EMLSAT00000004826, EMLSAT00000004826-700673 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000004826
Unique Name	EMLSAT00000004826-700673
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s254	supercontig	LSalAtl2s254:382958..388781 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000004826 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000004826	EMLSAG00000004826-687592	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000021147	EMLSAE00000021147-730075	Lepeophtheirus salmonis	exon
EMLSAE00000021148	EMLSAE00000021148-730076	Lepeophtheirus salmonis	exon
EMLSAE00000021149	EMLSAE00000021149-730077	Lepeophtheirus salmonis	exon
EMLSAE00000021150	EMLSAE00000021150-730078	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto777102	auto777102	Lepeophtheirus salmonis	polypeptide
EMLSAP00000004826	EMLSAP00000004826	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s254:382958..388781+

protein sequence of EMLSAP00000004826

>EMLSAP00000004826 ID=EMLSAP00000004826|Name=EMLSAP00000004826|organism=Lepeophtheirus salmonis|type=polypeptide|length=345bp
MELKIMILHITCMLLALSLKTEGQRRKKKDIMFQGDGKIVGGNAVKPNSI
PYQISFQLKSGFHFCGGSIIDKVHMSILEFSMSSLESLKDTVLTAAHCCQ
NFEPEEVQIVAGEHNLSKVSGIEQIANVSFIKYHEDYATKGTNNDICLLK
LESSLEFNDKVDAVNLPRKNKKFKGKVRVSGWGSVTPGGESSDFLRSVDV
KIMSFAKCNLLYLNALDKSMLCAGARRKDSCQGDSGGPLTKKNTLVGVVS
WGIGCASPWFPVMMRFLYILLFLAVAANVGPIMKHSGRIVGGEEVEPNSN
PFHISFQTTGGFYFWGASVMDKDTIITAAHCFDSGRPKDVQIIAS

mRNA from alignment at LSalAtl2s254:382958..388781+

Legend: exonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000004826-700673 ID=EMLSAT00000004826-700673|Name=EMLSAT00000004826|organism=Lepeophtheirus salmonis|type=mRNA|length=5824bp|location=Sequence derived from alignment at LSalAtl2s254:382958..388781+ (Lepeophtheirus salmonis)
CCTTTTTTTGACATTTTTGAAAGATGGAGCTGAAGATTATGATACTACAT
ATTACATGTATGCTGTTGGCTTTGAGTTTAAAAACTGAGGGACAACGAAG
GAAAAAAAAGGACATTATGTTTCAGGGCGATGGAAAAATTGTTGGTGGGA
ATGCAGTAAAACCAAACTCTATCCCATATCAAATTTCCTTTCAATTAAAA
TCTGGATTTCATTTCTGTGGAGGCTCAATCATTGATAAGGTACATATGTC
GATTTTAGAGTTTTCTATGAGTTCATTGGAGTCTTTAAAGGATACAGTGC
TTACAGCTGCACATTGTTGTCAAAATTTTGAGCCAGAAGAAGTTCAAATC
GTTGCTGGGGAGCATAACTTATCAAAAGTGAGTGGGATTGAGCAGATTGC
AAATGTGTCTTTCATCAAATACCATGAAGACTATGCCACTAAAGGAACAA
ATAATGATATTTGTTTGCTCAAATTGGAAAGTTCCTTGGAGTTTAACGAG
TAAGAAATAACATTTTTRTMTTTTTTWATTAWATARTTTTWTTTAAATAT
TNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATAATAAAAATA
ATTGTGTAATGAATGTCTTATTGAGTAAAAATAGATTATGCAATTAATAA
TTATTCGTATCACATAAAGTATAAATCAACCCAATAAAATATTTAAAGTC
TTTAATACATTCATTACGCGATTCTTTTTTATTCTCTTACATTTAATATT
AAATTCACCCATTCAACCCTGTCAGGCTATTTTGATTACATTAGGTAATT
TGTCTAATGTTTCCTTTGACATGTAGCATTAAAGGGCGGCTCTTGAGTAA
ACTATCTGTAAACACATTCTCAGATAAAAAATGTCAAGACTAATTGGAAA
ATTTTGACAATACCTAAAAAATTGTTTTTCTTTTGATGAATTTAATTTAA
AATACAAGAAAACTTATGAAATATGTACAATACTCTTTATTATACCAATA
TTAGTTATAATTAAATATGTGGCAAATTTTTCATGAGAAAAAACATAAGT
AGTTTAGATCAAAGTTTACAAGTTTTTTGATTTATAAAATATACACTTTT
TTATTAATTGAAATTTTTTTCCTTGTATATATAATCCTTTGTTCATAATG
TCAAGAAAAATAAGTTTAAACTAGTTGCAAAAATATTATGATATTATAAA
GTGATATGACTCAATGTCCTATGGCCCCAAAACAGTGTTTTCTAGTCTCT
GTGTTTAGTAATACAAGTTGTCCTATTAATTACTTCGTATTTCTTACATA
AGTAAAGTGGATGCAGTGAATCTGCCAAGGAAAAACAAGAAATTCAAGGG
AAAAGTAAGAGTTTCAGGATGGGGAAGTGTTACTCCTGGAGGAGAATCAT
CCGATTTCTTACGATCAGTTGATGTTAAGATCATGTCATTTGCTAGTGAG
TTATAAAGACAATTATATATGTATTAAATAAACTAACATTGTACATTCTT
AAATAATTTTTAGAGTGTAATCTGCTATATTTAAATGCCTTAGACAAAAG
TATGCTCTGTGCCGGAGCTAGAAGAAAAGACTCATGTCAAGGAGACTCTG
GAGGCCCTTTGACAAAGAAAAATACATTGGTTGGAGTGGTGTCATGGGGA
ATCGGGTGTGCAAGTCCTTGGTTCCCGGGTGTATATACCAAAGTATCTAA
ATTTATTGACTGGATTCAGGCCAATAAATAAACCCTTTGAAGATATCCCC
TGCATTCAATACATCGTATTTTCATTCAAATATTAATTATAATTTGCCTA
ATTATTTTGTATTTTATATTTTTTCATGATCTTTATCTGTAAGGTGAAAC
TGCTTATTTAATAAACCTACAAATGAATTACACAAGTCAACAGCCAAAAA
TAGTATTTTTCTTAGATCTTTATCAAATTTTAATTGTATTTGACGGATTA
ATTATGAATCTGAAATTAGTTTTTTTTTGTATCAAATCTCGTTGTCAAAC
ATTTTAAATATTTTTATCTTCTTTCTAAGTTTGAGTCAAATTTTGAGTGA
GGAAAAAAATATATAATCTACATTCAATAGATCTCATTTCTTCAAAATTT
AAAGAGAACTTCAAATATGGACTTATAGTTCATTACTGATCATTTATTTC
TCAAAAATGCAATTTAAAATGAAAGAAAAACAACAACTTTTGAGACTTTT
CATTTGCTTTCAAGGCAAATCTATAAAAAAATGAAAAACACTCAAAACAA
TCAAATTGAAAAATTTACGCGAGGAGAAGGTTGGACTGAGATATATGATA
CCAAGAATTTAAGACTCTTTGTGACATCAGCTGCTTTTTATAGGATTTTG
GAGGACGAAATAGTATAATTGTTCGAGGGAAGACAGTTTTCAAAATTTAA
CTCAGTATTAGAACAAGGATAATCTTTAAATTATATTTCCGGACATGAAT
TTATCTTATTACGTATTATGTCCCTTAAGTGTTGAATTGAAATAAAGAAT
GATGTATAAAAAGACAGAGGCAGAAGAGAAGATGGGAGAGACAGAGATAC
AGAGAGATATATAGAAACAAAGACGGGATTGATACTTTTTTCTATAATTA
TGGGTCAAAAACAGACTCTTAATGACCATGGAGACCAAAAAACAACAACA
GCAAACAATCTGAGAAATGTGCTTAGTTATTTTATACGTCTGTTTTCTAA
ACTTCAGACTGATCTGTTCGACTGTTTTGGATTCCATGAAGGAAACGTAA
AGAAACTGACCTACTATATACATCAGATTTTTATCTAAACTGACAACAAA
AGTAGTTGGGAATATTTCTGTGAGTACATCAAGGGTTTGTATTGTCAGTC
AAGAGTTGAGGGTGCAAAATAAATAAAAGCACCATTACTCTAATTTTTGA
AATGAACTTATAATTACAGTAAACATTTATAAAATAAATAATTGATTTGA
CAAAATAAAGTATCACATATTAGGAATAAATAGTTGTTAGTCATGGTTTT
TGAATAAACATGAATTCAAAAAATAACTGTAGTGACAACCATTTTTTCCG
TTACTATTATAAAATGTTAAAAGTCACATTAATCAATTACGAATCCTTGA
ATCAAATTAACTATTCAAAATAGTTGAACGAAAAACAAGTCCCTGGTTTT
TAGATACTATCTAAATTTTATTATAAGTAGTTAGATTTTCAAAAAATTTC
CATTAAACTTAATTTTAAACCTTGCAGACGTCATTGCTATTATTAATTTA
CATACACATTAAAGCCATTAAGAATATGTGCTAGTTCTTCCGTTAACTTT
ATTTTTAGTTTGATAGTTTTTTTACCGTTATTTTTTTAACCTTAAAATTT
TATGTTTTATGCGATGTGCTAAGCTCTTTGTTTCGTCAAAAAAGTATGAA
TACTATACATACATATATTATTTCCAATTCAAACACATTGTTGTTGTGTT
CATAAACATAATTTTTTTTAAATAAACTGTTTATGTAATTATTAGATCCT
CATTGCCAGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGAACAGCATTGGCT
GSAACAACTAGGAACAAAAGGGTACAGACGAATTTCATCATGTCTGTAAA
ATAAAATTGGATTTGATGGATAAAGTTTGATCTATTATCAGATCAATGTA
CTTACTGATTGTGTGACTTCTTGAAAAAACTATTTGCCTTATATATGATC
AATAATTAATCGTACTAGAATATCTTATTTGCACAGCTTGATAAAGTTTT
TGATTATCAGAAATACGTTGTAAATTTTTATTTGTCAAATGAAAGAAAAC
ATTTAAGGGAGACCAGGAACACAGTTGCAACACTTTAAATTACTAAGAGC
TATTTTGACTTGGAAACGCCAAAATTGAACCTAACTTTTTCTATCAATTG
CATTTGAGTGCAACCATCAAATTTTTGGAATAGTTCCCATAATATTTACC
TATATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTACTCTTTGGA
TCTGAGCATTACAATATCTCAAACTTCTTCTGAAGGATTGAGTTTTAATT
ACTGATATTATTTGCTCAAAGATTGTAAGGATTTATTTATGCAATTATGG
TATGCCTAAAAGAATTGATTAAGTAAATATAATATAAGTCTGATATAAGT
TGTTTTTGGAGAAAAATTTATTTTAAGATTTCTTATAACATAATAAAAAA
AAATAAKATAWTTTTTKCATTGTCTCTATAAAATAAATTAATTTGATTTA
GACGTCACGCAATCATGAAGTAATTTTAAATCATTAGTTGAAATATTATT
TCGACTTTAAAATTTTATAGTCATGATGAGATTTCTTTATATCCTTTTAT
TCTTGGCTGTTGCTGCCAATGTTGGTCCTATAATGAAGCATAGTGGAAGA
ATTGTCGGAGGAGAAGAAGTTGAACCCAACTCCAATCCCTTCCATATTTC
ATTCCAAACCACTGGAGGATTCTACTTCTGGGGTGCTTCTGTCATGGACA
AGGACACTATTATCACTGCTGCTCATTGCTTTGACAGCGGCAGACCCAAA
GACGTTCAAATCATTGCGTCTTGA

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