EMLSAT00000004742, EMLSAT00000004742-700589 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000004742
Unique NameEMLSAT00000004742-700589
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s24supercontigLSalAtl2s24:1336525..1337912 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000004742 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000004742EMLSAG00000004742-687508Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000020745EMLSAE00000020745-729673Lepeophtheirus salmonisexon
EMLSAE00000020746EMLSAE00000020746-729674Lepeophtheirus salmonisexon
EMLSAE00000020747EMLSAE00000020747-729675Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780661auto780661Lepeophtheirus salmonispolypeptide
EMLSAP00000004742EMLSAP00000004742Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000004742

>EMLSAP00000004742 ID=EMLSAP00000004742|Name=EMLSAP00000004742|organism=Lepeophtheirus salmonis|type=polypeptide|length=316bp
MYYKVISLLVLTALFRTSMGDELSPSLPPTLSATYEAHEGVYPSAPPKYN
YNYEVADSYKGLNFGQNEERDNSATLGEYHVQLPDGRRQVVKYAIKDAYS
GYLAEVSYEGEAHYDPPSKYTTYKAVVPTETIKAPAPKTNTYKPTPKPIV
YKPLSGQSNPXIVYKPIPPVPANNVVFNKPLPPPSVSSQSGPINTIVYKP
LPPSGPEPINYKPLPSNGSSKSASAPLPTSGEIYYKPLPPVSAKSSSPII
VNNNGPSSPVQDFSQSAPVQVFDSSTSSSSLSSYTPKPVVIVSSTSTPFV
STTPLPFSSSTNNYSS
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mRNA from alignment at LSalAtl2s24:1336525..1337912+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000004742-700589 ID=EMLSAT00000004742-700589|Name=EMLSAT00000004742|organism=Lepeophtheirus salmonis|type=mRNA|length=1388bp|location=Sequence derived from alignment at LSalAtl2s24:1336525..1337912+ (Lepeophtheirus salmonis)
TTTTATTTCTATTTAGGCGTGGCTAATCCTCCCGTCATCAATCGGATAAA
CATCAATATCATCATAATTCTTCCATATCCACGCCGCTTCCATTAATTGG
CAACAATCCACACACTCTATGCTTAGATGTACATATATAAAAGGGCTTAT
GTTCCTTTGTAGAGACATCAGTCATAATTTTGTCTCTACAGCATGTATTA
TAAGGTAACTTAGGATTTGTAGAGAATTTGATCCAATGTTGGTCAAAGAA
ACTGATATATTTTTTTATTTTCTAGGTTATCTCACTTTTAGTTCTCACAG
CCCTATTCCGTACTTCTATGGGTGATGAGTTGTCCCCGTCATTACCACCC
ACTCTTTCAGCTACATATGAAGCCCATGAGGGGGTTTATCCCAGTGCTCC
TCCAAAATATAACTACAACTATGAAGTTGCGGATTCATACAAGGGACTCA
ACTTTGGGCAAAACGAAGAGCGGGATAACTCTGCCACATTAGGAGAGTAT
CATGTTCAACTACCAGATGGAAGACGCCAAGTTGTCAAATATGCCATTAA
GGATGCCTATTCTGGTTACCTTGCTGAAGTATCTTACGAAGGAGAGGCTC
ACTACGACCCTCCTTCCAAATATACAACTTATAAGGCCGTTGTTCCAACA
GAAACAATTAAGGCTCCAGCTCCTAAGACTAACACTTACAAGCCAACACC
TAAGCCTATTGTTTACAAACCACTATCAGGACAATCTAATCCTGTGCCCC
CTCCRCCASCATCCTCTATCAAGACCATAGTCTACGAACCTCTTCCAAAC
TCTGGGCCTTCAAAGACTGATGTCCTTCTTCCARCAGCACCAGTAGCAGA
CAATAATATTGTCTTTAGCGAGCCTCTTCCTCCTCCAAGTTTCRCCTCCC
AATCTGTKCCCTCAAAGKCCATCGTCTACAAACCTATACCACCAGTACCA
GCAAATAATGTCGTGTTCAACAAACCCCTTCCTCCTCCAAGTGTATCCTC
CCAATCAGGACCCATAAATACTATTGTCTACAAACCTTTGCCCCCATCAG
GCCCAGAGCCCATTAACTACAAGCCTCTTCCTTCTAATGGATCATCAAAA
TCAGCATCTGCTCCTCTCCCAACTTCTGGAGAAATCTACTATAAGCCTCT
CCCTCCAGTATCTGCCAAGTCATCTTCTCCAATCATCGTTAACAACAATG
GACCTTCGTCTCCAGTACAGGACTTTTCTCAATCCGCTCCTGTTCAAGTC
TTTGATTCGTCCACTTCTTCTTCTTCTTTATCGTCTTATACTCCAAAGCC
AGTCGTGATTGTGAGCTCTACTTCTACACCATTTGTCTCCACAACCCCTC
TGCCCTTCTCTTCATCAACCAACAACTACTCTAGCTAA
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