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