EMLSAT00000004977, EMLSAT00000004977-700824 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000004977
Unique NameEMLSAT00000004977-700824
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s260supercontigLSalAtl2s260:1505308..1506673 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000004977 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000004977EMLSAG00000004977-687743Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000021798EMLSAE00000021798-730726Lepeophtheirus salmonisexon
EMLSAE00000021799EMLSAE00000021799-730727Lepeophtheirus salmonisexon
EMLSAE00000021800EMLSAE00000021800-730728Lepeophtheirus salmonisexon
EMLSAE00000021801EMLSAE00000021801-730729Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780799auto780799Lepeophtheirus salmonispolypeptide
EMLSAP00000004977EMLSAP00000004977Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000004977

>EMLSAP00000004977 ID=EMLSAP00000004977|Name=EMLSAP00000004977|organism=Lepeophtheirus salmonis|type=polypeptide|length=262bp
MSGFRFIQKAGGVFVKNFIQQHQLHQAMSPLIAPKWQSNVFFRQLFDQDS
WTYTYLLAXIDSKEALLIDPVIEKANRDLDIIKDYGLTLKYCLNTHVHAD
HITGSGLLKKLSPGVKSIISKQSGADADIHVEEGDKIQLGVIELDVHNTP
GHTNGCITYVSHDSSCAFTGDAILIRGCGRTDFQQGDASRLYHSVWDKIL
SLPDNYLLYPAHDYQGRLFTSVKEEKMYNKRLTKSEDEFIKIMDTLGLAY
PKKIGKSFIDIY
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mRNA from alignment at LSalAtl2s260:1505308..1506673+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000004977-700824 ID=EMLSAT00000004977-700824|Name=EMLSAT00000004977|organism=Lepeophtheirus salmonis|type=mRNA|length=1366bp|location=Sequence derived from alignment at LSalAtl2s260:1505308..1506673+ (Lepeophtheirus salmonis)
AAAKTTACTTATAAAAAAGATTAGCTCGTKTTTCYCACTRSGAGCCACAA
ATCAACCATCAAACGACAACTTAGCGGCTGAAATAATTTCGGTATAGTAT
TTATAAAATACTAATAACTGGAGAAAGACGATTTATAACGAAAAAGTGAA
ATACATGTCCGGATTTCGTTTTATTCAAAAAGCAGGCGGAGTTTTTGTCA
AAAACTTTATTCAACAACATCAGCTTCATCAAGCCATGTCTCCACTCATC
GCTCCCAAGTGGCAATCAAATGTCTTTTTCAGACAAGTATAAATATAGAT
ATTTAATATTCTAATTATAAAATATTAATGTTAAAATCTTTTCCATTTCA
ATACTTTTTTGTAGCTCTTTGATCAGGACTCTTGGACTTATACGTATTTA
TTGGCTGRCATTGATTCCAAGGAGGCATTATTAATCGATCCTGTCATTGA
AAAGGCTAATAGGGATTTGGATATTATCAAGGACTACGGATTGACCCTCA
AATATTGCCGTAAATACTATATATATTTTACATTTAGTCATACAAAAAGA
GTTAAATACTTTCCAAAAATATTGAATATTACATAACTCGAAACTTATTG
CTCWTTTTCATGTTMCCTTTTCTTTGTTCTTTATATATTTCTAATGTATC
CATAATCATTATTATATCTTTTCCCTCTCTTTAGTTAACACCCATGTACA
TGCTGATCATATTACTGGATCCGGACTTCTCAAAAAGCTTAGTCCAGGTG
TCAAATCCATTATTTCGAAGCAAAGTGGAGCTGATGCAGATATTCATGTA
GAAGAAGGAGATAAGATCCAATTGGGGGTCATTGAATTAGATGTTCATAA
TACACCTGGGCATACTAATGGATGTATCACTTACGTTTCTCATGATAGTT
CGTGTGCCTTCACTGGAGACGCCATTTTGATAAGAGGCTGTGGACGTACA
GATTTTCAACAAGGAGACGCTTCAAGGCTATATCACTCCGTTTGGGACAA
AATACTTTCCCTTCCAGATAATTATTTGTTGTATCCTGCTCATGACTATC
AAGGTAAGTAAATAAGTTTCTTAAAATATCATATGGTAATTTGCTTTACT
TAAGGACGACTATTCACTTCCGTGAAGGAAGAGAAGATGTACAACAAAAG
ATTAACAAAAAGTGAAGATGAATTTATCAAGATAATGGATACTCTTGGAT
TAGCTTATCCTAAAAAAATTGGTAAGTCATTCATAGATATTTACTAACTC
ATACACTTTATTGCAATTAAGAAATATGTCTACAATTAATTATTAAGGTT
ATGTGGACCAAATTTTATTTATAATTGGGTTTACATTGAAGATCAGCTAC
AGCATGATATATTTTT
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