EMLSAT00000004828, EMLSAT00000004828-700675 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000004828
Unique NameEMLSAT00000004828-700675
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s254supercontigLSalAtl2s254:397245..398159 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000004828 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000004828EMLSAG00000004828-687594Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000021153EMLSAE00000021153-730081Lepeophtheirus salmonisexon
EMLSAE00000021154EMLSAE00000021154-730082Lepeophtheirus salmonisexon
EMLSAE00000021155EMLSAE00000021155-730083Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto777260auto777260Lepeophtheirus salmonispolypeptide
EMLSAP00000004828EMLSAP00000004828Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000004828

>EMLSAP00000004828 ID=EMLSAP00000004828|Name=EMLSAP00000004828|organism=Lepeophtheirus salmonis|type=polypeptide|length=264bp
MMKFVCTLLFLVVAANAVPPQIKYSESFMKVKSMRHRFGGRIVGGEEVEP
NSIPFQISFQTTGGFHFCGASVMDKDTIITAAHCCDSFYPSEVQVVAGEH
DLFSTSGDEQKIAVSDITYHEKFASHGTNYDVCLLKLKSSLHFNEKVKPI
ALPEKDQEFIGDVVVSGWGTISSSGPPSPVLKAVTVQVVSDEDCSDAYYG
SIDETMICAAAPGKDSCQGDSGGPLAQDGTLVGIVSWGYGCAAPGYPGVY
GKVSKFIDWIAEHQ
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mRNA from alignment at LSalAtl2s254:397245..398159-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000004828-700675 ID=EMLSAT00000004828-700675|Name=EMLSAT00000004828|organism=Lepeophtheirus salmonis|type=mRNA|length=915bp|location=Sequence derived from alignment at LSalAtl2s254:397245..398159- (Lepeophtheirus salmonis)
ATGATGAAATTCGTCTGTACCCTTTTGTTCCTAGTTGTTGCAGCCAATGC
TGTTCCCCCTCAGATCAAATACTCTGAGAGTTTCATGAAAGTCAAGTCCA
TGAGACACAGATTCGGTGGAAGAATCGTCGGAGGAGAAGAAGTTGAACCC
AACTCTATTCCCTTCCAAATTTCATTCCAAACTACAGGAGGATTCCACTT
CTGTGGTGCTTCTGTCATGGACAAGGACACTATCATCACTGCTGCTCATT
GCTGTGACAGCTTCTACCCATCGGAAGTCCAAGTTGTTGCTGGTGAACAC
GATCTCTTTTCTACTAGTGGAGATGAACAAAAGATTGCTGTATCTGATAT
CACATACCACGAGAAGTTTGCATCCCATGGAACCAACTATGACGTTTGTC
TTTTAAAATTGAAGTCATCCTTGCACTTCAACGAGTAAGAACTCTATCAT
GCCATTCCTGTGACAATCRTTAATTTTCATTTTCTTAATAGGAAAGTCAA
GCCTATTGCTCTCCCAGAAAAGGACCAAGAATTCATCGGTGATGTTGTTG
TTTCCGGATGGGGAACTATCTCCTCCAGTGGTCCACCTTCTCCAGTTCTT
AAAGCTGTTACAGTCCAAGTTGTTTCTGATGAAGGTGAGACTCATAATCA
TATTCATATACGATGTTTATGAATTTACATAAGATATTTTATATTAGACT
GTAGCGATGCCTACTATGGATCTATTGATGAGACCATGATCTGTGCTGCT
GCCCCTGGAAAAGACTCCTGCCAAGGCGACTCTGGTGGCCCATTGGCTCA
AGACGGAACCCTCGTTGGYATTGTTTCCTGGGGATATGGTTGTGCTGCTC
CTGGATACCCAGGTGTCTACGGCAAGGTCTCCAAGTTCATTGACTGGATT
GCTGAACACCAATAG
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