EMLSAT00000004798, EMLSAT00000004798-700645 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000004798
Unique NameEMLSAT00000004798-700645
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s253supercontigLSalAtl2s253:442774..444279 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000004798 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000004798EMLSAG00000004798-687564Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000021007EMLSAE00000021007-729935Lepeophtheirus salmonisexon
EMLSAE00000021008EMLSAE00000021008-729936Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto777727auto777727Lepeophtheirus salmonispolypeptide
EMLSAP00000004798EMLSAP00000004798Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000004798

>EMLSAP00000004798 ID=EMLSAP00000004798|Name=EMLSAP00000004798|organism=Lepeophtheirus salmonis|type=polypeptide|length=465bp
MDVLNEEYLLQWKSHNTEIIQEFHRLYKDDRFTDCTIAAEDETFRAHKLI
LSGCSPYFKSLFEKTSCSSPVIVLKDISAEHVGLLIRYMYLGVISVKRED
LTTILRTANSLRIRGLTTDMSEESAVAHQLDGQTATIHPTAPPSPPLVKE
GRKGYVPKKLRAHPSSSAGGGGDNDSIVSSPRASSSEGPVEPEPSGVSPD
NGSDSPEGSKGGSVDEEQPWNLSQGKESGITIGKAKFPILGNYLKNGNSA
QINGGNASKKIRTGSIDELLETIRMNNGNHHHINNNTISSNNNEQRNSEE
ITSNSSPVMSSQSLAQSWLDQLSLVKEEHHKSNKENPGSNSTITNSIAQL
NNNTNGDTPPPPSFTSSPVPRSSGDLGEIGPNGKPSVTCEVCGKKLADPS
SLYRHRKIHSGDKPHKCPFCSRRFIQRYNMKQHMKTHRIDRIDNPELAXA
IAAGDYSIPRKAKNI
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mRNA from alignment at LSalAtl2s253:442774..444279+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000004798-700645 ID=EMLSAT00000004798-700645|Name=EMLSAT00000004798|organism=Lepeophtheirus salmonis|type=mRNA|length=1506bp|location=Sequence derived from alignment at LSalAtl2s253:442774..444279+ (Lepeophtheirus salmonis)
ATGGATGTATTGAATGAGGAGTATCTCCTTCAGTGGAAGTCCCATAACAC GGAAATAATTCAAGAGTTCCATCGTCTCTACAAGGATGATCGCTTCACGG ATTGTACCATCGCAGCAGAGGATGAAACCTTTCGCGCTCATAAGCTCATC CTCTCTGGATGCAGCCCTTACTTCAAAAGTCTATTTGAGAAGACGTCCTG CTCTTCTCCAGTCATTGTTCTCAAGGATATTTCCGCGGAACATGTGGGAC TCCTCATCAGATATATGTACCTGGGAGTGATCTCTGTCAAGAGGGAGGAT CTCACCACTATTCTGCGCACTGCAAACAGTCTACGCATTCGCGGTCTAAC CACGGACATGTCCGAGGAAAGTGCRGTGGCCCATCAACTCGATGGACAAA CAGCCACCATTCATCCCACTGCACCCCCTTCACCCCCTTTGGTCAAAGAG GGGCGCAAGGGCTATGTCCCCAAAAAGTTGCGTGCACATCCTTCATCCAG TGCTGGGGGTGGCGGCGATAATGATAGCATTGTTTCCAGTCCCCGTGCCT CCAGTTCAGAAGGACCTGTCGAGCCAGAACCCTCTGGTGTCAGCCCTGAT AACGGATCAGACTCTCCCGAAGGTTCCAAGGGGGGTTCCGTGGATGAGGA ACAGCCCTGGAATCTCTCCCAAGGCAAAGAGTCAGGAATCACAATTGGTA AAGCCAAATTCCCTATCCTAGGGAATTATTTAAAAAATGGAAACTCTGCT CAGATCAATGGTGGTAATGCTTCTAAGAAGATACGCACGGGATCCATCGA TGAGCTCCTCGAAACAATTCGAATGAATAACGGCAATCATCATCACATCA ATAATAATACCATATCAAGCAATAACAATGAACAACGTAACTCGGAAGAA ATAACCAGTAACAGTAGTCCTGTTATGTCCAGTCAATCTCTAGCTCAATC CTGGTTGGATCAATTATCTCTTGTCAAAGAAGAACATCACAAATCCAATA AAGAAAACCCGGGGTCCAATTCAACAATGTCTTTATCAGAGGCTCATGGC CTTGCTGGCWTTGACATKGCAGAMCGCATTCGAGCCATGACGGCTCCATT CTCACAAACCTATGGAAATTTGCTCAATAATGTAAGCACAAATTCAATTG CTCAGCTGAATAATAATACAAACGGTGACACTCCTCCACCTCCTTCATTC ACTTCATCTCCAGTACCTAGAAGCAGTGGGGATCTAGGAGAAATCGGGCC CAATGGAAAACCCTCTGTGACATGTGAAGTATGTGGTAAGAAATTGGCGG ATCCTAGCTCATTATATCGACATAGAAAGATCCATAGTGGGGATAAACCT CACAAATGCCCCTTTTGCTCAAGACGATTCATTCAACGCTACAACATGAA ACAACATATGAAGACACATCGAATCGATAGAATAGACAATCCTGAATTAG CASCAGCCATTGCTGCTGGRGATTACTCCATTCCACGCAAAGCCAAGAAT ATATAA
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