EMLSAT00000005240, EMLSAT00000005240-701087 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000005240
Unique NameEMLSAT00000005240-701087
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s278supercontigLSalAtl2s278:375275..377680 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000005240 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000005240EMLSAG00000005240-688006Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000022913EMLSAE00000022913-731841Lepeophtheirus salmonisexon
EMLSAE00000022914EMLSAE00000022914-731842Lepeophtheirus salmonisexon
EMLSAE00000022915EMLSAE00000022915-731843Lepeophtheirus salmonisexon
EMLSAE00000022916EMLSAE00000022916-731844Lepeophtheirus salmonisexon
EMLSAE00000022917EMLSAE00000022917-731845Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto777015auto777015Lepeophtheirus salmonispolypeptide
EMLSAP00000005240EMLSAP00000005240Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000005240

>EMLSAP00000005240 ID=EMLSAP00000005240|Name=EMLSAP00000005240|organism=Lepeophtheirus salmonis|type=polypeptide|length=690bp
MIQDAVDEVFQVSSIQKARIQDNETVSVLMCNSKGDSKVFSCLNKLYELG
NDSTWSKSEEMFQHGNTVFLDDSDWPNSKLELVKDDSKYYLLMTPLIEGN
ETTIDLTDGDSLRKDDTILSLEYNVESSEIACLIERKRHVFVGIFNIVSR
TWSRVKSWPEEWTPEEVFWNLESELMGVAFRNDPFRQSRIFVTKRTKNKN
KFQFLSPINTIVSHPRLTPDGKGLIYFQSDKNGTVIKFNPDVFANSKLSG
DSSVLITDRIFNDGKVYGIYPANVPLRAFSSDGSKFYLSVHMESEVYLIV
VHLLREGDDKIDVFDGNNLRLLDVYEDNLLLSKSDWNEFPKVFMANQAAS
SPDKDKGNKVEFKLVTDDVDITREKRYGWXKSGKSFFEKFSANYIAGTPL
RPQMNKNTEIPIIVVLHGGPNTVKTSEHDRLINGLLASEFAVISINYRGS
LGMCNESISSIRGYKMKNLMKEVKDGIADAVESSKSLDALRVGIIGIGFG
GLIALELSNYHSKFEHVVLINPIVDLPQMRSSSNPEWVYDVLGMNYSYPQ
LPSMDFFNKSWEMSPLKFSKEYRRNYFMVLSEENKWILPETQGLMWHRFA
GKPNTSRPVILQEEVEENPFVKTLHPKGVKIVLNKIIHYFHDIWENDTEH
CFVEEKEQIIGQRYASTAXSISQSSLXITLFILFCSYIRA
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mRNA from alignment at LSalAtl2s278:375275..377680-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000005240-701087 ID=EMLSAT00000005240-701087|Name=EMLSAT00000005240|organism=Lepeophtheirus salmonis|type=mRNA|length=2406bp|location=Sequence derived from alignment at LSalAtl2s278:375275..377680- (Lepeophtheirus salmonis)
AGTATCTCGAGTGTTTACTCCTTTATTGATCCTAAATGTTTAAAAAATAG
ACGAATCGAAAGGAATCACATGATTCAAGATGCAGTGGACGAAGTATTCC
AAGTATCTAGCATTCAAAAGGCTAGAATTCAAGTAAGGATTTATGTCTTC
TACCTTATTCAATCATTATTTATACTCCCCTTCATATTAGGATAACGAGA
CTGTAAGTGTTCTTATGTGCAACTCTAAAGGAGATAGCAAGGTTTTTAGC
TGTCTAAACAAGCTCTATGAGCTTGGAAACGACTCTACTTGGTCAAAATC
TGAAGAAATGTTTCAACATGGGAATACAGTCTTTTTAGATGATTCTGACT
GGCCGAATTCCAAGCTTGAGCTAGTTAAAGATGACTCCAAGTATTATTTA
TTGATGACTCCCTTAATAGAAGGAAATGAAACAACTATTGATCTCACAGA
TGGTGATAGTTTAAGAAAAGATGATACCATACTCTCCCTTGAATACAATG
TTGAGTCCAGCGAGATTGCTTGTCTAATTGAAAGAAAACGACACGTCTTC
GTTGGAATATTTAATATTGTATCTAGAACATGGAGCCGAGTCAAGTCATG
GCCGGAGGAATGGACCCCCGAAGAAGTATTTTGGAATTTAGAGTCCGAGT
TGATGGGCGTTGCCTTCAGAAATGATCCTTTTAGACAGAGTCGAATTTTT
GTTACTAAAAGAACTAAGAATAAGAATAAATTTCAATTTTTGAGGTAGTT
AACGGAATATAGAAAACTATTGTTTTATTCTTAATATCTATACATTATTT
CAATTCTTCTTTCCAGCCCCATTAATACTATTGTAAGTCATCCAAGACTA
ACTCCCGACGGCAAAGGCTTAATTTATTTTCAATCTGACAAAAATGGAAC
TGTTATTAAATTCAATCCGGATGTGTTTGCCAATTCAAAGTTATCTGGAG
ATTCAAGTGTTCTTATAACTGATCGAATTTTCAATGATGGAAAAGTGTAC
GGAATATATCCAGCAAATGTTCCCTTAAGAGCATTCTCTTCAGATGGATC
CAAGTTTTATTTAAGCGTACACATGGAATCAGAGGTTTACTTAATTGTGG
TTCATTTATTACGTGAAGGGGATGACAAAATTGACGTGTTTGATGGAAAT
AATTTGAGGTTATTAGATGTGTATGAAGACAACTTGCTTCTTTCCAAGTC
AGATTGGAATGAGTTCCCCAAAGTATTTATGGCAAATCAAGCTGCCTCTT
CACCAGATAAAGATAAGGGAAATAAAGTTGAATTCAAACTAGTGACAGAT
GATGTGGATATAACCAGAGAAAAAAGATATGGATGGGMAAAATCTGGCAA
GAGCTTTTTCGAAAAATTCTCTGCCAATTACATAGCTGGAACTCCTTTAC
GGCCTCAAATGAACAAAAATACTGAAATCCCAATCATTGTAGTTCTCCAT
GGTGGGCCAAACACTGTCAAAACATCCGAACACGATCGCCTTATTAACGG
TTTGTTAGCATCCGAATTCGCTGTAATCTCCATCAACTACAGAGGCAGTC
TTGGAATGTGTAATGAAAGTATTTCAAGCATAAGAGGATATAAAATGAAG
GTAAAGTACATACCAAGTCTAGTTTGTCCAAGTCACCGTTTTCATACATA
GATTAACAATTTATTTTGTATGTATTTAGAACCTAATGAAGGAGGTCAAA
GATGGAATAGCCGATGCTGTGGAGTCTAGCAAATCATTGGATGCGCTTAG
AGTTGGAATTATTGGTATTGGATTCGGTGGTTTAATTGCTCTTGAGTTGA
GCAATTATCATTCAAAGTTCGAGCATGTAGTTCTCATTAATCCCATTGTT
GACTTACCTCAAATGCGAAGTTCTTCAAATCCAGAATGGGTCTATGATGT
TTTAGGAATGAATTATTCATATCCTCAGCTTCCAAGTATGGATTTTTTCA
ACAAATCTTGGGAAATGTAAGTCTATTTTTGTCACTCATCATACTTCATC
ATCTATTCTCTCTCCCTTAAGGTCACCATTAAAATTCTCCAAAGAGTATC
GCCGCAATTACTTTATGGTTCTTTCGGAAGAAAACAAGTGGATACTTCCA
GAAACTCAAGGTTTAATGTGGCATCGCTTTGCGGGAAAGCCAAATACTTC
TCGTCCAGTCATTCTCCAAGAAGAGGTTGAAGAAAATCCCTTTGTCAAAA
CTCTACATCCTAAAGGAGTCAAAATCGTATTAAACAAAATTATTCATTAC
TTTCATGATATCTGGGAGAATGATACAGAACATTGTTTTGTTGAAGAAAA
GGAACAAATCATTGGACAGAGATATGCCTCAACGGCAGSTTCAATTTCTC
AAAGCTCTCTCKTTATTACTCTTTTCATTCTTTTCTGCAGTTACATTCGC
GCTTAA
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